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The map label for this gene is fimC [H]

Identifier: 145300595

GI number: 145300595

Start: 4017991

End: 4020522

Strand: Direct

Name: fimC [H]

Synonym: ASA_3727

Alternate gene names: 145300595

Gene position: 4017991-4020522 (Clockwise)

Preceding gene: 145300594

Following gene: 145300596

Centisome position: 85.45

GC content: 53.59

Gene sequence:

>2532_bases
ATGAGCGTTTCAACATCAAACTCTGTTAGAACACATTATCTAAAAATGGCTTTTATGCTATGCGTGCCTTGCCTATTGGC
TGTGGCAGATAACGCGTTGGCAGAAACGGAGTTTAATATTGATGCGCTTGATCTGGACGAGCGAACCAAGATAGACCTTT
CCCAGTTTGCAGATGAAGGTTATATCCTGCCGGGTGATTACTATCTTGAGATTGAGGTCAACAAGAACAAGCTGCCACTC
CAGAAAATCCCTTTTTATGAAGTGGAAGACGGCAAGGGAAAGGGCGGCGTTGCCTGCTTGCCTCAGGATCTTGTCCCCAG
GATGGCGCTGACGGATGAAGCCATCGCCAAGATTGACAGCTGGCATCAGGGTCAGTGTGCCAACCTCCTGGCGCTGGATG
GGGTCATCATCTCCAATGATATTGGTAACGGCTTGCTGAGGATTGCCGTCCCCCAGGCCTGGCTGAAATACAGTGACCCC
AACTGGATTCCGCCCGAGCAGTGGGACGTCGGCGTCACTGGTCTGATGCTGGATTACAACCTCAATGCCCAGGTCAATGA
AGGGCGCGACTACTCCAACAGCAACCTCAGCAGTTACGGTACCCTGGGGGCGAACTACGGTCCCTGGCGCCTGCGTGGCG
ATTACCAGGCCAGCGCTTATTGGGGGGATGACGAGCGGTCGTCAGCCGAGCTTAACCGTCTCTACGCATACCGGCCTCTG
TCGACCATGGCCGCCAAGCTGACCGTGGGCGAACAACAGCTCAACTCCCAATTGATCGATGGTTTTCGTTATACAGGTGT
CAATCTGGCCAATGATGAGCGCATGTTGCCGCCCAGCTTGCAAGGCTATGCCCCCGAGGTGAGCGGCATCGCCAAGACCA
ACGCCAAAGTCACCATCTCCCAGTCTGGCCGCATCATTTATGAGACCAACGTGCCTGCCGGCCCATTTCGTATTCAGGGA
TTGGACAGTTCTGTGCGTGGTCGCCTCGATGTGCGGGTGGAAGAGCAGGATGGTAGCGTCAGCTCTTTTCAGGTGGATAC
GGCAACCGTGCCTTATCTGACCCGGCCAGGGTATGTTCGCTACAACATCTCGGTCGGCGCCCCATCAGAACTGGGTGACT
CTGCTCACGATATCCATGGTCCTGGTTTTGTGACGGGGGACTTTTCATGGGGGGTGGCGAACTCCTGGTCTCTTTATGGT
GGTAGTCTGGTTGCTGGCGAATATAACTCCATGGGCCTGGGGATTGGTCGCGACCTGTATGCATTCGGTGCTATTTCTGC
TGACTTGACCCAATCCATTGCGAAATTACCAGGTTTATCTACCAAGATTGGCCAGTCATTTCGGTTGAACTATGCCAAGC
AGTTCGATGAATACAACAGCGCCATCACCTTTGCGGGTTATCGTTTCTCGCAACATAACTTCATGACAATGTCGCAGTTC
CTGAGTAACAAGGATCGACTGGAAAATAATAACGTTGCATCGAGTGATGATTACAATACCTGGGGTGATAAAGAGCTATA
TACCATTACTGCCAACAAGACATTCTGGGCTGATGATGCCGCCAAGGCATTGACCATGTATATGGATTACACCCATAGAA
CCTATTGGAATCACGATGCGGAAGATCGTTACGGCCTGTCCATCAACAAGAATGTGAATATTGGCAGTTTCAAGGATGTC
TCTCTCTATTTGTCTGCTTACAAGACCAAGACAGAGAATTATGAGGATGACAAGAGTGTCATGCTGACGGTCAGCATGCC
GATCGGGGACCGGAAGAGTGCGGGATACAGCGTGCAGTCTTCCAACGGCAAGGTCACCCACCTGGCAACCTATCAAGATT
ACAGCCGGCCGGATGATACCTATCAGCTGGGGGCCGGGGTGCAGAGCAATGGTCATGCGGTCGCGCGAGGTTATTACAAC
CACAACAGTGACATCGGCGCCGTCAGCCTCAATGCCTACAGCGTACAGAGCGAATACACCTCGGTCGGTGCCAGCATGCG
GGGCGGTTTGACGGCGACCGAACATGGCGCCGCCTTGCATCAGGCGACCCGACGTGGAGGAACCCGCATGATGGTCGATA
CCGGCAAGGTCGCCGATGTCTCTTTCAATAATGGGCGTGCGGTGACGAACCGGTTTGGCGTGGCCGTGATCAGCGACATG
ACCGATTATCGCAAGAGCGATACCCGTATCGACGTGGACCAGCTGAGCGATGACATAGATGCCATGAATGCCATCAAGCA
GGGAACCCTGACGGAAGGTGCGATTGGGTATAATGCCTTTGAAATTGCCCAGGGCTTCAAGTTGCTGGCCAGCGTCAGGC
TGCCCAATGGTTCCTATCCGCCCTTCGGTGCGACCGTCGTCAATGACGCCGGACGGGTACTCTCCGTCGTGGATGAGGAT
GGCCTAGTCTATCTGGCGGGAGTAAAACCGGATGAATCGTTTGAACTTTCCTGGGGTGGTGCCCGTCAGTGCAAGATAGC
GGCACCGCACGAAGTAACCGATCTGTCGATGAAGACGCTCACTTGTAAGTAA

Upstream 100 bases:

>100_bases
AATACAGCCCTATTTGAACTCAATTATATGTAAGCAACCCGATTGCTTAGTGTAGATACCTCATTATGTGAGACCGTTAT
GTTACCCCTAGAGTGAATAT

Downstream 100 bases:

>100_bases
TGGGAACCCGATGAAAAAGCTGCTCTCTTTTACCTGTCTGGCCGTACTGGGTATGACGTCACTGAACGTCAGTGCCGCAA
TTGTGCTGGATCGTACTCGC

Product: type I pilus usher protein FimC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 843; Mature: 842

Protein sequence:

>843_residues
MSVSTSNSVRTHYLKMAFMLCVPCLLAVADNALAETEFNIDALDLDERTKIDLSQFADEGYILPGDYYLEIEVNKNKLPL
QKIPFYEVEDGKGKGGVACLPQDLVPRMALTDEAIAKIDSWHQGQCANLLALDGVIISNDIGNGLLRIAVPQAWLKYSDP
NWIPPEQWDVGVTGLMLDYNLNAQVNEGRDYSNSNLSSYGTLGANYGPWRLRGDYQASAYWGDDERSSAELNRLYAYRPL
STMAAKLTVGEQQLNSQLIDGFRYTGVNLANDERMLPPSLQGYAPEVSGIAKTNAKVTISQSGRIIYETNVPAGPFRIQG
LDSSVRGRLDVRVEEQDGSVSSFQVDTATVPYLTRPGYVRYNISVGAPSELGDSAHDIHGPGFVTGDFSWGVANSWSLYG
GSLVAGEYNSMGLGIGRDLYAFGAISADLTQSIAKLPGLSTKIGQSFRLNYAKQFDEYNSAITFAGYRFSQHNFMTMSQF
LSNKDRLENNNVASSDDYNTWGDKELYTITANKTFWADDAAKALTMYMDYTHRTYWNHDAEDRYGLSINKNVNIGSFKDV
SLYLSAYKTKTENYEDDKSVMLTVSMPIGDRKSAGYSVQSSNGKVTHLATYQDYSRPDDTYQLGAGVQSNGHAVARGYYN
HNSDIGAVSLNAYSVQSEYTSVGASMRGGLTATEHGAALHQATRRGGTRMMVDTGKVADVSFNNGRAVTNRFGVAVISDM
TDYRKSDTRIDVDQLSDDIDAMNAIKQGTLTEGAIGYNAFEIAQGFKLLASVRLPNGSYPPFGATVVNDAGRVLSVVDED
GLVYLAGVKPDESFELSWGGARQCKIAAPHEVTDLSMKTLTCK

Sequences:

>Translated_843_residues
MSVSTSNSVRTHYLKMAFMLCVPCLLAVADNALAETEFNIDALDLDERTKIDLSQFADEGYILPGDYYLEIEVNKNKLPL
QKIPFYEVEDGKGKGGVACLPQDLVPRMALTDEAIAKIDSWHQGQCANLLALDGVIISNDIGNGLLRIAVPQAWLKYSDP
NWIPPEQWDVGVTGLMLDYNLNAQVNEGRDYSNSNLSSYGTLGANYGPWRLRGDYQASAYWGDDERSSAELNRLYAYRPL
STMAAKLTVGEQQLNSQLIDGFRYTGVNLANDERMLPPSLQGYAPEVSGIAKTNAKVTISQSGRIIYETNVPAGPFRIQG
LDSSVRGRLDVRVEEQDGSVSSFQVDTATVPYLTRPGYVRYNISVGAPSELGDSAHDIHGPGFVTGDFSWGVANSWSLYG
GSLVAGEYNSMGLGIGRDLYAFGAISADLTQSIAKLPGLSTKIGQSFRLNYAKQFDEYNSAITFAGYRFSQHNFMTMSQF
LSNKDRLENNNVASSDDYNTWGDKELYTITANKTFWADDAAKALTMYMDYTHRTYWNHDAEDRYGLSINKNVNIGSFKDV
SLYLSAYKTKTENYEDDKSVMLTVSMPIGDRKSAGYSVQSSNGKVTHLATYQDYSRPDDTYQLGAGVQSNGHAVARGYYN
HNSDIGAVSLNAYSVQSEYTSVGASMRGGLTATEHGAALHQATRRGGTRMMVDTGKVADVSFNNGRAVTNRFGVAVISDM
TDYRKSDTRIDVDQLSDDIDAMNAIKQGTLTEGAIGYNAFEIAQGFKLLASVRLPNGSYPPFGATVVNDAGRVLSVVDED
GLVYLAGVKPDESFELSWGGARQCKIAAPHEVTDLSMKTLTCK
>Mature_842_residues
SVSTSNSVRTHYLKMAFMLCVPCLLAVADNALAETEFNIDALDLDERTKIDLSQFADEGYILPGDYYLEIEVNKNKLPLQ
KIPFYEVEDGKGKGGVACLPQDLVPRMALTDEAIAKIDSWHQGQCANLLALDGVIISNDIGNGLLRIAVPQAWLKYSDPN
WIPPEQWDVGVTGLMLDYNLNAQVNEGRDYSNSNLSSYGTLGANYGPWRLRGDYQASAYWGDDERSSAELNRLYAYRPLS
TMAAKLTVGEQQLNSQLIDGFRYTGVNLANDERMLPPSLQGYAPEVSGIAKTNAKVTISQSGRIIYETNVPAGPFRIQGL
DSSVRGRLDVRVEEQDGSVSSFQVDTATVPYLTRPGYVRYNISVGAPSELGDSAHDIHGPGFVTGDFSWGVANSWSLYGG
SLVAGEYNSMGLGIGRDLYAFGAISADLTQSIAKLPGLSTKIGQSFRLNYAKQFDEYNSAITFAGYRFSQHNFMTMSQFL
SNKDRLENNNVASSDDYNTWGDKELYTITANKTFWADDAAKALTMYMDYTHRTYWNHDAEDRYGLSINKNVNIGSFKDVS
LYLSAYKTKTENYEDDKSVMLTVSMPIGDRKSAGYSVQSSNGKVTHLATYQDYSRPDDTYQLGAGVQSNGHAVARGYYNH
NSDIGAVSLNAYSVQSEYTSVGASMRGGLTATEHGAALHQATRRGGTRMMVDTGKVADVSFNNGRAVTNRFGVAVISDMT
DYRKSDTRIDVDQLSDDIDAMNAIKQGTLTEGAIGYNAFEIAQGFKLLASVRLPNGSYPPFGATVVNDAGRVLSVVDEDG
LVYLAGVKPDESFELSWGGARQCKIAAPHEVTDLSMKTLTCK

Specific function: Involved in the export and assembly of PMF fimbrial subunits across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=845, Percent_Identity=35.3846153846154, Blast_Score=501, Evalue=1e-142,
Organism=Escherichia coli, GI1790772, Length=886, Percent_Identity=28.6681715575621, Blast_Score=296, Evalue=3e-81,
Organism=Escherichia coli, GI1787172, Length=863, Percent_Identity=27.3464658169177, Blast_Score=266, Evalue=4e-72,
Organism=Escherichia coli, GI1789533, Length=857, Percent_Identity=27.7712952158693, Blast_Score=265, Evalue=1e-71,
Organism=Escherichia coli, GI1786744, Length=874, Percent_Identity=26.8878718535469, Blast_Score=263, Evalue=3e-71,
Organism=Escherichia coli, GI1786332, Length=842, Percent_Identity=25.6532066508314, Blast_Score=253, Evalue=5e-68,
Organism=Escherichia coli, GI1788427, Length=857, Percent_Identity=27.6546091015169, Blast_Score=237, Evalue=3e-63,
Organism=Escherichia coli, GI1789610, Length=828, Percent_Identity=24.6376811594203, Blast_Score=115, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92312; Mature: 92180

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSTSNSVRTHYLKMAFMLCVPCLLAVADNALAETEFNIDALDLDERTKIDLSQFADEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCHHHHCCCC
YILPGDYYLEIEVNKNKLPLQKIPFYEVEDGKGKGGVACLPQDLVPRMALTDEAIAKIDS
EECCCCEEEEEEECCCCCCHHHCCEEEECCCCCCCCEEECCHHHCCHHHHCHHHHHHHCC
WHQGQCANLLALDGVIISNDIGNGLLRIAVPQAWLKYSDPNWIPPEQWDVGVTGLMLDYN
CCCCCCCCEEEECCEEEECCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCEEEEEEEEC
LNAQVNEGRDYSNSNLSSYGTLGANYGPWRLRGDYQASAYWGDDERSSAELNRLYAYRPL
CCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCHHHHHEEEECCH
STMAAKLTVGEQQLNSQLIDGFRYTGVNLANDERMLPPSLQGYAPEVSGIAKTNAKVTIS
HHHHEEEEECHHHHHHHHHCCEEECCCEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEE
QSGRIIYETNVPAGPFRIQGLDSSVRGRLDVRVEEQDGSVSSFQVDTATVPYLTRPGYVR
CCCCEEEECCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEECEECCEEECCCEEE
YNISVGAPSELGDSAHDIHGPGFVTGDFSWGVANSWSLYGGSLVAGEYNSMGLGIGRDLY
EEEEECCCHHCCCCCCCCCCCCEEECCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCHH
AFGAISADLTQSIAKLPGLSTKIGQSFRLNYAKQFDEYNSAITFAGYRFSQHNFMTMSQF
HHHCCCHHHHHHHHHCCCCCHHCCCCEEEHHHHHHHHHCCEEEEEEEEECCCCHHHHHHH
LSNKDRLENNNVASSDDYNTWGDKELYTITANKTFWADDAAKALTMYMDYTHRTYWNHDA
HCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCHHHHHEEEEEECCCCCCCCCCC
EDRYGLSINKNVNIGSFKDVSLYLSAYKTKTENYEDDKSVMLTVSMPIGDRKSAGYSVQS
CCCCCEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEC
SNGKVTHLATYQDYSRPDDTYQLGAGVQSNGHAVARGYYNHNSDIGAVSLNAYSVQSEYT
CCCCEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECHHHH
SVGASMRGGLTATEHGAALHQATRRGGTRMMVDTGKVADVSFNNGRAVTNRFGVAVISDM
HHCHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEEECCCEEEEHHCCEEEEHHH
TDYRKSDTRIDVDQLSDDIDAMNAIKQGTLTEGAIGYNAFEIAQGFKLLASVRLPNGSYP
HHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCC
PFGATVVNDAGRVLSVVDEDGLVYLAGVKPDESFELSWGGARQCKIAAPHEVTDLSMKTL
CCCCEEECCCCCEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCEEEEE
TCK
ECC
>Mature Secondary Structure 
SVSTSNSVRTHYLKMAFMLCVPCLLAVADNALAETEFNIDALDLDERTKIDLSQFADEG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEECCCCCCCCCHHHHCCCC
YILPGDYYLEIEVNKNKLPLQKIPFYEVEDGKGKGGVACLPQDLVPRMALTDEAIAKIDS
EECCCCEEEEEEECCCCCCHHHCCEEEECCCCCCCCEEECCHHHCCHHHHCHHHHHHHCC
WHQGQCANLLALDGVIISNDIGNGLLRIAVPQAWLKYSDPNWIPPEQWDVGVTGLMLDYN
CCCCCCCCEEEECCEEEECCCCCCEEEEEECHHHHCCCCCCCCCCCCCCCCEEEEEEEEC
LNAQVNEGRDYSNSNLSSYGTLGANYGPWRLRGDYQASAYWGDDERSSAELNRLYAYRPL
CCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCHHHHHEEEECCH
STMAAKLTVGEQQLNSQLIDGFRYTGVNLANDERMLPPSLQGYAPEVSGIAKTNAKVTIS
HHHHEEEEECHHHHHHHHHCCEEECCCEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEE
QSGRIIYETNVPAGPFRIQGLDSSVRGRLDVRVEEQDGSVSSFQVDTATVPYLTRPGYVR
CCCCEEEECCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEECEECCEEECCCEEE
YNISVGAPSELGDSAHDIHGPGFVTGDFSWGVANSWSLYGGSLVAGEYNSMGLGIGRDLY
EEEEECCCHHCCCCCCCCCCCCEEECCCCCCCCCCCEECCCEEEECCCCCCCCCCCCCHH
AFGAISADLTQSIAKLPGLSTKIGQSFRLNYAKQFDEYNSAITFAGYRFSQHNFMTMSQF
HHHCCCHHHHHHHHHCCCCCHHCCCCEEEHHHHHHHHHCCEEEEEEEEECCCCHHHHHHH
LSNKDRLENNNVASSDDYNTWGDKELYTITANKTFWADDAAKALTMYMDYTHRTYWNHDA
HCCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCHHHHHEEEEEECCCCCCCCCCC
EDRYGLSINKNVNIGSFKDVSLYLSAYKTKTENYEDDKSVMLTVSMPIGDRKSAGYSVQS
CCCCCEEECCCCCCCCCCCCEEEEEEHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEC
SNGKVTHLATYQDYSRPDDTYQLGAGVQSNGHAVARGYYNHNSDIGAVSLNAYSVQSEYT
CCCCEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECHHHH
SVGASMRGGLTATEHGAALHQATRRGGTRMMVDTGKVADVSFNNGRAVTNRFGVAVISDM
HHCHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEEECCCEEEEHHCCEEEEHHH
TDYRKSDTRIDVDQLSDDIDAMNAIKQGTLTEGAIGYNAFEIAQGFKLLASVRLPNGSYP
HHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCC
PFGATVVNDAGRVLSVVDEDGLVYLAGVKPDESFELSWGGARQCKIAAPHEVTDLSMKTL
CCCCEEECCCCCEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCEEEEE
TCK
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7959033 [H]