| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is mltF [H]
Identifier: 145299265
GI number: 145299265
Start: 2445773
End: 2447290
Strand: Direct
Name: mltF [H]
Synonym: ASA_2309
Alternate gene names: 145299265
Gene position: 2445773-2447290 (Clockwise)
Preceding gene: 145299264
Following gene: 145299266
Centisome position: 52.01
GC content: 57.84
Gene sequence:
>1518_bases ATGAAAAGGTTATGGATCATTCTGGGCTGGATGCTGTGCTGCCTGGCGCCAGCCACGGCGGCTGAACAGACGGCAGCGCC CGACGAAGTACCAGCGTCCCTGGCATTTAGCGCAGAGGAACTGTCCCGCCCTCGGTTGGGTGACCTCGATGACATGCTGG CGCGACGCACCATCCGGGTGCTCACCACCTACAACAAGACCGGCTACTTCATCAACAAGGGGGTCCAACGGGGCGTAACC TACGACGCTTTCATGCAGGTAGAAAAACGGCTCAACGATCAGCTGCGCAAACAGAAGGCCATCAAGCGCCACCTCAAGCT GCAGTTCGTCTTCATTCCGGTTGCCCGTGAGGCCCTGCTGCAAGCCCTGATCGACGGCAAAGGTGACATAGCGGCAGCCA ACCTGACCATCACGGATCAGCGCAAAAAGCAGGGCGTGGCGTTTACCAATCCCTTATTGGAAAACGTGCGGGAACTGCTG ATCTCGGGGCCTCACTCACCCAGGGTGGAGAGTGTCGCCGAACTCGGCGGCCAAACTGTCCATGTGCGCCCCTCTTCAAG TTACTTCGAGAGCCTCATCGCCTATAACCAGGCCCGCAAAGCCGCGGGAGAGCCGCTCATCGACATCAAGCCGGCACCGG AATCTCTGGAAGATGAGGATCTGGTGGAGATGGTCAATGCTGGCCTGCTGCCCTTCATCGTCATGGATGAGCACAAGGCT CGTTTCTGGAAGAAGATTTTTCCCGCCATCCAGATCCACGAACAACCCGCATTCCGTGAAGGGGGGGTCATCGCCTGGGC GGTACGCAAGGAGAGTCCCAAGTTGCTCGCCATGCTCAACGAGCAGATAGCAGCCCAACGGGGCAAGGCCACAGGAGAGG ACATCCTGGCCCGTTACCTCAAGCAGAACAAATTCGTCAAGAGCGCTGCCGCCGAGACTGAGCGCAAGAAATTCCTGCAG CTGGTAGATCTGTTTCGCCAGTATGGCGATCGTTTCGATGTGGACTGGCTGCTGATCGCGGCTCAGGGCTATCAGGAGTC GGCACTCAACCACAAGGCGCGCAGCCCAGTCGGTGCCATCGGCATCATGCAGATCATGCCCGCCACCGGCAAAGGTCTGA AGGTAGGCGACATTCGCCAGCTCGAACCCAACATCCACGGAGGCGTCAAATACATGCGCTGGATGATCGATCACTACTAC GCCGACGAGCCCATGACGGCCCTCGACAAGGCCTTGTTTTCATTTGCTTCCTACAATGCCGGCCCTGCACGGGTGGCACG ACTGCGGACAGAGGCCAAGAAACGGGGACTGGATCCCAACATCTGGTTTCATAACGTCGAGTATGTGGCGGCCGAGAAAA TAGGGCCAGACCCAGTGACCTACGTGGGCAACATCTACAAGTACTACATCGCCTACAAGCTGGTGATGGAGCAGCTGCAG CTCAAACAGCAGGCCACTGAAACCATCAAACAGCAGGAGACCATCGGTGACAAGGTTTCCTCCGCGACAAAAACATAG
Upstream 100 bases:
>100_bases TAGAGCCAATGGTGCTATCTGACACGTTGCACCAAACTCAATGAGCTAAGTAGCCCCTTGCCTGCCACTTACACTCAATG AAAAGGGTGAGGTACTCATC
Downstream 100 bases:
>100_bases CGGCGACCAAGCCGCTGCCAGCACGAACCAGGCTCCCCACTTTTTACGCGGTGAGCCTGATGTTTTTTACCTCCAGCTCC TTGCCAACGCGACATCAGGC
Product: Slt family transglycosylase
Products: NA
Alternate protein names: Murein lyase F [H]
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MKRLWIILGWMLCCLAPATAAEQTAAPDEVPASLAFSAEELSRPRLGDLDDMLARRTIRVLTTYNKTGYFINKGVQRGVT YDAFMQVEKRLNDQLRKQKAIKRHLKLQFVFIPVAREALLQALIDGKGDIAAANLTITDQRKKQGVAFTNPLLENVRELL ISGPHSPRVESVAELGGQTVHVRPSSSYFESLIAYNQARKAAGEPLIDIKPAPESLEDEDLVEMVNAGLLPFIVMDEHKA RFWKKIFPAIQIHEQPAFREGGVIAWAVRKESPKLLAMLNEQIAAQRGKATGEDILARYLKQNKFVKSAAAETERKKFLQ LVDLFRQYGDRFDVDWLLIAAQGYQESALNHKARSPVGAIGIMQIMPATGKGLKVGDIRQLEPNIHGGVKYMRWMIDHYY ADEPMTALDKALFSFASYNAGPARVARLRTEAKKRGLDPNIWFHNVEYVAAEKIGPDPVTYVGNIYKYYIAYKLVMEQLQ LKQQATETIKQQETIGDKVSSATKT
Sequences:
>Translated_505_residues MKRLWIILGWMLCCLAPATAAEQTAAPDEVPASLAFSAEELSRPRLGDLDDMLARRTIRVLTTYNKTGYFINKGVQRGVT YDAFMQVEKRLNDQLRKQKAIKRHLKLQFVFIPVAREALLQALIDGKGDIAAANLTITDQRKKQGVAFTNPLLENVRELL ISGPHSPRVESVAELGGQTVHVRPSSSYFESLIAYNQARKAAGEPLIDIKPAPESLEDEDLVEMVNAGLLPFIVMDEHKA RFWKKIFPAIQIHEQPAFREGGVIAWAVRKESPKLLAMLNEQIAAQRGKATGEDILARYLKQNKFVKSAAAETERKKFLQ LVDLFRQYGDRFDVDWLLIAAQGYQESALNHKARSPVGAIGIMQIMPATGKGLKVGDIRQLEPNIHGGVKYMRWMIDHYY ADEPMTALDKALFSFASYNAGPARVARLRTEAKKRGLDPNIWFHNVEYVAAEKIGPDPVTYVGNIYKYYIAYKLVMEQLQ LKQQATETIKQQETIGDKVSSATKT >Mature_505_residues MKRLWIILGWMLCCLAPATAAEQTAAPDEVPASLAFSAEELSRPRLGDLDDMLARRTIRVLTTYNKTGYFINKGVQRGVT YDAFMQVEKRLNDQLRKQKAIKRHLKLQFVFIPVAREALLQALIDGKGDIAAANLTITDQRKKQGVAFTNPLLENVRELL ISGPHSPRVESVAELGGQTVHVRPSSSYFESLIAYNQARKAAGEPLIDIKPAPESLEDEDLVEMVNAGLLPFIVMDEHKA RFWKKIFPAIQIHEQPAFREGGVIAWAVRKESPKLLAMLNEQIAAQRGKATGEDILARYLKQNKFVKSAAAETERKKFLQ LVDLFRQYGDRFDVDWLLIAAQGYQESALNHKARSPVGAIGIMQIMPATGKGLKVGDIRQLEPNIHGGVKYMRWMIDHYY ADEPMTALDKALFSFASYNAGPARVARLRTEAKKRGLDPNIWFHNVEYVAAEKIGPDPVTYVGNIYKYYIAYKLVMEQLQ LKQQATETIKQQETIGDKVSSATKT
Specific function: Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the
COG id: COG4623
COG function: function code M; Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein. Note=Attached to the inner leaflet of the outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI171474010, Length=486, Percent_Identity=25.1028806584362, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87082441, Length=211, Percent_Identity=28.9099526066351, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 - InterPro: IPR001638 - InterPro: IPR000189 [H]
Pfam domain/function: PF00497 SBP_bac_3; PF01464 SLT [H]
EC number: NA
Molecular weight: Translated: 56771; Mature: 56771
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLWIILGWMLCCLAPATAAEQTAAPDEVPASLAFSAEELSRPRLGDLDDMLARRTIRV CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHEECHHHHCCCCCCCHHHHHHHHHHHH LTTYNKTGYFINKGVQRGVTYDAFMQVEKRLNDQLRKQKAIKRHLKLQFVFIPVAREALL HEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHH QALIDGKGDIAAANLTITDQRKKQGVAFTNPLLENVRELLISGPHSPRVESVAELGGQTV HHHHCCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEE HVRPSSSYFESLIAYNQARKAAGEPLIDIKPAPESLEDEDLVEMVNAGLLPFIVMDEHKA EECCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHCCCCCEEEEECCHHH RFWKKIFPAIQIHEQPAFREGGVIAWAVRKESPKLLAMLNEQIAAQRGKATGEDILARYL HHHHHHCCHHEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH KQNKFVKSAAAETERKKFLQLVDLFRQYGDRFDVDWLLIAAQGYQESALNHKARSPVGAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHH GIMQIMPATGKGLKVGDIRQLEPNIHGGVKYMRWMIDHYYADEPMTALDKALFSFASYNA HHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC GPARVARLRTEAKKRGLDPNIWFHNVEYVAAEKIGPDPVTYVGNIYKYYIAYKLVMEQLQ CHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LKQQATETIKQQETIGDKVSSATKT HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRLWIILGWMLCCLAPATAAEQTAAPDEVPASLAFSAEELSRPRLGDLDDMLARRTIRV CCHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHEECHHHHCCCCCCCHHHHHHHHHHHH LTTYNKTGYFINKGVQRGVTYDAFMQVEKRLNDQLRKQKAIKRHLKLQFVFIPVAREALL HEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHH QALIDGKGDIAAANLTITDQRKKQGVAFTNPLLENVRELLISGPHSPRVESVAELGGQTV HHHHCCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEE HVRPSSSYFESLIAYNQARKAAGEPLIDIKPAPESLEDEDLVEMVNAGLLPFIVMDEHKA EECCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHCCCCCEEEEECCHHH RFWKKIFPAIQIHEQPAFREGGVIAWAVRKESPKLLAMLNEQIAAQRGKATGEDILARYL HHHHHHCCHHEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH KQNKFVKSAAAETERKKFLQLVDLFRQYGDRFDVDWLLIAAQGYQESALNHKARSPVGAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHH GIMQIMPATGKGLKVGDIRQLEPNIHGGVKYMRWMIDHYYADEPMTALDKALFSFASYNA HHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC GPARVARLRTEAKKRGLDPNIWFHNVEYVAAEKIGPDPVTYVGNIYKYYIAYKLVMEQLQ CHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LKQQATETIKQQETIGDKVSSATKT HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA