| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299230
Identifier: 145299230
GI number: 145299230
Start: 2399120
End: 2399551
Strand: Direct
Name: 145299230
Synonym: ASA_2272
Alternate gene names: NA
Gene position: 2399120-2399551 (Clockwise)
Preceding gene: 145299229
Following gene: 145299231
Centisome position: 51.02
GC content: 60.65
Gene sequence:
>432_bases ATGCTCTCTACTGACCATTTGAACCACCGGGACACAATCATGATCGACAAACTCGCCTGGCTGACCTTCAAGGATCAGCA ACTGCTCTGCGCCCGTTCCCACGGCAAGGCCATCTACTACATTCCCGGCGGCAAACGCGAGGCGGGAGAGAGCGATGAAG CGGCGCTGATGCGAGAAATCGAGGAGGAGCTGAGCGTGACCCTGCAAGCCGACACCTTGCGCCTTGCCTGCGAATTCAGC GCCCAGGCCGATGGCAAGCCTGAAGGCGTGCAGGTCCGATTGCGCTGTTACACCGGTGAAGCCAGCGGTACACCTGTTGC CTCGGCCGAGATCGCCGAACTGCGCTGGCTCGATAGCCGCCACCTCGAACAGATTTCCCCCGTGTCCCGCCTGCTGTTCG CCTGGCTGGCAGAGCAAAACCTTATCCGCTAA
Upstream 100 bases:
>100_bases AGCATAGCCAACAGCTCATTTAAGGGAAAAAGCAAATGGGCTACATTTGGTGGCGATCATCCACAAGATCTGCTGCCGGA ACCGACTGAAAAATACGTGA
Downstream 100 bases:
>100_bases GACGTGCGGCTGATGAACCCGTGGTGGGGCTGATGGACAAGCGTGATCCTGCGCACCCTGCAGAGGTGCCCGACTTGAAA TCGGCACCAGAAAAGGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT Family Protein; MutT/NUDIX Family Protein; Nudix Family Protein MutT Subfamily; Hydrolase Nudix Family; Nudix Hydrolase; ADP-Ribose Pyrophosphatase; Nudix Superfamily Hydrolase; Lysine Decarboxylase; MutT-Family Protein; NUDIX Domain-Containing Protein
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MLSTDHLNHRDTIMIDKLAWLTFKDQQLLCARSHGKAIYYIPGGKREAGESDEAALMREIEEELSVTLQADTLRLACEFS AQADGKPEGVQVRLRCYTGEASGTPVASAEIAELRWLDSRHLEQISPVSRLLFAWLAEQNLIR
Sequences:
>Translated_143_residues MLSTDHLNHRDTIMIDKLAWLTFKDQQLLCARSHGKAIYYIPGGKREAGESDEAALMREIEEELSVTLQADTLRLACEFS AQADGKPEGVQVRLRCYTGEASGTPVASAEIAELRWLDSRHLEQISPVSRLLFAWLAEQNLIR >Mature_143_residues MLSTDHLNHRDTIMIDKLAWLTFKDQQLLCARSHGKAIYYIPGGKREAGESDEAALMREIEEELSVTLQADTLRLACEFS AQADGKPEGVQVRLRCYTGEASGTPVASAEIAELRWLDSRHLEQISPVSRLLFAWLAEQNLIR
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16083; Mature: 16083
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTDHLNHRDTIMIDKLAWLTFKDQQLLCARSHGKAIYYIPGGKREAGESDEAALMREI CCCCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHH EEELSVTLQADTLRLACEFSAQADGKPEGVQVRLRCYTGEASGTPVASAEIAELRWLDSR HHHHEEEEEECEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCHH HLEQISPVSRLLFAWLAEQNLIR HHHHHCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLSTDHLNHRDTIMIDKLAWLTFKDQQLLCARSHGKAIYYIPGGKREAGESDEAALMREI CCCCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHH EEELSVTLQADTLRLACEFSAQADGKPEGVQVRLRCYTGEASGTPVASAEIAELRWLDSR HHHHEEEEEECEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCHH HLEQISPVSRLLFAWLAEQNLIR HHHHHCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA