Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 145297088

GI number: 145297088

Start: 3308413

End: 3309567

Strand: Reverse

Name: parB [H]

Synonym: cgR_2984

Alternate gene names: 145297088

Gene position: 3309567-3308413 (Counterclockwise)

Preceding gene: 145297089

Following gene: 145297087

Centisome position: 99.86

GC content: 59.13

Gene sequence:

>1155_bases
GTGCGTCTAAGAGCGATGGCTCAGAACAAGGGTTCCGACAAGTCCCAGACGGAAAAGCGTAAGGGCGGTCTGGGGCGCGG
TCTGGCCGCACTTATTCCCTCAGGACCAAGTAATTCCCCAGGTCTTGGTGGCGGTGCGGCTGACATCATTTTGGGCGGTA
CCGTGGGTGCGCGTACTGCTGCAGCTCCCAAGCGTGAGTCCACACCAGCAGCTCCTGCACCTGAGGCTCCTGCGCAGGCC
GCTCCACAACACACTGAGGCCACAAAGCCAGAGGTAGTTCCAGAGCCAGCAGCTCCTGCTCCAACGCAGTCAGCACAGCA
GGAAGCGCCGCAGGCACAGCCAGCACAGCAGTCTGAGTTCGGCGCATCCTACCTTGAGATCCCGATCGAGCAGATCCGTC
CCAACCCGCAGCAGCCTCGCCATGAGTTTGATCCGCAGGCACTTGATGAGTTGGTGCATTCGATCAGCGAGTTCGGCCTC
ATGCAGCCGATCGTGGTGCGCAGGTCCGAGGATGGCTATGAGCTCATCATGGGTGAGCGTCGTTGGCGTGCATCCAAGCG
AGCTGGCCTTGAGGTTATCCCGGCGATTGTCCGTGAAACTGAAGACAGCGCGATGCTGCGCGACGCCCTTTTGGAAAATA
TCCACAGGGTGCAGCTGAATCCTTTGGAAGAGGCAGCCGCTTACCAGCAGTTGCTGGAGGAGTTCGGTGTCACCCAGGCA
GAGCTGGCCGATAAGCTGGGCCGTTCCCGTCCGGTAATCACCAATATGATTCGTCTGCTGGGCCTTCCAGTCAACGTGCA
GACCAAGGTGGCAGCTGGTGTGCTGTCTGCAGGCCATGCACGCGCGTTGCTCGGGCTGAAGGCCGGTGAGGACGCTCAGG
ATACCCTGGCGACCCGAATCATCGCTGAGGGCCTGTCTGTGCGCGCTACGGAGGAATTGGTGCTGCTGCACAACCGTGGT
GATCAGGATGAGGAGAAGAAGCCACGCGAAAAGGCTGCAACTCCTGAGGTCTTTACTCGTGCGGCTGAGTCCTTGGCGGA
TAATTTGGATACCAAGGTCTCGGTGATGATGGGTAAGAAGAAGGGCAAGCTCGTGGTGGAATTCGGCGACAAGGATGATT
TCGAGCGCATCATGTCCTTGATCCAGGGCCAATAA

Upstream 100 bases:

>100_bases
GCGATTACTTGCCTAGCGATGAATCCGGTCCGATCGGCCTAAAACCTGCGAAATAGCAGTAAACTTCTTTGAATACGTTA
ATTGTTGTGCTGTACGAAAG

Downstream 100 bases:

>100_bases
TTTTAAGTTTGGCGCCATGCTCCAGGCTTCCCTTTTCCCGATCGTGCAGGAAAATATAGATTTTCTGCATCCCCAGGCCC
GCAAGTCGGTGTTTTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MRLRAMAQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTAAAPKRESTPAAPAPEAPAQA
APQHTEATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEFGASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGL
MQPIVVRRSEDGYELIMGERRWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQA
ELADKLGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRIIAEGLSVRATEELVLLHNRG
DQDEEKKPREKAATPEVFTRAAESLADNLDTKVSVMMGKKKGKLVVEFGDKDDFERIMSLIQGQ

Sequences:

>Translated_384_residues
MRLRAMAQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTAAAPKRESTPAAPAPEAPAQA
APQHTEATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEFGASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGL
MQPIVVRRSEDGYELIMGERRWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQA
ELADKLGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRIIAEGLSVRATEELVLLHNRG
DQDEEKKPREKAATPEVFTRAAESLADNLDTKVSVMMGKKKGKLVVEFGDKDDFERIMSLIQGQ
>Mature_384_residues
MRLRAMAQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTAAAPKRESTPAAPAPEAPAQA
APQHTEATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEFGASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGL
MQPIVVRRSEDGYELIMGERRWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQA
ELADKLGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRIIAEGLSVRATEELVLLHNRG
DQDEEKKPREKAATPEVFTRAAESLADNLDTKVSVMMGKKKGKLVVEFGDKDDFERIMSLIQGQ

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 41264; Mature: 41264

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRAMAQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTA
CCCHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCC
AAPKRESTPAAPAPEAPAQAAPQHTEATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHH
GASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQPIVVRRSEDGYELIMGER
CCHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCCCCHHHHHCCH
RWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQA
HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
ELADKLGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRI
HHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH
IAEGLSVRATEELVLLHNRGDQDEEKKPREKAATPEVFTRAAESLADNLDTKVSVMMGKK
HHHCCCCCCCCCEEEEECCCCCCHHHCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCC
KGKLVVEFGDKDDFERIMSLIQGQ
CCCEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRLRAMAQNKGSDKSQTEKRKGGLGRGLAALIPSGPSNSPGLGGGAADIILGGTVGARTA
CCCHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCHHHEEECCCCCCCCC
AAPKRESTPAAPAPEAPAQAAPQHTEATKPEVVPEPAAPAPTQSAQQEAPQAQPAQQSEF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHH
GASYLEIPIEQIRPNPQQPRHEFDPQALDELVHSISEFGLMQPIVVRRSEDGYELIMGER
CCHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEECCCCCHHHHHCCH
RWRASKRAGLEVIPAIVRETEDSAMLRDALLENIHRVQLNPLEEAAAYQQLLEEFGVTQA
HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
ELADKLGRSRPVITNMIRLLGLPVNVQTKVAAGVLSAGHARALLGLKAGEDAQDTLATRI
HHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH
IAEGLSVRATEELVLLHNRGDQDEEKKPREKAATPEVFTRAAESLADNLDTKVSVMMGKK
HHHCCCCCCCCCEEEEECCCCCCHHHCCHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCC
KGKLVVEFGDKDDFERIMSLIQGQ
CCCEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]