Click here to switch to the map view.

The map label for this gene is yciU [C]

Identifier: 145299144

GI number: 145299144

Start: 2307746

End: 2308069

Strand: Direct

Name: yciU [C]

Synonym: ASA_2172

Alternate gene names: 145299144

Gene position: 2307746-2308069 (Clockwise)

Preceding gene: 145299143

Following gene: 145299147

Centisome position: 49.08

GC content: 58.02

Gene sequence:

>324_bases
ATGGAACAACGTACCCCGGATCAGCTGGTCGAATGGGCCTATGATCAGTTTCTTGAGCAGGCCGCAGACATGCTGGCCCC
CGAACAAATCGTCGACATCACACTGGAGTTCGAACAGCGTGGCGCCGTCGAGGCGACCCTGCCCAATGGAGACTGGTCAA
CCGAACTCGGTGTACCGGTCGACATGGAGTCCTGGGTCGAGGTGTGGGTTGGCTTGCTGGACCATCAGGATGAGTTTGAG
GTGATCTACGCCACCTTCCTGCTGCCCCGCTTTCTTAACGAGCACGATGTCCATGTGCGCTGGCATCGCCAGCAACAGGC
ATAA

Upstream 100 bases:

>100_bases
CGCGCCGTTGGACAGGTGGCGGATCGGTATCCGCACCGGTCTGGCCGCCACCGCCAATACTTGCTACAGTAGCGAACCTC
GATGTATCTGGAGTGATTTC

Downstream 100 bases:

>100_bases
AAAAGGCGCCCTCGGCGCTTTCTCTTTTCTGGTATGCCCCCGCTCAGGGCTGCGCTGCAATGGCCTTGGCCAGACAGCGG
CGACACCAGCAGGCGCTGGC

Product: dsDNA-mimic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MEQRTPDQLVEWAYDQFLEQAADMLAPEQIVDITLEFEQRGAVEATLPNGDWSTELGVPVDMESWVEVWVGLLDHQDEFE
VIYATFLLPRFLNEHDVHVRWHRQQQA

Sequences:

>Translated_107_residues
MEQRTPDQLVEWAYDQFLEQAADMLAPEQIVDITLEFEQRGAVEATLPNGDWSTELGVPVDMESWVEVWVGLLDHQDEFE
VIYATFLLPRFLNEHDVHVRWHRQQQA
>Mature_107_residues
MEQRTPDQLVEWAYDQFLEQAADMLAPEQIVDITLEFEQRGAVEATLPNGDWSTELGVPVDMESWVEVWVGLLDHQDEFE
VIYATFLLPRFLNEHDVHVRWHRQQQA

Specific function: Unknown

COG id: COG3099

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0263 family [H]

Homologues:

Organism=Escherichia coli, GI87081860, Length=98, Percent_Identity=36.734693877551, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007376
- ProDom:   PD020447 [H]

Pfam domain/function: PF04269 DUF440 [H]

EC number: NA

Molecular weight: Translated: 12595; Mature: 12595

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRTPDQLVEWAYDQFLEQAADMLAPEQIVDITLEFEQRGAVEATLPNGDWSTELGVPV
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCEEEECCCCCCCCCCCCCC
DMESWVEVWVGLLDHQDEFEVIYATFLLPRFLNEHDVHVRWHRQQQA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure
MEQRTPDQLVEWAYDQFLEQAADMLAPEQIVDITLEFEQRGAVEATLPNGDWSTELGVPV
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCEEEECCCCCCCCCCCCCC
DMESWVEVWVGLLDHQDEFEVIYATFLLPRFLNEHDVHVRWHRQQQA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA