| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300527
Identifier: 145300527
GI number: 145300527
Start: 3946717
End: 3947328
Strand: Direct
Name: 145300527
Synonym: ASA_3659
Alternate gene names: NA
Gene position: 3946717-3947328 (Clockwise)
Preceding gene: 145300519
Following gene: 145300545
Centisome position: 83.93
GC content: 56.05
Gene sequence:
>612_bases ATGAAACACTCGAACCTTGGCTTTACCCTGATTGAACTGGTGCTGGTCATCATAGTGCTGGGGATCCTGGCCGTCACCGC CCTGCCCCGCTTCATCAATATCAAGGATGATGCGCTCAAGAGCACTGTCTCCACCACCGCAGCCAGCTTTGCCGGTGCGG TGCAACTGGCCCATGCTGGCTGGGCGGTCAAGACGAGAGGGGAGCCGCTGGCACTCTATAACTTTAGCGGCATGGGTAAG CAGGATCTCGACATCAACCGGTTTGGCTGGCCGGTGGGCACCAAGGAAGACCAGGGAGGCCAGAGCCCCGATACCATTTT CCCGGGTGGCGACAGTGATCAGATCTCCGTCAGTAGCCGGGATGATTGCGAGAGTCTGTTCGAAGGCCTGCTCGATACCA ATCAGACAGCGACCGATGAACTTCATACTGATGCAGAGAGCGATTACATCTCACAACTCATCCCGGCCGATGCCCAGATC GATGGACCACTACGCCATGACAACTGCCGCTATACTCTGCGTGACTCCATCTCCCGCTTTCCAGCTTACCCGGATGGCTT GAGTTTTGACTACAACAGCGTTACTGGTGCCGTGACTCGCAATTTTGATTGA
Upstream 100 bases:
>100_bases CCGGTCGGGATCGAAGACCGGAAAGTCGAGATGGCAATGGGTGTCGATCAGTTGCATGTCACTTTCACCTGTTTGTCGTA TTTGATGGGTCTACTCAATA
Downstream 100 bases:
>100_bases GAGACTCTGCATCGCACTCTGGCGCAGCCTTCTTTGTCTCATCGTCATCATAACGAACCGGCATGCAGCAGCGCCGGTTC TCCGGGGTGAGCCCCCACTC
Product: pilin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAGWAVKTRGEPLALYNFSGMGK QDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSRDDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQI DGPLRHDNCRYTLRDSISRFPAYPDGLSFDYNSVTGAVTRNFD
Sequences:
>Translated_203_residues MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAGWAVKTRGEPLALYNFSGMGK QDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSRDDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQI DGPLRHDNCRYTLRDSISRFPAYPDGLSFDYNSVTGAVTRNFD >Mature_203_residues MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAGWAVKTRGEPLALYNFSGMGK QDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSRDDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQI DGPLRHDNCRYTLRDSISRFPAYPDGLSFDYNSVTGAVTRNFD
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22003; Mature: 22003
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC WAVKTRGEPLALYNFSGMGKQDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSR EEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC DDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQIDGPLRHDNCRYTLRDSISRF HHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC PAYPDGLSFDYNSVTGAVTRNFD CCCCCCCCCCCCCCCCCEECCCC >Mature Secondary Structure MKHSNLGFTLIELVLVIIVLGILAVTALPRFINIKDDALKSTVSTTAASFAGAVQLAHAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC WAVKTRGEPLALYNFSGMGKQDLDINRFGWPVGTKEDQGGQSPDTIFPGGDSDQISVSSR EEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC DDCESLFEGLLDTNQTATDELHTDAESDYISQLIPADAQIDGPLRHDNCRYTLRDSISRF HHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHC PAYPDGLSFDYNSVTGAVTRNFD CCCCCCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA