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The map label for this gene is yddQ [H]

Identifier: 145300217

GI number: 145300217

Start: 3604796

End: 3605347

Strand: Direct

Name: yddQ [H]

Synonym: ASA_3330

Alternate gene names: 145300217

Gene position: 3604796-3605347 (Clockwise)

Preceding gene: 145300216

Following gene: 145300218

Centisome position: 76.66

GC content: 60.51

Gene sequence:

>552_bases
ATGGATGTGTTACTGGTCATCGACATGCAACAAGGGCTGTTTGCTCATCCCCGCCATCAGGACGCGCAGGTCATTGCCAA
TATCAATCGTCTGGCAGACAGCGTGCGGGCCAATCAGGGCCGTGTCATCTATGTGCAGCACGACGCACCGGGTTCTGAAC
TGGAACCCGGCAGTGCAGCCTGGCAGCTTCACGCCGATTTGATCCCGGCGCGCAGCGACAGCAGGGTGAGCAAGACCGCC
TGCGACAGCTTCCTCGATACAGAGCTCGGCTTTCTGCTGGCGGAACAGGCAGTGGATCGCCTGCTGATCTGCGGTTGTGC
CACCGATTTTTGTGTCGACACCACGCTGCGCAGCGCCGCCGCCCGGGGATTTGACGTATTCGCGGTGACGGATGCCCACA
CCACGGCGGATCGTCCTCACCTGAGTGCAGAAAAAATCATCGAGCATCACCACTGGATGTGGGAGCACCTGAGCCTGCCA
AAGGGCAGAACCGTGACCCTGCTCACGACGGATGCGTTGCTCGAAGCCACCCAGCCCGAGCTGGCGTGTTAA

Upstream 100 bases:

>100_bases
ATGCAGATGAAATGAAGCAAGATATGGGCGCACTGCATCAATCCCGAAGCCGTGACTGCAGCCAATGGCTGCAACCCTGA
AAATCGCCTAAGGATTCCAT

Downstream 100 bases:

>100_bases
TCTGCCAGCCTTGAAGTGATCACCGGATTGGAGTCTTGTGTGCGTCTACTGTCTGCCGTTGCATTCATGCTGTTGTTACC
GGCAATTTCTGCCTGCTCCG

Product: isochorismatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDVLLVIDMQQGLFAHPRHQDAQVIANINRLADSVRANQGRVIYVQHDAPGSELEPGSAAWQLHADLIPARSDSRVSKTA
CDSFLDTELGFLLAEQAVDRLLICGCATDFCVDTTLRSAAARGFDVFAVTDAHTTADRPHLSAEKIIEHHHWMWEHLSLP
KGRTVTLLTTDALLEATQPELAC

Sequences:

>Translated_183_residues
MDVLLVIDMQQGLFAHPRHQDAQVIANINRLADSVRANQGRVIYVQHDAPGSELEPGSAAWQLHADLIPARSDSRVSKTA
CDSFLDTELGFLLAEQAVDRLLICGCATDFCVDTTLRSAAARGFDVFAVTDAHTTADRPHLSAEKIIEHHHWMWEHLSLP
KGRTVTLLTTDALLEATQPELAC
>Mature_183_residues
MDVLLVIDMQQGLFAHPRHQDAQVIANINRLADSVRANQGRVIYVQHDAPGSELEPGSAAWQLHADLIPARSDSRVSKTA
CDSFLDTELGFLLAEQAVDRLLICGCATDFCVDTTLRSAAARGFDVFAVTDAHTTADRPHLSAEKIIEHHHWMWEHLSLP
KGRTVTLLTTDALLEATQPELAC

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20117; Mature: 20117

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLLVIDMQQGLFAHPRHQDAQVIANINRLADSVRANQGRVIYVQHDAPGSELEPGSAA
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCE
WQLHADLIPARSDSRVSKTACDSFLDTELGFLLAEQAVDRLLICGCATDFCVDTTLRSAA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHH
ARGFDVFAVTDAHTTADRPHLSAEKIIEHHHWMWEHLSLPKGRTVTLLTTDALLEATQPE
HCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCC
LAC
CCC
>Mature Secondary Structure
MDVLLVIDMQQGLFAHPRHQDAQVIANINRLADSVRANQGRVIYVQHDAPGSELEPGSAA
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCE
WQLHADLIPARSDSRVSKTACDSFLDTELGFLLAEQAVDRLLICGCATDFCVDTTLRSAA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCHHHHHHHHHHHH
ARGFDVFAVTDAHTTADRPHLSAEKIIEHHHWMWEHLSLPKGRTVTLLTTDALLEATQPE
HCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHCCCCC
LAC
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]