| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yfeH [C]
Identifier: 145297031
GI number: 145297031
Start: 3250201
End: 3251181
Strand: Direct
Name: yfeH [C]
Synonym: cgR_2928
Alternate gene names: 145297031
Gene position: 3250201-3251181 (Clockwise)
Preceding gene: 145297029
Following gene: 145297032
Centisome position: 98.07
GC content: 53.21
Gene sequence:
>981_bases ATGTGCATGCTTGAACGCCTCAAACGCCTAGATCCGCTCATTGTCCTCATTGTGCTGGCTGTCATTGTGGCGATCATCAT TCCAGTTCGCGGGGTTGCTGCGGATTGGTTTGATGTCGCCGTCAAGATTGCCATTGCGCTGCTGTTTTTTCTTTATGGTG CCCGCCTATCCACCCAAGAGGCGCTGAATGGTCTGAAGCACTGGAGGCTTCACCTGACTATTTTGGCGATCACTTTCGGA ATATTCCCACTTATCGGCATTGGGCTCGAGCCGATGACTGCATTTGTGTCGGAAGATATTTATCGGGGAATTTTGTTCCT CACGCTCGTTCCGTCCACCGTGCAGTCATCGGTGGCGTTTACCTCGATCGCTAAAGGCAACGTAGCTGGTGCGATTGTGT CAGCATCGCTCTCCAACCTTGCGGGTGTTTTCCTCACTCCGCTGCTGGTCATGCTCGTCATGTCTGCGGGCGGGGGAGTT CACGTGGATTCCCAGGTCTTCCTCGACATTGCGATTCAGCTTCTGCTGCCGTTTATCCTCGGCCAAGTATGTAGGCGTTG GGTGAAGAATTTTGCGGCCAACAAAGCAACAAAAATCGTGGACCGCGGCTCGATCGCGATGGTCGTGTATTCCGCGTTTT CTGCCGGCATGGTGGCTGGCATTTGGTCCACTGTGAGCGTTCTAGAGATTATCTACCTCATTGTTTTCGCCATTCTGCTG GTGATGGCCATGCTGTGGTTCACGCTGTTCATGGCTACGCGCCTTGGATTTAACCGGGCAGATTCCATCGCTATTCAGTT CTGCGGAACCAAGAAATCCCTGGCCACAGGCCTCCCAATGGCGGCAGTCATCTTCGGTGGCGCCAATATCGGCCTGCTCA TCTTGCCGTTGATGATCTTCCACCAAGTCCAGCTGATGATTTGTGCATGGCTTGCAGCTCGTTATGGTCGTGATGCGCAG GAACAGAAAGCCAATGCCTAA
Upstream 100 bases:
>100_bases GTCTTCTCACAGTACCACCCACAAGCCACAAGCAGGGCATGGAGGTGGGCGTCTAAAGCCAAATTTTTCCCGGTGTTTGA GGCGATTGCACCGTACACTA
Downstream 100 bases:
>100_bases AAGTCCTTAATAGCTAGCCAAGCTGGTCAAGCAATGAAAGTGGTCACCTTCCGGGGGCCACTTTTTTGCATTCTGGGCAG TTCGGGCCGGTGTGAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MCMLERLKRLDPLIVLIVLAVIVAIIIPVRGVAADWFDVAVKIAIALLFFLYGARLSTQEALNGLKHWRLHLTILAITFG IFPLIGIGLEPMTAFVSEDIYRGILFLTLVPSTVQSSVAFTSIAKGNVAGAIVSASLSNLAGVFLTPLLVMLVMSAGGGV HVDSQVFLDIAIQLLLPFILGQVCRRWVKNFAANKATKIVDRGSIAMVVYSAFSAGMVAGIWSTVSVLEIIYLIVFAILL VMAMLWFTLFMATRLGFNRADSIAIQFCGTKKSLATGLPMAAVIFGGANIGLLILPLMIFHQVQLMICAWLAARYGRDAQ EQKANA
Sequences:
>Translated_326_residues MCMLERLKRLDPLIVLIVLAVIVAIIIPVRGVAADWFDVAVKIAIALLFFLYGARLSTQEALNGLKHWRLHLTILAITFG IFPLIGIGLEPMTAFVSEDIYRGILFLTLVPSTVQSSVAFTSIAKGNVAGAIVSASLSNLAGVFLTPLLVMLVMSAGGGV HVDSQVFLDIAIQLLLPFILGQVCRRWVKNFAANKATKIVDRGSIAMVVYSAFSAGMVAGIWSTVSVLEIIYLIVFAILL VMAMLWFTLFMATRLGFNRADSIAIQFCGTKKSLATGLPMAAVIFGGANIGLLILPLMIFHQVQLMICAWLAARYGRDAQ EQKANA >Mature_326_residues MCMLERLKRLDPLIVLIVLAVIVAIIIPVRGVAADWFDVAVKIAIALLFFLYGARLSTQEALNGLKHWRLHLTILAITFG IFPLIGIGLEPMTAFVSEDIYRGILFLTLVPSTVQSSVAFTSIAKGNVAGAIVSASLSNLAGVFLTPLLVMLVMSAGGGV HVDSQVFLDIAIQLLLPFILGQVCRRWVKNFAANKATKIVDRGSIAMVVYSAFSAGMVAGIWSTVSVLEIIYLIVFAILL VMAMLWFTLFMATRLGFNRADSIAIQFCGTKKSLATGLPMAAVIFGGANIGLLILPLMIFHQVQLMICAWLAARYGRDAQ EQKANA
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfeH [H]
Homologues:
Organism=Homo sapiens, GI71725371, Length=340, Percent_Identity=29.7058823529412, Blast_Score=125, Evalue=4e-29, Organism=Escherichia coli, GI1788749, Length=327, Percent_Identity=44.0366972477064, Blast_Score=252, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6323677, Length=343, Percent_Identity=22.4489795918367, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002657 - InterPro: IPR016833 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 35244; Mature: 35244
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCMLERLKRLDPLIVLIVLAVIVAIIIPVRGVAADWFDVAVKIAIALLFFLYGARLSTQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ALNGLKHWRLHLTILAITFGIFPLIGIGLEPMTAFVSEDIYRGILFLTLVPSTVQSSVAF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSIAKGNVAGAIVSASLSNLAGVFLTPLLVMLVMSAGGGVHVDSQVFLDIAIQLLLPFIL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GQVCRRWVKNFAANKATKIVDRGSIAMVVYSAFSAGMVAGIWSTVSVLEIIYLIVFAILL HHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMAMLWFTLFMATRLGFNRADSIAIQFCGTKKSLATGLPMAAVIFGGANIGLLILPLMIF HHHHHHHHHHHHHHHCCCCCCHHEEEECCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH HQVQLMICAWLAARYGRDAQEQKANA HHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MCMLERLKRLDPLIVLIVLAVIVAIIIPVRGVAADWFDVAVKIAIALLFFLYGARLSTQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ALNGLKHWRLHLTILAITFGIFPLIGIGLEPMTAFVSEDIYRGILFLTLVPSTVQSSVAF HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSIAKGNVAGAIVSASLSNLAGVFLTPLLVMLVMSAGGGVHVDSQVFLDIAIQLLLPFIL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH GQVCRRWVKNFAANKATKIVDRGSIAMVVYSAFSAGMVAGIWSTVSVLEIIYLIVFAILL HHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMAMLWFTLFMATRLGFNRADSIAIQFCGTKKSLATGLPMAAVIFGGANIGLLILPLMIF HHHHHHHHHHHHHHHCCCCCCHHEEEECCCHHHHHHCCCHHHHHHCCCCHHHHHHHHHHH HQVQLMICAWLAARYGRDAQEQKANA HHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]