| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300415
Identifier: 145300415
GI number: 145300415
Start: 3829505
End: 3830428
Strand: Direct
Name: 145300415
Synonym: ASA_3540
Alternate gene names: NA
Gene position: 3829505-3830428 (Clockwise)
Preceding gene: 145300414
Following gene: 145300416
Centisome position: 81.44
GC content: 37.34
Gene sequence:
>924_bases ATGGGTGCAGATGAATCAAGCAGACGAATAAAATTTGCCTATCAAATGGAACATTGGAGCTATGAGGGGGGTAACCCAAA TTTACTCAAAGCTAATGCAAAGAAAATCATCCCGTCTGAATATAAATCCGACATGGATGGAAACATATTCTGTCCAGGTT GTTTTACTAATCTTAATCGTGTCCCAAAAGAAAAAGAGCATTTTACCAATGGGCGAGAAGCATTCTTTTCCCACATTAGA ACTTACAAAGACGTAAAATGTGATTTAAAGTCAATTAAACCAGAAGGTAAAAGGTACGCAAACTGGGAAGAAGCCAAGAA AGCAATTGACGATGAAAATTTAGTCATTATAAGTAGTTTTTTAAAAAATAAACCAGAACCCAAAGATGACCAACCTGCAA TTTATGATGAAACACCTGTAGAGGATGATGCAGGACCTACTACAGAGGTTGCGATTGGACGCCATAACGGCGAAACATTT GCTTTGCCTAGTCGGATCAAAACGGTGGCTGGTCTCTGCCGAAATTTCGACGAAAATTTATATAAATACTTCCACTTACC TGATAAAAAATATGCAGTTCGACTTATAGACCTTTTAAAGAGTGCTAGAGAAATTTCAGAAGAAACTGATGTCCCGGGGT TTTATTATGGGAGAATTGCAAGCACAGTTCATCTAGGTGAATATAAAAGACCAACTAATATTAGAATGACTTACCTTGAA AATGATGCAAAAGGAGTTTGGGACTTTTGCTTAAAATCTCAAGATAAAGATCAAAAAGCACACGGTATTGATGACAACTC TGTTGGTCGTATATTGATTGCCTATGGTTCTGTAAAACAAAATGGGACAGGTTTGTGCTTTCAAGGTTTAGGTTGGGGGG AGTTTAGCTTACTGCCTGAAAAATATAACCATTTGCTGGACTAA
Upstream 100 bases:
>100_bases GTAATTCGGAAGGCTCGATTATCGGATGAGTACCGCCTTCAATCTAATCATCGTTATGTGCTTTTCCGCAATCGAGTTCA ATCTTAAGTAAGGAGGCTAT
Downstream 100 bases:
>100_bases GCACATGACAAACGCCTCAAGAGGAACTTTCAACGCGTGGCGTTTACAGTCCTAATGGGCCGAGTTGGTTACGGTTGTTG TGATTGAGTTGTTTGTAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MGADESSRRIKFAYQMEHWSYEGGNPNLLKANAKKIIPSEYKSDMDGNIFCPGCFTNLNRVPKEKEHFTNGREAFFSHIR TYKDVKCDLKSIKPEGKRYANWEEAKKAIDDENLVIISSFLKNKPEPKDDQPAIYDETPVEDDAGPTTEVAIGRHNGETF ALPSRIKTVAGLCRNFDENLYKYFHLPDKKYAVRLIDLLKSAREISEETDVPGFYYGRIASTVHLGEYKRPTNIRMTYLE NDAKGVWDFCLKSQDKDQKAHGIDDNSVGRILIAYGSVKQNGTGLCFQGLGWGEFSLLPEKYNHLLD
Sequences:
>Translated_307_residues MGADESSRRIKFAYQMEHWSYEGGNPNLLKANAKKIIPSEYKSDMDGNIFCPGCFTNLNRVPKEKEHFTNGREAFFSHIR TYKDVKCDLKSIKPEGKRYANWEEAKKAIDDENLVIISSFLKNKPEPKDDQPAIYDETPVEDDAGPTTEVAIGRHNGETF ALPSRIKTVAGLCRNFDENLYKYFHLPDKKYAVRLIDLLKSAREISEETDVPGFYYGRIASTVHLGEYKRPTNIRMTYLE NDAKGVWDFCLKSQDKDQKAHGIDDNSVGRILIAYGSVKQNGTGLCFQGLGWGEFSLLPEKYNHLLD >Mature_306_residues GADESSRRIKFAYQMEHWSYEGGNPNLLKANAKKIIPSEYKSDMDGNIFCPGCFTNLNRVPKEKEHFTNGREAFFSHIRT YKDVKCDLKSIKPEGKRYANWEEAKKAIDDENLVIISSFLKNKPEPKDDQPAIYDETPVEDDAGPTTEVAIGRHNGETFA LPSRIKTVAGLCRNFDENLYKYFHLPDKKYAVRLIDLLKSAREISEETDVPGFYYGRIASTVHLGEYKRPTNIRMTYLEN DAKGVWDFCLKSQDKDQKAHGIDDNSVGRILIAYGSVKQNGTGLCFQGLGWGEFSLLPEKYNHLLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34997; Mature: 34866
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADESSRRIKFAYQMEHWSYEGGNPNLLKANAKKIIPSEYKSDMDGNIFCPGCFTNLNR CCCCCCCCEEEEEEEEECEECCCCCCCEEECCCHHCCCHHHCCCCCCCEECCHHHHHHHC VPKEKEHFTNGREAFFSHIRTYKDVKCDLKSIKPEGKRYANWEEAKKAIDDENLVIISSF CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEHH LKNKPEPKDDQPAIYDETPVEDDAGPTTEVAIGRHNGETFALPSRIKTVAGLCRNFDENL HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHH YKYFHLPDKKYAVRLIDLLKSAREISEETDVPGFYYGRIASTVHLGEYKRPTNIRMTYLE HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHEEECCCCCCCCCEEEEEEE NDAKGVWDFCLKSQDKDQKAHGIDDNSVGRILIAYGSVKQNGTGLCFQGLGWGEFSLLPE CCCCHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHEECHH KYNHLLD HHHHHCC >Mature Secondary Structure GADESSRRIKFAYQMEHWSYEGGNPNLLKANAKKIIPSEYKSDMDGNIFCPGCFTNLNR CCCCCCCEEEEEEEEECEECCCCCCCEEECCCHHCCCHHHCCCCCCCEECCHHHHHHHC VPKEKEHFTNGREAFFSHIRTYKDVKCDLKSIKPEGKRYANWEEAKKAIDDENLVIISSF CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEEHH LKNKPEPKDDQPAIYDETPVEDDAGPTTEVAIGRHNGETFALPSRIKTVAGLCRNFDENL HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHH YKYFHLPDKKYAVRLIDLLKSAREISEETDVPGFYYGRIASTVHLGEYKRPTNIRMTYLE HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHEEECCCCCCCCCEEEEEEE NDAKGVWDFCLKSQDKDQKAHGIDDNSVGRILIAYGSVKQNGTGLCFQGLGWGEFSLLPE CCCCHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHEECHH KYNHLLD HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA