| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300459
Identifier: 145300459
GI number: 145300459
Start: 3874678
End: 3875769
Strand: Direct
Name: 145300459
Synonym: ASA_3585
Alternate gene names: NA
Gene position: 3874678-3875769 (Clockwise)
Preceding gene: 145300451
Following gene: 145300465
Centisome position: 82.4
GC content: 43.68
Gene sequence:
>1092_bases ATGGATTTTTCAGAACAGTTACAGAGCCTAGCCAAAAAGATTGCTCAACAGTCGTCGATGATCACGACCGAAGAGGCAAC CAAGAATGCGTTTGTAATGCCATTTCTCAACCGCGTACTGGGGTATGATGTATTCGACCCCACCGAAGTAATTCCAGAAT TCACCGCAGATACTGGTATCAAAAAGGGGGAAAAAGTTGACTATGCCATTCTTAAGGATGGACAGATTCAGATTCTGGTT GAGTGCAAAAAGTACAGTGAGAAACTGTCAACCAAGCACTCGGGGCAACTCTTTCGTTATTTTTCTGTCACTAATGCCCG CATCGGCATCCTGACCAATGGTGCTCAATATGAGTTTTATACCGACCTTGATGCACCAAACAAGATGGACGAGAAACCAT TTCTAACGCTCGATTTAGAAGACATTGATGAACACATAGTGCCTGAGGTATTGAAGCTGACCAAGACCTCCTTTGATGTA GAGTCGGTTGTCGATGCAGCAGGAGAGCTAAAATATCTCAGTCAAATCAAGAGACTACTGGCTGAGCAGTTTGGTTCGCC AGAAGAGGACTTTGTTAAGTTCTTTGCATCCAGGATCTATGATGGTGTGCTTACCGCAAGGGTCAAGCAGTCCTTTACCG ATATAACCAAGAAAGCCCTCAGTCAGTTTCTCAATGACAGCATCAATGCACGGTTAAAATCAGCAATTGGTAGCACAGTT AGCTCCTCGGCTATCCAGCCTGCATTTGATAGTGGCCTATCAAGTGATAACAATGAAGTCGATAATAGTGAGGAAAAATC AAAGGTAGATACCACAATTGAAGAGATGGAAGGTTTCAATGTCGTCAAGGCCATCTTGAGACAACAGTTTGATGTAACCA GGATCGCAGCCAGAGATACTCAAAGCTACTTTGGCATACTGCTCGATGACAATAACCGCAAGCCACTATGCCGGTTACAT TTCAATGCAAAGCAAAAATATATTGGTTTGTTTGACGCTGACAAAAAAGAAACCAGGCATCCCATTAGCTCTATCGATGA AATATTTACCTTTGCCGACCAGCTACTGACGGCCACTGCCGTCTACGAATAA
Upstream 100 bases:
>100_bases TCAACTATGTCTACGTTATCACCCGATTTCTAGCCCGAAATGGTGAAAGGGGAATGTCAATTCAGCCATGCCAACACCCA GTGTCCATGTGGAGATAAAA
Downstream 100 bases:
>100_bases TCTGATTGGGGGCGGATTAATTCCGTCCCCCCTCCTTCAACCAAGTCTGCGCAAAATGCCTATCGCCCCCCGGCAAGATC GATAAAGGTGCCGGTGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MDFSEQLQSLAKKIAQQSSMITTEEATKNAFVMPFLNRVLGYDVFDPTEVIPEFTADTGIKKGEKVDYAILKDGQIQILV ECKKYSEKLSTKHSGQLFRYFSVTNARIGILTNGAQYEFYTDLDAPNKMDEKPFLTLDLEDIDEHIVPEVLKLTKTSFDV ESVVDAAGELKYLSQIKRLLAEQFGSPEEDFVKFFASRIYDGVLTARVKQSFTDITKKALSQFLNDSINARLKSAIGSTV SSSAIQPAFDSGLSSDNNEVDNSEEKSKVDTTIEEMEGFNVVKAILRQQFDVTRIAARDTQSYFGILLDDNNRKPLCRLH FNAKQKYIGLFDADKKETRHPISSIDEIFTFADQLLTATAVYE
Sequences:
>Translated_363_residues MDFSEQLQSLAKKIAQQSSMITTEEATKNAFVMPFLNRVLGYDVFDPTEVIPEFTADTGIKKGEKVDYAILKDGQIQILV ECKKYSEKLSTKHSGQLFRYFSVTNARIGILTNGAQYEFYTDLDAPNKMDEKPFLTLDLEDIDEHIVPEVLKLTKTSFDV ESVVDAAGELKYLSQIKRLLAEQFGSPEEDFVKFFASRIYDGVLTARVKQSFTDITKKALSQFLNDSINARLKSAIGSTV SSSAIQPAFDSGLSSDNNEVDNSEEKSKVDTTIEEMEGFNVVKAILRQQFDVTRIAARDTQSYFGILLDDNNRKPLCRLH FNAKQKYIGLFDADKKETRHPISSIDEIFTFADQLLTATAVYE >Mature_363_residues MDFSEQLQSLAKKIAQQSSMITTEEATKNAFVMPFLNRVLGYDVFDPTEVIPEFTADTGIKKGEKVDYAILKDGQIQILV ECKKYSEKLSTKHSGQLFRYFSVTNARIGILTNGAQYEFYTDLDAPNKMDEKPFLTLDLEDIDEHIVPEVLKLTKTSFDV ESVVDAAGELKYLSQIKRLLAEQFGSPEEDFVKFFASRIYDGVLTARVKQSFTDITKKALSQFLNDSINARLKSAIGSTV SSSAIQPAFDSGLSSDNNEVDNSEEKSKVDTTIEEMEGFNVVKAILRQQFDVTRIAARDTQSYFGILLDDNNRKPLCRLH FNAKQKYIGLFDADKKETRHPISSIDEIFTFADQLLTATAVYE
Specific function: Unknown
COG id: COG4748
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40905; Mature: 40905
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSEQLQSLAKKIAQQSSMITTEEATKNAFVMPFLNRVLGYDVFDPTEVIPEFTADTGI CCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCC KKGEKVDYAILKDGQIQILVECKKYSEKLSTKHSGQLFRYFSVTNARIGILTNGAQYEFY CCCCCCCEEEECCCCEEEEEEHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCEEEE TDLDAPNKMDEKPFLTLDLEDIDEHIVPEVLKLTKTSFDVESVVDAAGELKYLSQIKRLL ECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AEQFGSPEEDFVKFFASRIYDGVLTARVKQSFTDITKKALSQFLNDSINARLKSAIGSTV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SSSAIQPAFDSGLSSDNNEVDNSEEKSKVDTTIEEMEGFNVVKAILRQQFDVTRIAARDT HHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCC QSYFGILLDDNNRKPLCRLHFNAKQKYIGLFDADKKETRHPISSIDEIFTFADQLLTATA CCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHH VYE CCC >Mature Secondary Structure MDFSEQLQSLAKKIAQQSSMITTEEATKNAFVMPFLNRVLGYDVFDPTEVIPEFTADTGI CCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCC KKGEKVDYAILKDGQIQILVECKKYSEKLSTKHSGQLFRYFSVTNARIGILTNGAQYEFY CCCCCCCEEEECCCCEEEEEEHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCEEEE TDLDAPNKMDEKPFLTLDLEDIDEHIVPEVLKLTKTSFDVESVVDAAGELKYLSQIKRLL ECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AEQFGSPEEDFVKFFASRIYDGVLTARVKQSFTDITKKALSQFLNDSINARLKSAIGSTV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SSSAIQPAFDSGLSSDNNEVDNSEEKSKVDTTIEEMEGFNVVKAILRQQFDVTRIAARDT HHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCC QSYFGILLDDNNRKPLCRLHFNAKQKYIGLFDADKKETRHPISSIDEIFTFADQLLTATA CCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHH VYE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA