| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299185
Identifier: 145299185
GI number: 145299185
Start: 2349829
End: 2351136
Strand: Direct
Name: 145299185
Synonym: ASA_2217
Alternate gene names: NA
Gene position: 2349829-2351136 (Clockwise)
Preceding gene: 145299183
Following gene: 145299189
Centisome position: 49.97
GC content: 61.85
Gene sequence:
>1308_bases ATGAACCAGTCGACAGAAAAGCAGCCGGTTTCATCCTGGCATGTGTCGGACATCCGCGAGCTGGCCAGATTGCTCACACA AGCCCTGCCCGCCGCCATACAGATCACGGAGGCTGTCTACCAGGCGGTATTGAGTGGCATGGGCATAAAGGGCAAGGGTG AGGGGAAAACCCGAGGCATCACAGGTTTTGTCTACCGGGGGATCCACAGGGCGGCCGATCAGCTCGGCAGTGGCATCAAT GCCGTGCTCGCCCGCGTGCCGGGGCCGCTCGCTCAGGAAGCCATCTCCGAAACCCCCAAACGCGCCGCCCTGCTCGCCAC CCTCAACGGCGTGATGGGAGACAAGCTGGTCGCCAGCCACAATGCCCTCGCCACCCCCATGACACTGCGCTATCAAGGTG CGCCCCTGAACTGGCACGCCATGCCCCCTGAACTTGCTGGTCAAAGCCGGGTGCTGCTGATGGTGCATGGCCTCTGCATG AATGATCTGCAGTGGCAAACCCAAACCAAGGGGAAGGACAAAGAGCAGATGCTCAACCATGGGGAGATACTGGCCAGCAC CCTGGGTTATATGCCCGTCTATCTGCGCTACAACTCAGGGCTGCCGATTTCGCAAAACGGGCGGGAACTGGCGAGCCAGC TGGCGCAGCTGGTGACTCACTGGCCCGGCCACATCAGCGAGATAAGCGTGCTGGCCTACAGCATGGGCGGGCTGGTGATC CGCAGCGCCTGTCACTATGCCAGTCAGAGCGAGGCGAGCTGGCCAAACGTCCTGAGAAATCTGGTGTTTCTGGGGACCCC CCATCATGGGGCCCCCCTGGAACACGCAGGTCACTGGCTGGAACAACTGCTGCCTGCCACCGCCTACACCGAGCCGTTTG TCAGACTGGCACGGCTGCGCAGTGCGGGTATCAAGGATCTGCGCCACGGCACCCTGCTCGACGACCAAGACCCTACCCGC GATACAGCGTCAACGGATCCGCGCCCGTCTTTGCCCCTGCCGGCAGGCGTCGCCTGCTTTGCAATAGCCGCCACGACGGC AGCCAAACGCAATCTGTTGGCAGATAGATTGATTGGCGATGGTCTGGTCCCCCTGCGCAGTGCCCTTGGGCAGCACAAGG AAGCCCGCCACCAGCTGGCATTTGCGCCATCCCACTGCTGGATTGCCTATCGCACCAGCCATATGGCCCTGCTCGGCAGC CCCCAGGTGACCCATCAACTGCTGCACTGGCTCACGCCTCTTCACCAACAAGCAGAGGATGGCTGCCCGTCAGAGGAAAA TGCACAAGCTGTTCCCCTTGCTCAATAA
Upstream 100 bases:
>100_bases CCCGAGGCAAACACGGCAAGCTGGATGTGTCTGTGTTGGCCAGACGCGTGCCTCTGTGGGGATGCATGCCTTGCTGACAC CCTATTCCCGAGGGCACCCC
Downstream 100 bases:
>100_bases GCTGACATCCGCCCCCATAATGAAAAATCCGCCAACTGGCGGATGTTTCATTGCATGTCGGTCACATCAAGCGGGCACGG CCGAAGACCCTGATTGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: PGAP1-Like; PGAP1-Like Protein; Pgap1 Family Protein
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNQSTEKQPVSSWHVSDIRELARLLTQALPAAIQITEAVYQAVLSGMGIKGKGEGKTRGITGFVYRGIHRAADQLGSGIN AVLARVPGPLAQEAISETPKRAALLATLNGVMGDKLVASHNALATPMTLRYQGAPLNWHAMPPELAGQSRVLLMVHGLCM NDLQWQTQTKGKDKEQMLNHGEILASTLGYMPVYLRYNSGLPISQNGRELASQLAQLVTHWPGHISEISVLAYSMGGLVI RSACHYASQSEASWPNVLRNLVFLGTPHHGAPLEHAGHWLEQLLPATAYTEPFVRLARLRSAGIKDLRHGTLLDDQDPTR DTASTDPRPSLPLPAGVACFAIAATTAAKRNLLADRLIGDGLVPLRSALGQHKEARHQLAFAPSHCWIAYRTSHMALLGS PQVTHQLLHWLTPLHQQAEDGCPSEENAQAVPLAQ
Sequences:
>Translated_435_residues MNQSTEKQPVSSWHVSDIRELARLLTQALPAAIQITEAVYQAVLSGMGIKGKGEGKTRGITGFVYRGIHRAADQLGSGIN AVLARVPGPLAQEAISETPKRAALLATLNGVMGDKLVASHNALATPMTLRYQGAPLNWHAMPPELAGQSRVLLMVHGLCM NDLQWQTQTKGKDKEQMLNHGEILASTLGYMPVYLRYNSGLPISQNGRELASQLAQLVTHWPGHISEISVLAYSMGGLVI RSACHYASQSEASWPNVLRNLVFLGTPHHGAPLEHAGHWLEQLLPATAYTEPFVRLARLRSAGIKDLRHGTLLDDQDPTR DTASTDPRPSLPLPAGVACFAIAATTAAKRNLLADRLIGDGLVPLRSALGQHKEARHQLAFAPSHCWIAYRTSHMALLGS PQVTHQLLHWLTPLHQQAEDGCPSEENAQAVPLAQ >Mature_435_residues MNQSTEKQPVSSWHVSDIRELARLLTQALPAAIQITEAVYQAVLSGMGIKGKGEGKTRGITGFVYRGIHRAADQLGSGIN AVLARVPGPLAQEAISETPKRAALLATLNGVMGDKLVASHNALATPMTLRYQGAPLNWHAMPPELAGQSRVLLMVHGLCM NDLQWQTQTKGKDKEQMLNHGEILASTLGYMPVYLRYNSGLPISQNGRELASQLAQLVTHWPGHISEISVLAYSMGGLVI RSACHYASQSEASWPNVLRNLVFLGTPHHGAPLEHAGHWLEQLLPATAYTEPFVRLARLRSAGIKDLRHGTLLDDQDPTR DTASTDPRPSLPLPAGVACFAIAATTAAKRNLLADRLIGDGLVPLRSALGQHKEARHQLAFAPSHCWIAYRTSHMALLGS PQVTHQLLHWLTPLHQQAEDGCPSEENAQAVPLAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47126; Mature: 47126
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSTEKQPVSSWHVSDIRELARLLTQALPAAIQITEAVYQAVLSGMGIKGKGEGKTRGI CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TGFVYRGIHRAADQLGSGINAVLARVPGPLAQEAISETPKRAALLATLNGVMGDKLVASH HHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCC NALATPMTLRYQGAPLNWHAMPPELAGQSRVLLMVHGLCMNDLQWQTQTKGKDKEQMLNH CCCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEHHHHHHHCCCCCCHHCCCCCHHHHHHH GEILASTLGYMPVYLRYNSGLPISQNGRELASQLAQLVTHWPGHISEISVLAYSMGGLVI HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RSACHYASQSEASWPNVLRNLVFLGTPHHGAPLEHAGHWLEQLLPATAYTEPFVRLARLR HHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH SAGIKDLRHGTLLDDQDPTRDTASTDPRPSLPLPAGVACFAIAATTAAKRNLLADRLIGD HHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GLVPLRSALGQHKEARHQLAFAPSHCWIAYRTSHMALLGSPQVTHQLLHWLTPLHQQAED CCHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHC GCPSEENAQAVPLAQ CCCCCCCCCCCCCCC >Mature Secondary Structure MNQSTEKQPVSSWHVSDIRELARLLTQALPAAIQITEAVYQAVLSGMGIKGKGEGKTRGI CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TGFVYRGIHRAADQLGSGINAVLARVPGPLAQEAISETPKRAALLATLNGVMGDKLVASH HHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCC NALATPMTLRYQGAPLNWHAMPPELAGQSRVLLMVHGLCMNDLQWQTQTKGKDKEQMLNH CCCCCCEEEEECCCCCCCCCCCHHHCCCCEEEEHHHHHHHCCCCCCHHCCCCCHHHHHHH GEILASTLGYMPVYLRYNSGLPISQNGRELASQLAQLVTHWPGHISEISVLAYSMGGLVI HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RSACHYASQSEASWPNVLRNLVFLGTPHHGAPLEHAGHWLEQLLPATAYTEPFVRLARLR HHHHHHCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH SAGIKDLRHGTLLDDQDPTRDTASTDPRPSLPLPAGVACFAIAATTAAKRNLLADRLIGD HHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC GLVPLRSALGQHKEARHQLAFAPSHCWIAYRTSHMALLGSPQVTHQLLHWLTPLHQQAED CCHHHHHHHCHHHHHHHHHHCCCCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHC GCPSEENAQAVPLAQ CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA