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The map label for this gene is yigB [H]

Identifier: 145300551

GI number: 145300551

Start: 3969689

End: 3970399

Strand: Direct

Name: yigB [H]

Synonym: ASA_3683

Alternate gene names: 145300551

Gene position: 3969689-3970399 (Clockwise)

Preceding gene: 145300550

Following gene: 145300554

Centisome position: 84.42

GC content: 62.31

Gene sequence:

>711_bases
ATGCATTTTTATCGCCGTTGGCAGCCGGTTGCTGCCATCTCGTTCGACCTCGATGACACCCTCTACGACAATGGCCCGGC
CATTGAACGGGCCGAGCAGTGGATGCTTGAGCATCTGCGCAGCGAATACCTGGCGACCGCCATGCTGGACAAGCCGCGCT
GGCTGGATCTCAAACGCACCATGCTGATCGCCCATCCCGAGCTGCGCCAGGATGTCAGTCTGGCGCGTCAGCGTACCATT
CATGAGGCCATGTTGCAGGGCGGCATGGCGGCAGCCATCGCCAGTCGCGAGGCGGAGCAGGTGTTCGCCGGCTTTCTCGC
CGAACGCTCAAAGATTGAGGTGAGTGACGCGACCCATGACTTGCTGGCACGACTGGCCGAGCGCTATCCGCTGGTGGTGA
TCACCAATGGCAATCTGGACCTGGCCCAGGCTGGGCTGAATGATTACTTCACCCTGGTCTGCAAGGCGGGGGCGGGTGCC
AGGATGAAACCGGCGCCGGACATGTTTGTCCAGGCGCAGGCCGCCCTCAAGCTGGTACCAGATCGGATACTGCACGTGGG
GGATCATCCAGTGACGGACGTGCTGGGAGCACGCCTGCACGGCTTTCGCGCCGCCTGGCTCAATGACTGCCAGCGCTCCT
GGCGGCAGTTGCCATTGTTGCCGGATGTGGAACTGAACGGACTGGGAGAACTGGCAGACCTGCTGCTCTGA

Upstream 100 bases:

>100_bases
GGAGTGTCTGGGGTTATCTGAGCATCCAAACCGCCAGGGTAGCCAGATATGCCGGAAGATGAACAAGGGGGCCTGATTAT
TTCGCCGTGAAGGAGCATGA

Downstream 100 bases:

>100_bases
TCGTTTTCGCCGGCCGCTGTTTGCGGCCCTTATTGACGGCAAATCAGTCCGCGCAGCTGGTCATGGTCGGTCTGGTTGAC
GCGGCAGTAGTTGATGCCCG

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MHFYRRWQPVAAISFDLDDTLYDNGPAIERAEQWMLEHLRSEYLATAMLDKPRWLDLKRTMLIAHPELRQDVSLARQRTI
HEAMLQGGMAAAIASREAEQVFAGFLAERSKIEVSDATHDLLARLAERYPLVVITNGNLDLAQAGLNDYFTLVCKAGAGA
RMKPAPDMFVQAQAALKLVPDRILHVGDHPVTDVLGARLHGFRAAWLNDCQRSWRQLPLLPDVELNGLGELADLLL

Sequences:

>Translated_236_residues
MHFYRRWQPVAAISFDLDDTLYDNGPAIERAEQWMLEHLRSEYLATAMLDKPRWLDLKRTMLIAHPELRQDVSLARQRTI
HEAMLQGGMAAAIASREAEQVFAGFLAERSKIEVSDATHDLLARLAERYPLVVITNGNLDLAQAGLNDYFTLVCKAGAGA
RMKPAPDMFVQAQAALKLVPDRILHVGDHPVTDVLGARLHGFRAAWLNDCQRSWRQLPLLPDVELNGLGELADLLL
>Mature_236_residues
MHFYRRWQPVAAISFDLDDTLYDNGPAIERAEQWMLEHLRSEYLATAMLDKPRWLDLKRTMLIAHPELRQDVSLARQRTI
HEAMLQGGMAAAIASREAEQVFAGFLAERSKIEVSDATHDLLARLAERYPLVVITNGNLDLAQAGLNDYFTLVCKAGAGA
RMKPAPDMFVQAQAALKLVPDRILHVGDHPVTDVLGARLHGFRAAWLNDCQRSWRQLPLLPDVELNGLGELADLLL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=239, Percent_Identity=39.7489539748954, Blast_Score=156, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26500; Mature: 26500

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFYRRWQPVAAISFDLDDTLYDNGPAIERAEQWMLEHLRSEYLATAMLDKPRWLDLKRT
CCCCHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
MLIAHPELRQDVSLARQRTIHEAMLQGGMAAAIASREAEQVFAGFLAERSKIEVSDATHD
HEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHH
LLARLAERYPLVVITNGNLDLAQAGLNDYFTLVCKAGAGARMKPAPDMFVQAQAALKLVP
HHHHHHHHCCEEEEECCCCHHHHHCHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHH
DRILHVGDHPVTDVLGARLHGFRAAWLNDCQRSWRQLPLLPDVELNGLGELADLLL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC
>Mature Secondary Structure
MHFYRRWQPVAAISFDLDDTLYDNGPAIERAEQWMLEHLRSEYLATAMLDKPRWLDLKRT
CCCCHHCCCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
MLIAHPELRQDVSLARQRTIHEAMLQGGMAAAIASREAEQVFAGFLAERSKIEVSDATHD
HEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHH
LLARLAERYPLVVITNGNLDLAQAGLNDYFTLVCKAGAGARMKPAPDMFVQAQAALKLVP
HHHHHHHHCCEEEEECCCCHHHHHCHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHH
DRILHVGDHPVTDVLGARLHGFRAAWLNDCQRSWRQLPLLPDVELNGLGELADLLL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]