Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is yvnB [H]

Identifier: 145297054

GI number: 145297054

Start: 3272505

End: 3274067

Strand: Direct

Name: yvnB [H]

Synonym: cgR_2950

Alternate gene names: 145297054

Gene position: 3272505-3274067 (Clockwise)

Preceding gene: 145297053

Following gene: 145297055

Centisome position: 98.74

GC content: 56.88

Gene sequence:

>1563_bases
GTGGACGCCGCAGATGAGCTCGCGGCCGACACTGAAGTGCGCCTGAATTGGGCGGGATCCGCCGATGGTCGCGCGCAAGT
AATCATGTATGTTTTCGATGGTGAATCGTGGATCGAGGTGGATCGCCATCTCACCGGCACTGAAATGGAAGAGTTCGCAC
TGCAGGGCGTGGTCAATGCCGCTGACTACGCAATCGATGGAACCGTCACCGTACTGATTCAGCATTCCGAAGGCTTCGCC
GGGGCGGATTTCACCACTAGAACCTCCTCCGTGGAACCTGCACACCCAGATGATGTTGCTCGCTCCGACTACGATTTCAC
CCTTGTATGGGAGTCCGACACTCAGTACTACAACGAAGAATTCCACGAGCACCAAACCAAGATCCATGACTACGTGCTCG
CCGAACGGGAGAACAAGAACATCCAGTTCATGTTCCACACTGGCGATATTGTCGACGACTGGGATCAGCCCGCACAGTGG
GCCGCAGCCAACCCCGAATACCAGCGCCTCGACGACGCTGGCTTGCCATATTCCGTCCTTGCCGGAAACCACGATGTTGG
CCACACCAGCAATGACTACACCGAATTCAGCCGACACTTCGGCGAACAGCGCTACACAGACAACCCGTGGTACGGCGAAT
CCTACCAAGACAACCGCGGACACTATGACCTGTTCTCTGCAGGCGGCATCGACTTCATCAACGTCGCCATGGGGTGGGGT
CCCGGCGATGAGGAGATCGCTTGGATGAACGAGGTCCTGGCCAAGCATCCCGAGCGTGTGGCGATCCTCAACCTCCACGA
ATTCATGCTCACCACCGGCGGACTTGGCCCAATCCCGCAGCGCATTCTCGACGAGGTTGCAGCCACCAACCCAAATGTCA
GCATGATCATGTCCGGCCACTACCACGACGCATTCCAACGCACCGACTCCTTTGACGACGATGGTGATGGAGTAGATGAC
CGCACCGTCACCTCTATGCTTTTCGATTACCAAGGCCTACCGGAAGGCGGACAGGGATACCTTCGACTCCTCCACTTTGA
TAACCAGGGCCAGAAGATGATGGTGCGCACCTATTCACCATCCCTGGAGGATTACAACTCTGATGAACCCTCACTGTTGG
GGCCTGCAGAAGACCCCAACATGTATCAAGAATTCGAAGTGTCCTACGAGCAGCTCGGCATCAAACCAGAGGCCCGCACC
CTGATCGGCGATTCCTTCAGCGCCGATTTCTTGACCTCCAATGAAATTGGAACAGTCGATGAGGTTCCTTCTGGAACGAT
CGCTTCCGTGAACTGGAAGGACGTAACCGAAGGTCGCCACAGCTGGTATGTTCGCTCCGAGGATCCTTTCGGCGGCGTCG
AGATTTCACCCGTGCAGTCCTTCATTGCCGGGGAAGAGGCTGGCGGGAACGCGCCCGGCACTGGAAGCTCCAGTGGTAGT
TCATCCCACGGATTATGGGGTGCGCTTGCGGGATTCTTTGCCGGAGCGGCAGCCCTGGCTGGAGCTGCGATCGCATTTGT
CCCCGGAATTTGGGACTATGTCACTAACGCATTCAAGCGATAG

Upstream 100 bases:

>100_bases
AAAATGTTGGAGAGGGGAGACGTCGAAAAGCTATCTAGCCTGGATGGGCTGGGCGTGGAAGTTACCTCCGACGCCGCGCT
GCCATAATCAGCTTTTTGAG

Downstream 100 bases:

>100_bases
TCATGGATAGGAAAACGCTCCACACAGTTTAAGTGTGGAGCGTTTTTCAATGTTTCACGTGAAACATTGGGGTTTTACGC
GGGAGTGAAGTGGCTGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNAADYAIDGTVTVLIQHSEGFA
GADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEEFHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQW
AAANPEYQRLDDAGLPYSVLAGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG
PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGHYHDAFQRTDSFDDDGDGVDD
RTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSPSLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEART
LIGDSFSADFLTSNEIGTVDEVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS
SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR

Sequences:

>Translated_520_residues
MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNAADYAIDGTVTVLIQHSEGFA
GADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEEFHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQW
AAANPEYQRLDDAGLPYSVLAGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG
PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGHYHDAFQRTDSFDDDGDGVDD
RTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSPSLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEART
LIGDSFSADFLTSNEIGTVDEVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS
SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR
>Mature_520_residues
MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNAADYAIDGTVTVLIQHSEGFA
GADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEEFHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQW
AAANPEYQRLDDAGLPYSVLAGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG
PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGHYHDAFQRTDSFDDDGDGVDD
RTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSPSLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEART
LIGDSFSADFLTSNEIGTVDEVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS
SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR

Specific function: Unknown

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR011401 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 57420; Mature: 57420

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNA
CCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHH
ADYAIDGTVTVLIQHSEGFAGADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEE
HHEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCHHHHHH
FHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQWAAANPEYQRLDDAGLPYSVL
HHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCCHHHHCCCCCCEEEE
AGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG
ECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCC
PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGH
CCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECC
YHDAFQRTDSFDDDGDGVDDRTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSP
CHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECC
SLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEARTLIGDSFSADFLTSNEIGTVD
CCCCCCCCCCCEECCCCCCCHHHHHHCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCC
EVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS
CCCCCCEEECCCHHHCCCCCEEEEECCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCC
SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAADELAADTEVRLNWAGSADGRAQVIMYVFDGESWIEVDRHLTGTEMEEFALQGVVNA
CCCHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHH
ADYAIDGTVTVLIQHSEGFAGADFTTRTSSVEPAHPDDVARSDYDFTLVWESDTQYYNEE
HHEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEECCCCHHHHHH
FHEHQTKIHDYVLAERENKNIQFMFHTGDIVDDWDQPAQWAAANPEYQRLDDAGLPYSVL
HHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCHHCCCCCCHHHHCCCCCCEEEE
AGNHDVGHTSNDYTEFSRHFGEQRYTDNPWYGESYQDNRGHYDLFSAGGIDFINVAMGWG
ECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCC
PGDEEIAWMNEVLAKHPERVAILNLHEFMLTTGGLGPIPQRILDEVAATNPNVSMIMSGH
CCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECC
YHDAFQRTDSFDDDGDGVDDRTVTSMLFDYQGLPEGGQGYLRLLHFDNQGQKMMVRTYSP
CHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECC
SLEDYNSDEPSLLGPAEDPNMYQEFEVSYEQLGIKPEARTLIGDSFSADFLTSNEIGTVD
CCCCCCCCCCCEECCCCCCCHHHHHHCCHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCC
EVPSGTIASVNWKDVTEGRHSWYVRSEDPFGGVEISPVQSFIAGEEAGGNAPGTGSSSGS
CCCCCCEEECCCHHHCCCCCEEEEECCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCC
SSHGLWGALAGFFAGAAALAGAAIAFVPGIWDYVTNAFKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]