| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yehS [H]
Identifier: 145300356
GI number: 145300356
Start: 3774337
End: 3774816
Strand: Direct
Name: yehS [H]
Synonym: ASA_3481
Alternate gene names: 145300356
Gene position: 3774337-3774816 (Clockwise)
Preceding gene: 145300355
Following gene: 145300357
Centisome position: 80.26
GC content: 58.33
Gene sequence:
>480_bases ATGACCAACAACGATATTCTGCGCCGTCTGCGCTACGCCCTCACCATCAGTAACGACCAGATGGTCGAGATGTTTGCCAA AGGCAATCTGACGGTCACTCACGCCCAGTTGCACAGCTGGCTGATGAAAGAGGCGGCTGAAGGGGAAGAGCAGGAAGCGG GCTATGTCGCCTGTCCCGATGCAGCCCTGAGCCAGTTCCTCGACGGCTTCATCATAGCGCGCCGCGGTGTGCGGGAAGAT GCCCCGGCCCAGGTGATCCCGAACCGGATCAACAACAACATGATACTGCGCAAGCTGCGCATCGGCCTGAACTACAAAGA AGAGGACATGCTCGGTACCCTCAAGCTCGCCGACTTCAACCTCTCCAAGTCCGAACTGAGTGCCCTGTTCCGCTCCAAGG ATCACAAGCACTATCAGGATTGCGGGGATCAGATCCTGCGCAACTTCCTCATCGGCCTCACCGCCAAGTACCGCGCCTGA
Upstream 100 bases:
>100_bases CAGCCGCTATCAGCCTCCGTTAATGAACAGAGTCAGCCCTGCTTTTTCTGACGCGGGGCGCGCCAGATGATAAAGTTGCG CCGTTTCTACAGGAGTCAAC
Downstream 100 bases:
>100_bases GTCATGGGCCAGCGTATCTGCTCACTGTCAGCCCGTGTCCCGCTGGCCAGTGGGCGGCGCTGGCCGTCACGCCTTCCTGA ACCAGGCTCAAACGGAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTNNDILRRLRYALTISNDQMVEMFAKGNLTVTHAQLHSWLMKEAAEGEEQEAGYVACPDAALSQFLDGFIIARRGVRED APAQVIPNRINNNMILRKLRIGLNYKEEDMLGTLKLADFNLSKSELSALFRSKDHKHYQDCGDQILRNFLIGLTAKYRA
Sequences:
>Translated_159_residues MTNNDILRRLRYALTISNDQMVEMFAKGNLTVTHAQLHSWLMKEAAEGEEQEAGYVACPDAALSQFLDGFIIARRGVRED APAQVIPNRINNNMILRKLRIGLNYKEEDMLGTLKLADFNLSKSELSALFRSKDHKHYQDCGDQILRNFLIGLTAKYRA >Mature_158_residues TNNDILRRLRYALTISNDQMVEMFAKGNLTVTHAQLHSWLMKEAAEGEEQEAGYVACPDAALSQFLDGFIIARRGVREDA PAQVIPNRINNNMILRKLRIGLNYKEEDMLGTLKLADFNLSKSELSALFRSKDHKHYQDCGDQILRNFLIGLTAKYRA
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=156, Percent_Identity=44.8717948717949, Blast_Score=140, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 18116; Mature: 17985
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNDILRRLRYALTISNDQMVEMFAKGNLTVTHAQLHSWLMKEAAEGEEQEAGYVACPD CCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEECCH AALSQFLDGFIIARRGVREDAPAQVIPNRINNNMILRKLRIGLNYKEEDMLGTLKLADFN HHHHHHHHHHHHHHCCCCCCCCHHHCCHHCCCHHHHHHHHHCCCCCHHHHHEEEEEECCC LSKSELSALFRSKDHKHYQDCGDQILRNFLIGLTAKYRA CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNNDILRRLRYALTISNDQMVEMFAKGNLTVTHAQLHSWLMKEAAEGEEQEAGYVACPD CCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEECCH AALSQFLDGFIIARRGVREDAPAQVIPNRINNNMILRKLRIGLNYKEEDMLGTLKLADFN HHHHHHHHHHHHHHCCCCCCCCHHHCCHHCCCHHHHHHHHHCCCCCHHHHHEEEEEECCC LSKSELSALFRSKDHKHYQDCGDQILRNFLIGLTAKYRA CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]