| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is exeN [H]
Identifier: 145300653
GI number: 145300653
Start: 4078024
End: 4078782
Strand: Direct
Name: exeN [H]
Synonym: ASA_3785
Alternate gene names: 145300653
Gene position: 4078024-4078782 (Clockwise)
Preceding gene: 145300652
Following gene: 145300655
Centisome position: 86.72
GC content: 62.58
Gene sequence:
>759_bases ATGAAGAAAAAAGTACTGATCGCCGCCCTGTTTCTGGTGGCCTATCTCGGTTTTCTGTTGGTGAAGCTGCCCGCTACTCT GGTGGTGCGCCATCTGCCGTTGCCGCCCAACCTGGTGCAGCTGGAAGGGGTGAGCGGTACCCTCTGGAGCGGCCAGGTCG CCCGGCTGCAATATGCCAGCGAGTCGCTGACCCAGCTGCGCTGGGAGCTCAACGGCTGGTCACTGCTGCGCTTCGCCCCT GAGGTCTTTCTGCGTTTCGGCGATCGCAGCGGCCTCAATGGCCAGGGTGTGGTCGGCTGGAACGGCGCCGCCTTTGGTCG CGACATTACCCTCAATGTGCCCGCACCCTGGGTACTGGATCGGGTGCCCATGCGGCTGCCGTTCCCGCTGACGGTGGCGG GTCAGTTGCAGCTCAAGGTCGATCAGTTTGCCCAGGGCAACCCCTGGTGTGACAACCTTTACGGCAATCTCTATTGGTAT GGCGCCGATGCAGACACCTCGGCCGGCAAGCTGCCGCTGGGTGATCCCGAGATCAAGCTGACCTGCATCGACTCCCGTCT GGTGGCCGAACTCAAGCAGAGCTCGGAGGCGGTGCAGGTGATGGGCAAACTGGAACTGCAGGCCAATCGCCAGTACCTGT TCCAGGGCTCTCTCAAACCTGGCCCTGAGCTGCCGGAAGAGATGAAGCAGGGATTGCCCTTCCTCGGTCAACCCGACGGT CAGGGCCGTTTCCCGCTGCGCTACCAGGGCCGTATCTGA
Upstream 100 bases:
>100_bases TGACATCCAGCGGGCTGAGTGCCGCCGAGTGCCAGGTATTTCGTCCCTGTGGGGCTCCGGGCTTGGTCAAGGCCAGACAT TTTCAGTTGAGTCATTTTCT
Downstream 100 bases:
>100_bases CGATATTGTCTGGTGTTGTGGACGCATAATGAAAATAACCCCGCTTCGGCGGGGTTATGTCGTTATGGGGTTTGTATGTC GCCAACCGGCGCCGTGATCA
Product: general secretion pathway protein N
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKKKVLIAALFLVAYLGFLLVKLPATLVVRHLPLPPNLVQLEGVSGTLWSGQVARLQYASESLTQLRWELNGWSLLRFAP EVFLRFGDRSGLNGQGVVGWNGAAFGRDITLNVPAPWVLDRVPMRLPFPLTVAGQLQLKVDQFAQGNPWCDNLYGNLYWY GADADTSAGKLPLGDPEIKLTCIDSRLVAELKQSSEAVQVMGKLELQANRQYLFQGSLKPGPELPEEMKQGLPFLGQPDG QGRFPLRYQGRI
Sequences:
>Translated_252_residues MKKKVLIAALFLVAYLGFLLVKLPATLVVRHLPLPPNLVQLEGVSGTLWSGQVARLQYASESLTQLRWELNGWSLLRFAP EVFLRFGDRSGLNGQGVVGWNGAAFGRDITLNVPAPWVLDRVPMRLPFPLTVAGQLQLKVDQFAQGNPWCDNLYGNLYWY GADADTSAGKLPLGDPEIKLTCIDSRLVAELKQSSEAVQVMGKLELQANRQYLFQGSLKPGPELPEEMKQGLPFLGQPDG QGRFPLRYQGRI >Mature_252_residues MKKKVLIAALFLVAYLGFLLVKLPATLVVRHLPLPPNLVQLEGVSGTLWSGQVARLQYASESLTQLRWELNGWSLLRFAP EVFLRFGDRSGLNGQGVVGWNGAAFGRDITLNVPAPWVLDRVPMRLPFPLTVAGQLQLKVDQFAQGNPWCDNLYGNLYWY GADADTSAGKLPLGDPEIKLTCIDSRLVAELKQSSEAVQVMGKLELQANRQYLFQGSLKPGPELPEEMKQGLPFLGQPDG QGRFPLRYQGRI
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP N family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022792 - InterPro: IPR000645 [H]
Pfam domain/function: PF01203 GSPII_N [H]
EC number: NA
Molecular weight: Translated: 27928; Mature: 27928
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS01142 T2SP_N
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKVLIAALFLVAYLGFLLVKLPATLVVRHLPLPPNLVQLEGVSGTLWSGQVARLQYAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCEEEEHHHH ESLTQLRWELNGWSLLRFAPEVFLRFGDRSGLNGQGVVGWNGAAFGRDITLNVPAPWVLD HHHHHHHHCCCCEEHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCEEEEECCCCHHHH RVPMRLPFPLTVAGQLQLKVDQFAQGNPWCDNLYGNLYWYGADADTSAGKLPLGDPEIKL CCCCCCCCCEEECCEEEEEEECCCCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCEEE TCIDSRLVAELKQSSEAVQVMGKLELQANRQYLFQGSLKPGPELPEEMKQGLPFLGQPDG EEECHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCC QGRFPLRYQGRI CCCCCEEECCCC >Mature Secondary Structure MKKKVLIAALFLVAYLGFLLVKLPATLVVRHLPLPPNLVQLEGVSGTLWSGQVARLQYAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCEEEEHHHH ESLTQLRWELNGWSLLRFAPEVFLRFGDRSGLNGQGVVGWNGAAFGRDITLNVPAPWVLD HHHHHHHHCCCCEEHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCCEEEEECCCCHHHH RVPMRLPFPLTVAGQLQLKVDQFAQGNPWCDNLYGNLYWYGADADTSAGKLPLGDPEIKL CCCCCCCCCEEECCEEEEEEECCCCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCEEE TCIDSRLVAELKQSSEAVQVMGKLELQANRQYLFQGSLKPGPELPEEMKQGLPFLGQPDG EEECHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCC QGRFPLRYQGRI CCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]