Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

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The map label for this gene is 145300527

Identifier: 145300527

GI number: 145300527

Start: 3946717

End: 3947328

Strand: Direct

Name: 145300527

Synonym: ASA_3659

Alternate gene names: NA

Gene position: 3946717-3947328 (Clockwise)

Preceding gene: 145300519

Following gene: 145300545

Centisome position: 83.93

GC content: 56.05

Gene sequence:

>612_bases
ATGAAACACTCGAACCTTGGCTTTACCCTGATTGAACTGGTGCTGGTCATCATAGTGCTGGGGATCCTGGCCGTCACCGC
CCTGCCCCGCTTCATCAATATCAAGGATGATGCGCTCAAGAGCACTGTCTCCACCACCGCAGCCAGCTTTGCCGGTGCGG
TGCAACTGGCCCATGCTGGCTGGGCGGTCAAGACGAGAGGGGAGCCGCTGGCACTCTATAACTTTAGCGGCATGGGTAAG
CAGGATCTCGACATCAACCGGTTTGGCTGGCCGGTGGGCACCAAGGAAGACCAGGGAGGCCAGAGCCCCGATACCATTTT
CCCGGGTGGCGACAGTGATCAGATCTCCGTCAGTAGCCGGGATGATTGCGAGAGTCTGTTCGAAGGCCTGCTCGATACCA
ATCAGACAGCGACCGATGAACTTCATACTGATGCAGAGAGCGATTACATCTCACAACTCATCCCGGCCGATGCCCAGATC
GATGGACCACTACGCCATGACAACTGCCGCTATACTCTGCGTGACTCCATCTCCCGCTTTCCAGCTTACCCGGATGGCTT
GAGTTTTGACTACAACAGCGTTACTGGTGCCGTGACTCGCAATTTTGATTGA

Upstream 100 bases:

>100_bases
CCGGTCGGGATCGAAGACCGGAAAGTCGAGATGGCAATGGGTGTCGATCAGTTGCATGTCACTTTCACCTGTTTGTCGTA
TTTGATGGGTCTACTCAATA

Downstream 100 bases:

>100_bases
GAGACTCTGCATCGCACTCTGGCGCAGCCTTCTTTGTCTCATCGTCATCATAACGAACCGGCATGCAGCAGCGCCGGTTC
TCCGGGGTGAGCCCCCACTC

Product: pilin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAGWAVKTRGEPLALYNFSGMGK
QDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSRDDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQI
DGPLRHDNCRYTLRDSISRFPAYPDGLSFDYNSVTGAVTRNFD

Sequences:

>Translated_203_residues
MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAGWAVKTRGEPLALYNFSGMGK
QDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSRDDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQI
DGPLRHDNCRYTLRDSISRFPAYPDGLSFDYNSVTGAVTRNFD
>Mature_203_residues
MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAGWAVKTRGEPLALYNFSGMGK
QDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSRDDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQI
DGPLRHDNCRYTLRDSISRFPAYPDGLSFDYNSVTGAVTRNFD

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22003; Mature: 22003

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
WAVKTRGEPLALYNFSGMGKQDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSR
EEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
DDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQIDGPLRHDNCRYTLRDSISRF
HHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC
PAYPDGLSFDYNSVTGAVTRNFD
CCCCCCCCCCCCCCCCCEECCCC
>Mature Secondary Structure
MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
WAVKTRGEPLALYNFSGMGKQDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSR
EEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
DDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQIDGPLRHDNCRYTLRDSISRF
HHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC
PAYPDGLSFDYNSVTGAVTRNFD
CCCCCCCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA