Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

Click here to switch to the map view.

The map label for this gene is yczJ [H]

Identifier: 145299233

GI number: 145299233

Start: 2401736

End: 2402077

Strand: Direct

Name: yczJ [H]

Synonym: ASA_2275

Alternate gene names: 145299233

Gene position: 2401736-2402077 (Clockwise)

Preceding gene: 145299232

Following gene: 145299237

Centisome position: 51.07

GC content: 60.82

Gene sequence:

>342_bases
ATGATATTGGAAGTCGCCCATCTGCAGGTTATCCCGGGTCAGGCCGCCGCCTTCGAACAGGCTTTTGGGCAAGCCCAGAC
CATCATCAGTGCCATGCCAGGGTACGCCGGGCACCAGTTGCAGCGCTCGCTGACCGATCCTCACCGTTATCTGTTGCTGG
TCAGCTGGCAGCGGCTCGAAGATCACACCCAGGGCTTTCGCGGCTCCGCTCAGTACCAGCAATGGAAGGCACTGCTGCAC
CATTTCTACGACCCCTTCCCCACAGTGGAACACTATCAGGCAGTGGAACACTGTCAGGCTGTCGCGCTGGGAGTGAACAC
GGCGGCCCTGCCTGCCGTGTGA

Upstream 100 bases:

>100_bases
TGATGATCGACAACGAACAAGGCCAGCCTGACGGCTGGCCTTGTTCGTTGTGGTCTGAACTGCTGAAATGGCGCTTCCCC
CGTCAAGACAAGGAGTCATC

Downstream 100 bases:

>100_bases
TCATCGGCTCGCAAGCCGGGATGATCAGGCCAACCGCTCGGCGCGCACCTTGATCACTGGCTCGGCAAACGCATCCTGGG
CTGAAATCAGTTGCAGTTCG

Product: antibiotic biosynthesis monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MILEVAHLQVIPGQAAAFEQAFGQAQTIISAMPGYAGHQLQRSLTDPHRYLLLVSWQRLEDHTQGFRGSAQYQQWKALLH
HFYDPFPTVEHYQAVEHCQAVALGVNTAALPAV

Sequences:

>Translated_113_residues
MILEVAHLQVIPGQAAAFEQAFGQAQTIISAMPGYAGHQLQRSLTDPHRYLLLVSWQRLEDHTQGFRGSAQYQQWKALLH
HFYDPFPTVEHYQAVEHCQAVALGVNTAALPAV
>Mature_113_residues
MILEVAHLQVIPGQAAAFEQAFGQAQTIISAMPGYAGHQLQRSLTDPHRYLLLVSWQRLEDHTQGFRGSAQYQQWKALLH
HFYDPFPTVEHYQAVEHCQAVALGVNTAALPAV

Specific function: Unknown

COG id: COG2329

COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 12633; Mature: 12633

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEVAHLQVIPGQAAAFEQAFGQAQTIISAMPGYAGHQLQRSLTDPHRYLLLVSWQRLE
CEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHEEHHHHHHHHH
DHTQGFRGSAQYQQWKALLHHFYDPFPTVEHYQAVEHCQAVALGVNTAALPAV
HHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MILEVAHLQVIPGQAAAFEQAFGQAQTIISAMPGYAGHQLQRSLTDPHRYLLLVSWQRLE
CEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHEEHHHHHHHHH
DHTQGFRGSAQYQQWKALLHHFYDPFPTVEHYQAVEHCQAVALGVNTAALPAV
HHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]