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The map label for this gene is ycfJ [H]

Identifier: 145299174

GI number: 145299174

Start: 2336883

End: 2337425

Strand: Direct

Name: ycfJ [H]

Synonym: ASA_2205

Alternate gene names: 145299174

Gene position: 2336883-2337425 (Clockwise)

Preceding gene: 145299173

Following gene: 145299176

Centisome position: 49.7

GC content: 61.88

Gene sequence:

>543_bases
ATGAACAAATCCATGTTGGCAGGTGTCGGGATCGGTGTGGCCTCTGCGCTGGCATTGTCGGCCGCAGCCAGCGGATCCCT
GTTTTCATCCAAGCCCCAGTTTGCCGAGGTACTGGCCAGCAATCCGGTGACCGAGACCATCAAGACACCCCGTCAGGAGT
GCCGCAACGTCACTGTGACCCACCGCAAACCCGTGCAGGATGAGAACAAGATCCTGGGTACAGTGGTTGGCGCCGCGCTC
GGGGGCGTGCTTGGCAACCAGTTTGGCGGTGGCAGTGGCAAGAAGGTAGCAACAGCCGCGGGGGCCGTGGCCGGTGGTTA
TGCAGGCAATCAGGTGCAGGGCAATATGCAGGCGGGTGATACCTACACCACCACGCAGCAGCGCTGCAAGACGGTGCAGG
ATAGCAGTACCCGTACGCTTGGCTACGACGTCACCTACCGCCTCGCCGGACAAGAGGGGGTCATCCGCATGGAGAAGGCC
CCCGGCGCCACCATACCGGTCAAGGATGGCAAGCTGGTGATCGACAGCCAGAGTCAATCCTGA

Upstream 100 bases:

>100_bases
GTCGTGCCTGAGCGGTGCGTGCCTTGTTCATCCCCCGGGTTGTGCCAAGATCGCGGCAAGCAACAGCCGCATCAGGTGAT
GCATTTCAGGAGAACGAAAA

Downstream 100 bases:

>100_bases
CAAGCCCCGTCCTATGAGCACCCCAAGGCCCATCACACCGATGGGTCTTTTTGTTGCGCACGCCCCTACGCTGCTCACCA
GCAAGGCATTGGACTCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNKSMLAGVGIGVASALALSAAASGSLFSSKPQFAEVLASNPVTETIKTPRQECRNVTVTHRKPVQDENKILGTVVGAAL
GGVLGNQFGGGSGKKVATAAGAVAGGYAGNQVQGNMQAGDTYTTTQQRCKTVQDSSTRTLGYDVTYRLAGQEGVIRMEKA
PGATIPVKDGKLVIDSQSQS

Sequences:

>Translated_180_residues
MNKSMLAGVGIGVASALALSAAASGSLFSSKPQFAEVLASNPVTETIKTPRQECRNVTVTHRKPVQDENKILGTVVGAAL
GGVLGNQFGGGSGKKVATAAGAVAGGYAGNQVQGNMQAGDTYTTTQQRCKTVQDSSTRTLGYDVTYRLAGQEGVIRMEKA
PGATIPVKDGKLVIDSQSQS
>Mature_180_residues
MNKSMLAGVGIGVASALALSAAASGSLFSSKPQFAEVLASNPVTETIKTPRQECRNVTVTHRKPVQDENKILGTVVGAAL
GGVLGNQFGGGSGKKVATAAGAVAGGYAGNQVQGNMQAGDTYTTTQQRCKTVQDSSTRTLGYDVTYRLAGQEGVIRMEKA
PGATIPVKDGKLVIDSQSQS

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Rickettsia 17 kDa surface antigen [H]

Homologues:

Organism=Escherichia coli, GI1787353, Length=178, Percent_Identity=62.3595505617977, Blast_Score=228, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 18403; Mature: 18403

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSMLAGVGIGVASALALSAAASGSLFSSKPQFAEVLASNPVTETIKTPRQECRNVTVT
CCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHCHHHHHCCCEEE
HRKPVQDENKILGTVVGAALGGVLGNQFGGGSGKKVATAAGAVAGGYAGNQVQGNMQAGD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHCHHHCCCCCCEEECCCCCCC
TYTTTQQRCKTVQDSSTRTLGYDVTYRLAGQEGVIRMEKAPGATIPVKDGKLVIDSQSQS
CCCHHHHHHHHHCCCCCEEEECEEEEEECCCCCEEEEECCCCCEEEECCCEEEEECCCCC
>Mature Secondary Structure
MNKSMLAGVGIGVASALALSAAASGSLFSSKPQFAEVLASNPVTETIKTPRQECRNVTVT
CCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHCHHHHHCCCEEE
HRKPVQDENKILGTVVGAALGGVLGNQFGGGSGKKVATAAGAVAGGYAGNQVQGNMQAGD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHCHHHCCCCCCEEECCCCCCC
TYTTTQQRCKTVQDSSTRTLGYDVTYRLAGQEGVIRMEKAPGATIPVKDGKLVIDSQSQS
CCCHHHHHHHHHCCCCCEEEECEEEEEECCCCCEEEEECCCCCEEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]