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The map label for this gene is ybdF [H]

Identifier: 145299506

GI number: 145299506

Start: 2751346

End: 2751702

Strand: Direct

Name: ybdF [H]

Synonym: ASA_2573

Alternate gene names: 145299506

Gene position: 2751346-2751702 (Clockwise)

Preceding gene: 145299504

Following gene: 145299507

Centisome position: 58.51

GC content: 62.75

Gene sequence:

>357_bases
ATGGAGTTGACGAGTTTGAGAGCCTTTCTGCTGACCCTGCCGGGCGCTCAGGAGGACACCCCCTTCGGCCCGGAGATCCT
GGTCTATCGCATCGCAGGCAAGATGTTTGCGCTGGTGGATTGGCAGGCAGAGCCGCTCACCATCAACCTCAAATGCGAGC
CCGACCTCGCCCTGCTGCTGCGGGAGATCCATCCCGAGGTCAAACCCGGCTGGCACATGAACAAGCAGCACTGGAACACG
GTTACCCTGAGCAACACCCTGGCCAGCGATCTTTGGCAAGGCTGGGTGCGCCACTCCTATGAGCGGGTGGTCGCCGGCCT
GCCCAAGGCCAAACGGCCGCAAGCGCCGACACTGTGA

Upstream 100 bases:

>100_bases
ACTCCCTCATCGACGGCATTGGGGTATAGTAGGCGCGCATCTTAGCAGATATTTTCACCTAAAAAATACGTTTGCATGGC
AACTGGCGAGGAGCGTGACC

Downstream 100 bases:

>100_bases
GCCACCCCATGCCGGAGCAGCCCAAAATAGTCCCGCTGAGCGAGCCGCATATCCCCGCCCTCATCACACTGTTCGAGCAG
TCGGTGCGCCAACGCGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MELTSLRAFLLTLPGAQEDTPFGPEILVYRIAGKMFALVDWQAEPLTINLKCEPDLALLLREIHPEVKPGWHMNKQHWNT
VTLSNTLASDLWQGWVRHSYERVVAGLPKAKRPQAPTL

Sequences:

>Translated_118_residues
MELTSLRAFLLTLPGAQEDTPFGPEILVYRIAGKMFALVDWQAEPLTINLKCEPDLALLLREIHPEVKPGWHMNKQHWNT
VTLSNTLASDLWQGWVRHSYERVVAGLPKAKRPQAPTL
>Mature_118_residues
MELTSLRAFLLTLPGAQEDTPFGPEILVYRIAGKMFALVDWQAEPLTINLKCEPDLALLLREIHPEVKPGWHMNKQHWNT
VTLSNTLASDLWQGWVRHSYERVVAGLPKAKRPQAPTL

Specific function: Unknown

COG id: COG2315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786793, Length=104, Percent_Identity=41.3461538461538, Blast_Score=77, Evalue=3e-16,
Organism=Escherichia coli, GI2367342, Length=112, Percent_Identity=32.1428571428571, Blast_Score=66, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007351 [H]

Pfam domain/function: PF04237 DUF419 [H]

EC number: NA

Molecular weight: Translated: 13424; Mature: 13424

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTSLRAFLLTLPGAQEDTPFGPEILVYRIAGKMFALVDWQAEPLTINLKCEPDLALLL
CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCHHHHH
REIHPEVKPGWHMNKQHWNTVTLSNTLASDLWQGWVRHSYERVVAGLPKAKRPQAPTL
HHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MELTSLRAFLLTLPGAQEDTPFGPEILVYRIAGKMFALVDWQAEPLTINLKCEPDLALLL
CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCHHHHH
REIHPEVKPGWHMNKQHWNTVTLSNTLASDLWQGWVRHSYERVVAGLPKAKRPQAPTL
HHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]