| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300384
Identifier: 145300384
GI number: 145300384
Start: 3799790
End: 3800668
Strand: Direct
Name: 145300384
Synonym: ASA_3509
Alternate gene names: NA
Gene position: 3799790-3800668 (Clockwise)
Preceding gene: 145300377
Following gene: 145300385
Centisome position: 80.81
GC content: 57.68
Gene sequence:
>879_bases ATGAAACTGGCACAAGGTCTGTTGTTGAGTCTAGTGGTCACATCGACGGTCGGGGCAAGCGAGGTCAACCTGAGCTGGCA GTGGCAATCTGCTGACGGGCAACAGAAGCGACTGCAACTGAATACCAATGAACGCATCATGTCGGTCAGCCGCCACGAAA TGACCCTGCTCGATGCCGCCCTCAACTATCCGCTGGAGACACTCTACTCCTACATAAGCCCGCGTCTTTACAACAGCATC AATCTCATCAATCAGAACAGTCCCGAGACCGCCACCAAGTTTCGCAATCTGGAGCAGGCCTTCACCCTGCGCGACGACAG CATGGAGTCGACCCTGTTCTGGCAGGCTTACCAGCAATATCAGGACGACGCCTTCTACCAGATGCGGGTCGTGCCCTGCG TTCATCCATCCAACCGCAAGCTGCCCTGCGTGCGCCCCAATTACTCCCAGTTGTTCTACCAGTTCAAGGGGGATCTCAAA CCCCTGGCAAAGCAGTTTTCCGCCAAGGATCTGGCCACCAGCGTCGGCCTGTTGCAGGAGTGGCTGAGCGGTATACCCAC GCCACCGGAACAGATGGATCACTTCGCCCCGCCCCTGCAGGCATTGCAGAACAACAAGGCAGACAGCGATGAGAAGGCAC TGTTGATGGCAAGCCTGCTGGCAGAGCTGGCACCGCAATACATGCTCAGCATCATCTACCCGAATATCAGCATCGGCAGC GTCTCGCCAGCCTGGCTGGCCATCACGGCCGACAGTGGATTGAAAGGGGATACGGTGGTGATCGGCAATCAGCGCCACGT CTTGCTGACAGGTTCGCCCCTGCTGGCCGAGCAGATGACCATGGCCAAGATCCCGCTGGTCAGCGAACCCTTGTACTAG
Upstream 100 bases:
>100_bases AGCCTTATCAGACTGTTACCCAGATCACAAAAACTAAACCAATCCAAATCCGGTCGGCTCACCTAGTTGTTTAGTATCAC CCCGAGCAGGATGCACCATC
Downstream 100 bases:
>100_bases GTTCAACACTCATCAAACCAGTTGATAACCAATTGATTTTTATCGACTGCGTGCCATCCTTGCCGCCTTTGTCAGCCGAG CTCAGCGCTGACGGGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKLAQGLLLSLVVTSTVGASEVNLSWQWQSADGQQKRLQLNTNERIMSVSRHEMTLLDAALNYPLETLYSYISPRLYNSI NLINQNSPETATKFRNLEQAFTLRDDSMESTLFWQAYQQYQDDAFYQMRVVPCVHPSNRKLPCVRPNYSQLFYQFKGDLK PLAKQFSAKDLATSVGLLQEWLSGIPTPPEQMDHFAPPLQALQNNKADSDEKALLMASLLAELAPQYMLSIIYPNISIGS VSPAWLAITADSGLKGDTVVIGNQRHVLLTGSPLLAEQMTMAKIPLVSEPLY
Sequences:
>Translated_292_residues MKLAQGLLLSLVVTSTVGASEVNLSWQWQSADGQQKRLQLNTNERIMSVSRHEMTLLDAALNYPLETLYSYISPRLYNSI NLINQNSPETATKFRNLEQAFTLRDDSMESTLFWQAYQQYQDDAFYQMRVVPCVHPSNRKLPCVRPNYSQLFYQFKGDLK PLAKQFSAKDLATSVGLLQEWLSGIPTPPEQMDHFAPPLQALQNNKADSDEKALLMASLLAELAPQYMLSIIYPNISIGS VSPAWLAITADSGLKGDTVVIGNQRHVLLTGSPLLAEQMTMAKIPLVSEPLY >Mature_292_residues MKLAQGLLLSLVVTSTVGASEVNLSWQWQSADGQQKRLQLNTNERIMSVSRHEMTLLDAALNYPLETLYSYISPRLYNSI NLINQNSPETATKFRNLEQAFTLRDDSMESTLFWQAYQQYQDDAFYQMRVVPCVHPSNRKLPCVRPNYSQLFYQFKGDLK PLAKQFSAKDLATSVGLLQEWLSGIPTPPEQMDHFAPPLQALQNNKADSDEKALLMASLLAELAPQYMLSIIYPNISIGS VSPAWLAITADSGLKGDTVVIGNQRHVLLTGSPLLAEQMTMAKIPLVSEPLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32729; Mature: 32729
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAQGLLLSLVVTSTVGASEVNLSWQWQSADGQQKRLQLNTNERIMSVSRHEMTLLDAA CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH LNYPLETLYSYISPRLYNSINLINQNSPETATKFRNLEQAFTLRDDSMESTLFWQAYQQY HCCCHHHHHHHHCHHHHHHEHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QDDAFYQMRVVPCVHPSNRKLPCVRPNYSQLFYQFKGDLKPLAKQFSAKDLATSVGLLQE CCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH WLSGIPTPPEQMDHFAPPLQALQNNKADSDEKALLMASLLAELAPQYMLSIIYPNISIGS HHHCCCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC VSPAWLAITADSGLKGDTVVIGNQRHVLLTGSPLLAEQMTMAKIPLVSEPLY CCCEEEEEECCCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKLAQGLLLSLVVTSTVGASEVNLSWQWQSADGQQKRLQLNTNERIMSVSRHEMTLLDAA CCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH LNYPLETLYSYISPRLYNSINLINQNSPETATKFRNLEQAFTLRDDSMESTLFWQAYQQY HCCCHHHHHHHHCHHHHHHEHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH QDDAFYQMRVVPCVHPSNRKLPCVRPNYSQLFYQFKGDLKPLAKQFSAKDLATSVGLLQE CCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH WLSGIPTPPEQMDHFAPPLQALQNNKADSDEKALLMASLLAELAPQYMLSIIYPNISIGS HHHCCCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC VSPAWLAITADSGLKGDTVVIGNQRHVLLTGSPLLAEQMTMAKIPLVSEPLY CCCEEEEEECCCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA