| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300431
Identifier: 145300431
GI number: 145300431
Start: 3846801
End: 3848861
Strand: Direct
Name: 145300431
Synonym: ASA_3557
Alternate gene names: NA
Gene position: 3846801-3848861 (Clockwise)
Preceding gene: 145300430
Following gene: 145300432
Centisome position: 81.81
GC content: 63.95
Gene sequence:
>2061_bases ATGAAACTGACTCCCCTGTGGCTGGCGCTGTGCAGCCTGCCTGTGCTGGCCTGTGGCCCGGATGGCTGCGAAACGCCGCT CACCCTGCAACTGACTGCAGCCCAGTGCCATCTGAACGGACTGCCATTTCTCTCCCCCGATAACGACACCCGTACCAATC TGGCCTTGCTGCTGGCCGATGAGCAGGCTTTCTCCCTGCCCGGTGGGGCTCTGCCTTTGCCATTTCGGGTCGATGAGCTG ATAAGCCCGGCCGCTGGCGATACCGCACCTGCCGGACCGGATCCCCTGCTGGCGCTAGCCGCGTCGCTCGGCATAGAGGC CGCCACCACTGAAACGGCCATCACCCGGGCCGGCAGCTGGAGCGAGGGGCGCTGTATCAGCAACAATCCAGTCTCTGCCG AGGCCTTCTTGCAGGCACTGGTGCAAACGCCCGCCCTTACCGCCAGTGATCGCAGCCAGCTGGCAAGCCAGCGGCTCGCC ATGCTGGGTCAGTGCGGCCAAGCGCAGGACGCGGCAGAAAGCATGCCCCTGGGCGAAAGCAAGACGGCGCCGCTGTCCGC CGCCGCCAAGGGGTTTGCCGACTACCTGACCGCCAGCCAGCACTTCTATCAGGGGGAATTTGCACAGGCGGATGCGCTGT TTGGCATCCTCGCCGAACAGGACCAGCCCTGGCTCAAGGAGACGGCCGACTACATGAAGATCCGGGTCGCCCTCAACCAG TCACAGCAAAGCGCCTTCGACGATTGGGGCAGCCTGGACCGCAGCCAGATCGATCAGGCTCAGCTACAGCGCTGCGAGCA GCTCATCACCGACTACCGCACCCGCTATCCACAGGGGCGCTATCTGGATTCCGCCACCGGCTTGTTGCGTCGACTTGCCT GGTTCAAGGGGGATAACGAGCTGCTGGCCAATCACTATCTGCAGGCGAGCCAACAGCAGAGCCCACCGGATCTGGTCAAC GAGATCGATCTCAAATTGCTGATGCAACCCGGCTTCACCGGCTCGGCAACCATGCCCATGCTGATCCTGGTGCAGGATCT GCGCCGGCTGCGGATCCATGACAGCTGGGATGAGTGGCAGCCGCTGCTCGCCGCCGAGATCGGCAAGCAAGCCCCCCAGT TTGCCCGGCACGCCCCCTGGCTGGCCTATCTGGAGCAGTCCAGCCGCTACTATCTCGCCAAGGATTATGCCGCCGTGGTC GCTGCCACCCCTGCGCTGGCCAACGGCACCCTGAATAATCTGGCCTTCAGCCAGCAGGTATTGAAAGGGATGGCACTGGC TGCACAGCAGCAGTGGACCAAAGCCGAACAGCAGTGGCGCGCCCTGCTCGCCAACCAGCCAACCCCCTTGCAGGATCAGC TGTTGCAGCTTGCCCTGGCCATGACCCTGGAACGGGCAGGCCAGCTGGAGCAGGTGTTTGCCAAGGAAAGCCCCATCAAG AGCGATCACTACCGGATCCCGCTGCTGGAGTATGTGGCACCGGCGCCCCTGCTGCGCCGCATGGCCCGGGATGAAACCGC CTCCGAGCCCCTGCGTCAGCGTGCCAGTTACACCCTGAGTTACAAGCAGCTGACCCATGGCGACTACCAGGGCTTCCTGC AAGATATGGCGGGCGCTCCCCCTGCGGCACCGTTCAACTGGCAAGGCAGCCAGGGTTATCAGTGCCCGGCCCTGACCGAG GTGGTCGCCACCCTCGCCAAGGCGCCTGGTACGCCCAAAGCCCTCAACTGCCTGGGCGAGTTTTTCCTGGCACAAGGGCT GGATTGGGATCCCCTGCTCCATCGCCCGGGAGCCGATACCCTGGCGGGGAGCCAGGACCTGTTTGCCGGCAAGCAGCGCA GCCGCCTCGACTGGTATCAGCAGGTCATCGCCAATCCCAAAGCCGGCAAGGACGACAAGGCCTACGCCCTCTATCGCGCC ATCAACTGCTACGCCCCGAGCGGCAGCAACGGTTGCGGCAGTCAGGATCTGCCCGTCAGCCAGCGCAAGGCCTGGTTCAA CACCCTCAAGCAGCAACACGGGGCAAGCCAGTGGGCAAAACAGCTCAAATATTACTGGTGA
Upstream 100 bases:
>100_bases TTAATCCAGGCGCCCCCTATGGTCAGTTGAAAGGCGCCCCCACATCTTGTAGCTTGCCTCCATCCCCTTCTCTTGACTCC CTTGGCCGGAAACCGCCCTC
Downstream 100 bases:
>100_bases TGCTGACGCTGCTAGGCACCGAGGCCAGGGCAACCGTCGAGGCGAGCCAGTACCGCCAGTTCTGGCTGTGGGCCGGGGTC AAACCCCAACCCGTGTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 686; Mature: 686
Protein sequence:
>686_residues MKLTPLWLALCSLPVLACGPDGCETPLTLQLTAAQCHLNGLPFLSPDNDTRTNLALLLADEQAFSLPGGALPLPFRVDEL ISPAAGDTAPAGPDPLLALAASLGIEAATTETAITRAGSWSEGRCISNNPVSAEAFLQALVQTPALTASDRSQLASQRLA MLGQCGQAQDAAESMPLGESKTAPLSAAAKGFADYLTASQHFYQGEFAQADALFGILAEQDQPWLKETADYMKIRVALNQ SQQSAFDDWGSLDRSQIDQAQLQRCEQLITDYRTRYPQGRYLDSATGLLRRLAWFKGDNELLANHYLQASQQQSPPDLVN EIDLKLLMQPGFTGSATMPMLILVQDLRRLRIHDSWDEWQPLLAAEIGKQAPQFARHAPWLAYLEQSSRYYLAKDYAAVV AATPALANGTLNNLAFSQQVLKGMALAAQQQWTKAEQQWRALLANQPTPLQDQLLQLALAMTLERAGQLEQVFAKESPIK SDHYRIPLLEYVAPAPLLRRMARDETASEPLRQRASYTLSYKQLTHGDYQGFLQDMAGAPPAAPFNWQGSQGYQCPALTE VVATLAKAPGTPKALNCLGEFFLAQGLDWDPLLHRPGADTLAGSQDLFAGKQRSRLDWYQQVIANPKAGKDDKAYALYRA INCYAPSGSNGCGSQDLPVSQRKAWFNTLKQQHGASQWAKQLKYYW
Sequences:
>Translated_686_residues MKLTPLWLALCSLPVLACGPDGCETPLTLQLTAAQCHLNGLPFLSPDNDTRTNLALLLADEQAFSLPGGALPLPFRVDEL ISPAAGDTAPAGPDPLLALAASLGIEAATTETAITRAGSWSEGRCISNNPVSAEAFLQALVQTPALTASDRSQLASQRLA MLGQCGQAQDAAESMPLGESKTAPLSAAAKGFADYLTASQHFYQGEFAQADALFGILAEQDQPWLKETADYMKIRVALNQ SQQSAFDDWGSLDRSQIDQAQLQRCEQLITDYRTRYPQGRYLDSATGLLRRLAWFKGDNELLANHYLQASQQQSPPDLVN EIDLKLLMQPGFTGSATMPMLILVQDLRRLRIHDSWDEWQPLLAAEIGKQAPQFARHAPWLAYLEQSSRYYLAKDYAAVV AATPALANGTLNNLAFSQQVLKGMALAAQQQWTKAEQQWRALLANQPTPLQDQLLQLALAMTLERAGQLEQVFAKESPIK SDHYRIPLLEYVAPAPLLRRMARDETASEPLRQRASYTLSYKQLTHGDYQGFLQDMAGAPPAAPFNWQGSQGYQCPALTE VVATLAKAPGTPKALNCLGEFFLAQGLDWDPLLHRPGADTLAGSQDLFAGKQRSRLDWYQQVIANPKAGKDDKAYALYRA INCYAPSGSNGCGSQDLPVSQRKAWFNTLKQQHGASQWAKQLKYYW >Mature_686_residues MKLTPLWLALCSLPVLACGPDGCETPLTLQLTAAQCHLNGLPFLSPDNDTRTNLALLLADEQAFSLPGGALPLPFRVDEL ISPAAGDTAPAGPDPLLALAASLGIEAATTETAITRAGSWSEGRCISNNPVSAEAFLQALVQTPALTASDRSQLASQRLA MLGQCGQAQDAAESMPLGESKTAPLSAAAKGFADYLTASQHFYQGEFAQADALFGILAEQDQPWLKETADYMKIRVALNQ SQQSAFDDWGSLDRSQIDQAQLQRCEQLITDYRTRYPQGRYLDSATGLLRRLAWFKGDNELLANHYLQASQQQSPPDLVN EIDLKLLMQPGFTGSATMPMLILVQDLRRLRIHDSWDEWQPLLAAEIGKQAPQFARHAPWLAYLEQSSRYYLAKDYAAVV AATPALANGTLNNLAFSQQVLKGMALAAQQQWTKAEQQWRALLANQPTPLQDQLLQLALAMTLERAGQLEQVFAKESPIK SDHYRIPLLEYVAPAPLLRRMARDETASEPLRQRASYTLSYKQLTHGDYQGFLQDMAGAPPAAPFNWQGSQGYQCPALTE VVATLAKAPGTPKALNCLGEFFLAQGLDWDPLLHRPGADTLAGSQDLFAGKQRSRLDWYQQVIANPKAGKDDKAYALYRA INCYAPSGSNGCGSQDLPVSQRKAWFNTLKQQHGASQWAKQLKYYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75236; Mature: 75236
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTPLWLALCSLPVLACGPDGCETPLTLQLTAAQCHLNGLPFLSPDNDTRTNLALLLAD CCCCHHHHHHHHCCEEEECCCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEEC EQAFSLPGGALPLPFRVDELISPAAGDTAPAGPDPLLALAASLGIEAATTETAITRAGSW CHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC SEGRCISNNPVSAEAFLQALVQTPALTASDRSQLASQRLAMLGQCGQAQDAAESMPLGES CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC KTAPLSAAAKGFADYLTASQHFYQGEFAQADALFGILAEQDQPWLKETADYMKIRVALNQ CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC SQQSAFDDWGSLDRSQIDQAQLQRCEQLITDYRTRYPQGRYLDSATGLLRRLAWFKGDNE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHH LLANHYLQASQQQSPPDLVNEIDLKLLMQPGFTGSATMPMLILVQDLRRLRIHDSWDEWQ HHHHHHHHHHCCCCCHHHHHHHCHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH PLLAAEIGKQAPQFARHAPWLAYLEQSSRYYLAKDYAAVVAATPALANGTLNNLAFSQQV HHHHHHHHHHCHHHHHHCCHHHHHHHCCCEEEHHHHHHHHHHCCHHHCCCHHHHHHHHHH LKGMALAAQQQWTKAEQQWRALLANQPTPLQDQLLQLALAMTLERAGQLEQVFAKESPIK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDHYRIPLLEYVAPAPLLRRMARDETASEPLRQRASYTLSYKQLTHGDYQGFLQDMAGAP CCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHEEHHHHHHCCHHHHHHHHHCCCC PAAPFNWQGSQGYQCPALTEVVATLAKAPGTPKALNCLGEFFLAQGLDWDPLLHRPGADT CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCC LAGSQDLFAGKQRSRLDWYQQVIANPKAGKDDKAYALYRAINCYAPSGSNGCGSQDLPVS CCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCHH QRKAWFNTLKQQHGASQWAKQLKYYW HHHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure MKLTPLWLALCSLPVLACGPDGCETPLTLQLTAAQCHLNGLPFLSPDNDTRTNLALLLAD CCCCHHHHHHHHCCEEEECCCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEEC EQAFSLPGGALPLPFRVDELISPAAGDTAPAGPDPLLALAASLGIEAATTETAITRAGSW CHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC SEGRCISNNPVSAEAFLQALVQTPALTASDRSQLASQRLAMLGQCGQAQDAAESMPLGES CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC KTAPLSAAAKGFADYLTASQHFYQGEFAQADALFGILAEQDQPWLKETADYMKIRVALNQ CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC SQQSAFDDWGSLDRSQIDQAQLQRCEQLITDYRTRYPQGRYLDSATGLLRRLAWFKGDNE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHH LLANHYLQASQQQSPPDLVNEIDLKLLMQPGFTGSATMPMLILVQDLRRLRIHDSWDEWQ HHHHHHHHHHCCCCCHHHHHHHCHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH PLLAAEIGKQAPQFARHAPWLAYLEQSSRYYLAKDYAAVVAATPALANGTLNNLAFSQQV HHHHHHHHHHCHHHHHHCCHHHHHHHCCCEEEHHHHHHHHHHCCHHHCCCHHHHHHHHHH LKGMALAAQQQWTKAEQQWRALLANQPTPLQDQLLQLALAMTLERAGQLEQVFAKESPIK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDHYRIPLLEYVAPAPLLRRMARDETASEPLRQRASYTLSYKQLTHGDYQGFLQDMAGAP CCCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHEEHHHHHHCCHHHHHHHHHCCCC PAAPFNWQGSQGYQCPALTEVVATLAKAPGTPKALNCLGEFFLAQGLDWDPLLHRPGADT CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCC LAGSQDLFAGKQRSRLDWYQQVIANPKAGKDDKAYALYRAINCYAPSGSNGCGSQDLPVS CCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCHH QRKAWFNTLKQQHGASQWAKQLKYYW HHHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA