| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is benK [H]
Identifier: 145297013
GI number: 145297013
Start: 3230791
End: 3232092
Strand: Direct
Name: benK [H]
Synonym: cgR_2912
Alternate gene names: 145297013
Gene position: 3230791-3232092 (Clockwise)
Preceding gene: 145297007
Following gene: 145297014
Centisome position: 97.48
GC content: 56.99
Gene sequence:
>1302_bases ATGACAGAGCCAACTCTCGGAGCATCGAATAGCTCCCAAACAATTGAAAACAAAGGCCTCACCATCTTGGGCATCAGCGG CCGACGCTTGGCTGCGGTGCTCATTGGCTGGTTTTTTGTCATTTTCGACGGCTACGACCTCATTGTGTACGGCACCGTCC AATCAGCCTTGGCTAAGGAGTGGAACTTAAGCTCTGCAACGCTGGGCACCATCGGCTCTACCGCGTTCTTTGGCATGGCG ATCGGCGCTGTGTTCATTGGTCGACTGTCAGACCGCGTGGGCCGAAAAGCAGCGGTGATTGGATCCGTGCTGATTCTCTC TGTCTTCACCATGCTGTGTGCATTTGCTCCAAACCCATGGGTGTTCGGCGCTTTCCGTTTCATCGCAGGCCTTGGTCTGG GCGGCTTGGTGCCTTCAGTTAATGCGATGACCTCTGATCTGGTTCCACGTAAGACCATGTCAGCGTGGGCAACTGTCATG ATGTCTGGCGTTCCCATTGGTGGTTCCATCGCGGCTGTGCTGGCTCTTGCTGTTGTTCCTTCCTCAGAGGAGTGGGGCTG GCGCTTCATGTTCCTCATCGCGTTGATCCCACTGGTTGTCGGCCTGCCGATCGCCATGAAGGTCATTCCTTCCGATAAGG CCATCAAGGCGGATCACGAAATCCGAGAAGGCCACGATGAGCCAGCAGGTTTCAAGGATCTACTTGTCGATCGCTACCGC TGGATCTCCATTTGGTTCGCGCTCGCCACATTTGTCACCCTGCTCGCGTGGTACGGCCTAGGCACATGGTTGCCTCGCCT CATGGAAACTGCAGGCTATGAGTTCGGCCATGCATTGATGTTCACCCTGGCTCTGAACCTCGGTGCAGTGATCGGATCCG TGGTTACTGCGTGGGCCGGCGATCGTTTCGGGCCAATCCGTTCCGGTGTCATCGCTGCAGGTATCGCCGGTATTGCACTG CTCCTGCTGCTCACTTACCCGCCTGTCACCGCAGTTTATGTCATTCTCATTTTGGCTGGCGTGGGCACCCACGGCACTCA GATCCTCATCATTGCAGCTGTCGCCAACTTCTACCCAAGCAACTTGCGTGGCACGGCACTGGGCTGGGCGTTAGGTGTGG GCCGCATCGGTGCGGTTGTGGCCCCGCAGCTCGCTGGTCTGCTGCTCGCATGGAACTTGGGCGTGAACTCCAACTTCATC ATGTTCGGCGCCGCTGCGTTGCTCTCTGCGCTGGCTCTCAGCGTGTTGCTGCGCCTGCAAAAAACCTACAGCGTCACCCA CAAAGTCGAAATCCAAGGCTAA
Upstream 100 bases:
>100_bases CATAATCACTCTTTCCAGATAGCGGAATACCTTTGATTGTAACTTGTCTCACCTCGATTATGTGTTTATGACATCACACG CACCAGAATCGGGAGGACTT
Downstream 100 bases:
>100_bases ACCCCCTTTTTCAACTCACAGTTAGGAAACTTCACCCATGTCTCTTCCACATTCTGATGAACTCCGCGGCCAAAAGATCA TTATTTCCGGTGGCGGAATT
Product: hypothetical protein
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTEPTLGASNSSQTIENKGLTILGISGRRLAAVLIGWFFVIFDGYDLIVYGTVQSALAKEWNLSSATLGTIGSTAFFGMA IGAVFIGRLSDRVGRKAAVIGSVLILSVFTMLCAFAPNPWVFGAFRFIAGLGLGGLVPSVNAMTSDLVPRKTMSAWATVM MSGVPIGGSIAAVLALAVVPSSEEWGWRFMFLIALIPLVVGLPIAMKVIPSDKAIKADHEIREGHDEPAGFKDLLVDRYR WISIWFALATFVTLLAWYGLGTWLPRLMETAGYEFGHALMFTLALNLGAVIGSVVTAWAGDRFGPIRSGVIAAGIAGIAL LLLLTYPPVTAVYVILILAGVGTHGTQILIIAAVANFYPSNLRGTALGWALGVGRIGAVVAPQLAGLLLAWNLGVNSNFI MFGAAALLSALALSVLLRLQKTYSVTHKVEIQG
Sequences:
>Translated_433_residues MTEPTLGASNSSQTIENKGLTILGISGRRLAAVLIGWFFVIFDGYDLIVYGTVQSALAKEWNLSSATLGTIGSTAFFGMA IGAVFIGRLSDRVGRKAAVIGSVLILSVFTMLCAFAPNPWVFGAFRFIAGLGLGGLVPSVNAMTSDLVPRKTMSAWATVM MSGVPIGGSIAAVLALAVVPSSEEWGWRFMFLIALIPLVVGLPIAMKVIPSDKAIKADHEIREGHDEPAGFKDLLVDRYR WISIWFALATFVTLLAWYGLGTWLPRLMETAGYEFGHALMFTLALNLGAVIGSVVTAWAGDRFGPIRSGVIAAGIAGIAL LLLLTYPPVTAVYVILILAGVGTHGTQILIIAAVANFYPSNLRGTALGWALGVGRIGAVVAPQLAGLLLAWNLGVNSNFI MFGAAALLSALALSVLLRLQKTYSVTHKVEIQG >Mature_432_residues TEPTLGASNSSQTIENKGLTILGISGRRLAAVLIGWFFVIFDGYDLIVYGTVQSALAKEWNLSSATLGTIGSTAFFGMAI GAVFIGRLSDRVGRKAAVIGSVLILSVFTMLCAFAPNPWVFGAFRFIAGLGLGGLVPSVNAMTSDLVPRKTMSAWATVMM SGVPIGGSIAAVLALAVVPSSEEWGWRFMFLIALIPLVVGLPIAMKVIPSDKAIKADHEIREGHDEPAGFKDLLVDRYRW ISIWFALATFVTLLAWYGLGTWLPRLMETAGYEFGHALMFTLALNLGAVIGSVVTAWAGDRFGPIRSGVIAAGIAGIALL LLLTYPPVTAVYVILILAGVGTHGTQILIIAAVANFYPSNLRGTALGWALGVGRIGAVVAPQLAGLLLAWNLGVNSNFIM FGAAALLSALALSVLLRLQKTYSVTHKVEIQG
Specific function: Probable uptake of benzoate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=419, Percent_Identity=23.8663484486874, Blast_Score=87, Evalue=3e-17, Organism=Escherichia coli, GI87081723, Length=372, Percent_Identity=29.8387096774194, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI87082404, Length=405, Percent_Identity=23.7037037037037, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI87082231, Length=183, Percent_Identity=27.8688524590164, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790550, Length=392, Percent_Identity=24.234693877551, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082159, Length=392, Percent_Identity=24.7448979591837, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1788074, Length=386, Percent_Identity=23.8341968911917, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI32564663, Length=467, Percent_Identity=22.6980728051392, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922874, Length=400, Percent_Identity=23, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45737; Mature: 45605
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPTLGASNSSQTIENKGLTILGISGRRLAAVLIGWFFVIFDGYDLIVYGTVQSALAKE CCCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHH WNLSSATLGTIGSTAFFGMAIGAVFIGRLSDRVGRKAAVIGSVLILSVFTMLCAFAPNPW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCH VFGAFRFIAGLGLGGLVPSVNAMTSDLVPRKTMSAWATVMMSGVPIGGSIAAVLALAVVP HHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC SSEEWGWRFMFLIALIPLVVGLPIAMKVIPSDKAIKADHEIREGHDEPAGFKDLLVDRYR CCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHH WISIWFALATFVTLLAWYGLGTWLPRLMETAGYEFGHALMFTLALNLGAVIGSVVTAWAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DRFGPIRSGVIAAGIAGIALLLLLTYPPVTAVYVILILAGVGTHGTQILIIAAVANFYPS CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCC NLRGTALGWALGVGRIGAVVAPQLAGLLLAWNLGVNSNFIMFGAAALLSALALSVLLRLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH KTYSVTHKVEIQG HHHCCEEEEEECC >Mature Secondary Structure TEPTLGASNSSQTIENKGLTILGISGRRLAAVLIGWFFVIFDGYDLIVYGTVQSALAKE CCCCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHH WNLSSATLGTIGSTAFFGMAIGAVFIGRLSDRVGRKAAVIGSVLILSVFTMLCAFAPNPW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCH VFGAFRFIAGLGLGGLVPSVNAMTSDLVPRKTMSAWATVMMSGVPIGGSIAAVLALAVVP HHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC SSEEWGWRFMFLIALIPLVVGLPIAMKVIPSDKAIKADHEIREGHDEPAGFKDLLVDRYR CCCCCCHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHH WISIWFALATFVTLLAWYGLGTWLPRLMETAGYEFGHALMFTLALNLGAVIGSVVTAWAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC DRFGPIRSGVIAAGIAGIALLLLLTYPPVTAVYVILILAGVGTHGTQILIIAAVANFYPS CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCC NLRGTALGWALGVGRIGAVVAPQLAGLLLAWNLGVNSNFIMFGAAALLSALALSVLLRLQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH KTYSVTHKVEIQG HHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9294456 [H]