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The map label for this gene is fimF [C]

Identifier: 145300598

GI number: 145300598

Start: 4022309

End: 4022860

Strand: Direct

Name: fimF [C]

Synonym: ASA_3730

Alternate gene names: 145300598

Gene position: 4022309-4022860 (Clockwise)

Preceding gene: 145300597

Following gene: 145300607

Centisome position: 85.54

GC content: 55.25

Gene sequence:

>552_bases
ATGTTCAGGACGTTCTGGATAGGGTTGTTGCTTTGCCCATCACTGGCAGTGATGGCTGCACCACGAGCGGGTGAAGACCT
GGAGTTATTGGGCAATACACTTCATCTTCATGGCCGAATTATTGACCAGCCATGCCTGGTATCACCGGAGTCAGCCGATC
AGTCGGTCGACATGGGGGTGGTTGACGTCAGGGAGCTCTATTCAGCCGGTGCCGGGGCCCAGGTGCCTTTTGTTATCCGC
CTGACCAACTGCAAGCCAGGTATTTTCCGCATGGCCAAGGTGACCTTCAGCGGTTCGGCAGATCAGCAGATGAGCGGTGC
TCTGGCTTTTTCCGCAGGTTCTGCCAAGGGGGCGGGTATCCGGTTGTATGACGCCACTCAATCCCCGCTGGATTTGGGTA
CCCCTTCCCGTGGCTATGTACTGGGCAACTCAACAGAGAACGAGCTGAATTTTTTCGCTCGGGTTGAAGGCCACCCGGAT
GCCATCGCCGCAAGGAATATCAAACCTGGCGATTATACCGCCGTGGCCAATTTCATTGTCGCCTATGAATAA

Upstream 100 bases:

>100_bases
TCATTGCTGCCCCTATATCACCGGTTGGTGCAGATATAGCCGCGGGTGATTTTTACGCCACAGCAACTATCGTTGCCGAA
TTCCAGTGAGGGAAAGTCAC

Downstream 100 bases:

>100_bases
CTCAAGGGTCATTGCGCTGGATGACCTTCAAGTTTTCTCTGCTGGGCCAGGAGAGAACGCCCCCCATATAGCTGGATAAA
TATATTCCACCCGGCAGTTG

Product: type I pilus assembly protein FimF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MFRTFWIGLLLCPSLAVMAAPRAGEDLELLGNTLHLHGRIIDQPCLVSPESADQSVDMGVVDVRELYSAGAGAQVPFVIR
LTNCKPGIFRMAKVTFSGSADQQMSGALAFSAGSAKGAGIRLYDATQSPLDLGTPSRGYVLGNSTENELNFFARVEGHPD
AIAARNIKPGDYTAVANFIVAYE

Sequences:

>Translated_183_residues
MFRTFWIGLLLCPSLAVMAAPRAGEDLELLGNTLHLHGRIIDQPCLVSPESADQSVDMGVVDVRELYSAGAGAQVPFVIR
LTNCKPGIFRMAKVTFSGSADQQMSGALAFSAGSAKGAGIRLYDATQSPLDLGTPSRGYVLGNSTENELNFFARVEGHPD
AIAARNIKPGDYTAVANFIVAYE
>Mature_183_residues
MFRTFWIGLLLCPSLAVMAAPRAGEDLELLGNTLHLHGRIIDQPCLVSPESADQSVDMGVVDVRELYSAGAGAQVPFVIR
LTNCKPGIFRMAKVTFSGSADQQMSGALAFSAGSAKGAGIRLYDATQSPLDLGTPSRGYVLGNSTENELNFFARVEGHPD
AIAARNIKPGDYTAVANFIVAYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786938, Length=163, Percent_Identity=30.6748466257669, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1789422, Length=160, Percent_Identity=29.375, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19465; Mature: 19465

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTFWIGLLLCPSLAVMAAPRAGEDLELLGNTLHLHGRIIDQPCLVSPESADQSVDMGV
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEEEECCCCEECCCCCCCCCCCCH
VDVRELYSAGAGAQVPFVIRLTNCKPGIFRMAKVTFSGSADQQMSGALAFSAGSAKGAGI
HHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCE
RLYDATQSPLDLGTPSRGYVLGNSTENELNFFARVEGHPDAIAARNIKPGDYTAVANFIV
EEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCEEECCCCCCCHHEEEEEEE
AYE
EEC
>Mature Secondary Structure
MFRTFWIGLLLCPSLAVMAAPRAGEDLELLGNTLHLHGRIIDQPCLVSPESADQSVDMGV
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEEEECCCCEECCCCCCCCCCCCH
VDVRELYSAGAGAQVPFVIRLTNCKPGIFRMAKVTFSGSADQQMSGALAFSAGSAKGAGI
HHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCE
RLYDATQSPLDLGTPSRGYVLGNSTENELNFFARVEGHPDAIAARNIKPGDYTAVANFIV
EEEECCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCEEECCCCCCCHHEEEEEEE
AYE
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890624 [H]