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The map label for this gene is ytfJ [H]

Identifier: 145300385

GI number: 145300385

Start: 3800892

End: 3801434

Strand: Direct

Name: ytfJ [H]

Synonym: ASA_3510

Alternate gene names: 145300385

Gene position: 3800892-3801434 (Clockwise)

Preceding gene: 145300384

Following gene: 145300386

Centisome position: 80.83

GC content: 54.88

Gene sequence:

>543_bases
ATGAAACATCTCGTACTTACTCTGGCGCTGCTGCCGACCCTAGCCATGGCTCACAACATCAAGGAGTCTGCCCAGGTGCC
GCTGGTCAATATCAGCGACAAGGGTGAACTGGTGCTGAAAGAGAAAGAGGTCAGCTACCAACCCTGGCAAAGCAAGGTAC
TGACTGGCAAAGTTTTTCTGATCCAGCACATAGCGGGTCGATCCAGTGCCAAGGAACTAAACGCCCCCATGATCGAGGCG
ATCAAAGCGGCCAAGCTACCTCACGACAAGTACCAGACCGTCACCATCATCAACAGCAATGACGCCATCTGGGGTACTTC
CGGCTTTGTGAAGAGCAGTGCCGAAGACAGCAAGAAAGAGTTCCCCTGGTCCGCCATGGTACTGGATGCCAAAGGCATGG
CTCGCAACGCCTGGGATCTCGCGCCGGAAAGTTCGGCCATCATACTGCTGGATAAAGAGGGCAAGGTGCTGTTCGCCAAA
GACGGCCAGCTCGATGCCACCAATATTGCTACCGTGATGGGGCTCATCCAGTCCCATCTCTGA

Upstream 100 bases:

>100_bases
TTTAACACTTTTTAAACAGATCCGATCAGTTTAGGATGAGTTCTGCCCCATTCCCTCAAGTGAAAAATCGTTATAACATA
ACAAAAGGAGTGTCATCAGG

Downstream 100 bases:

>100_bases
ATCAGAGAGAAGGGGCGCTGACGGCGCCCTTTCATAAGGGTCTATGGGTCGTTCCAAGCTGAAAATCGGGTTGTTGCTGC
TGGGCTGGTTGTGGATACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKHLVLTLALLPTLAMAHNIKESAQVPLVNISDKGELVLKEKEVSYQPWQSKVLTGKVFLIQHIAGRSSAKELNAPMIEA
IKAAKLPHDKYQTVTIINSNDAIWGTSGFVKSSAEDSKKEFPWSAMVLDAKGMARNAWDLAPESSAIILLDKEGKVLFAK
DGQLDATNIATVMGLIQSHL

Sequences:

>Translated_180_residues
MKHLVLTLALLPTLAMAHNIKESAQVPLVNISDKGELVLKEKEVSYQPWQSKVLTGKVFLIQHIAGRSSAKELNAPMIEA
IKAAKLPHDKYQTVTIINSNDAIWGTSGFVKSSAEDSKKEFPWSAMVLDAKGMARNAWDLAPESSAIILLDKEGKVLFAK
DGQLDATNIATVMGLIQSHL
>Mature_180_residues
MKHLVLTLALLPTLAMAHNIKESAQVPLVNISDKGELVLKEKEVSYQPWQSKVLTGKVFLIQHIAGRSSAKELNAPMIEA
IKAAKLPHDKYQTVTIINSNDAIWGTSGFVKSSAEDSKKEFPWSAMVLDAKGMARNAWDLAPESSAIILLDKEGKVLFAK
DGQLDATNIATVMGLIQSHL

Specific function: Unknown

COG id: COG3054

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0045 [H]

Homologues:

Organism=Escherichia coli, GI1790662, Length=179, Percent_Identity=53.072625698324, Blast_Score=196, Evalue=7e-52,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006513 [H]

Pfam domain/function: PF09695 YtfJ_HI0045 [H]

EC number: NA

Molecular weight: Translated: 19631; Mature: 19631

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLVLTLALLPTLAMAHNIKESAQVPLVNISDKGELVLKEKEVSYQPWQSKVLTGKVFL
CCHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCEEECHHEE
IQHIAGRSSAKELNAPMIEAIKAAKLPHDKYQTVTIINSNDAIWGTSGFVKSSAEDSKKE
EHHHHCCCCHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCHHHH
FPWSAMVLDAKGMARNAWDLAPESSAIILLDKEGKVLFAKDGQLDATNIATVMGLIQSHL
CCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHLVLTLALLPTLAMAHNIKESAQVPLVNISDKGELVLKEKEVSYQPWQSKVLTGKVFL
CCHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCEEECHHEE
IQHIAGRSSAKELNAPMIEAIKAAKLPHDKYQTVTIINSNDAIWGTSGFVKSSAEDSKKE
EHHHHCCCCHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCHHHH
FPWSAMVLDAKGMARNAWDLAPESSAIILLDKEGKVLFAKDGQLDATNIATVMGLIQSHL
CCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7764507; 9298646; 10493123 [H]