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The map label for this gene is ycdI [C]

Identifier: 145297004

GI number: 145297004

Start: 3220998

End: 3221609

Strand: Direct

Name: ycdI [C]

Synonym: cgR_2903

Alternate gene names: 145297004

Gene position: 3220998-3221609 (Clockwise)

Preceding gene: 145297000

Following gene: 145297005

Centisome position: 97.19

GC content: 55.72

Gene sequence:

>612_bases
ATGACTACAGTTACTCAAGACCTTCTAGCGCTAGTCGAAGACGCACAGAACCTCCTTTTTCGTGAGGCCCGTACCGCAAA
TGCTTTCACCGATGAACCTGTCTCTGATGAGCAGATTGAAGCTATCTTCGACCTAGTCAAGTGGGCACCAACTTCTATGA
ACTCCCAGCCTCTGCGCGTGGTAATTGTTCGTTCCGAAGAAGCCAAAGCTCGCCTCGTGCCATTGATGGCAGAAGGCAAC
CAGGCCAAGGTTGCTGCAGCTCCTGCAGTTGCACTCCTTGCCGCCGATATCGACTTCCACGAAGAAATGCCAAAGCTTTT
CCCACCTTTCCCAGGCGCACGCGACATGTTCGATGCTGACGAGGCTTCACGCGCTTCCTCCGCAGAACTCAATGCTGGCC
TTCAGATCGGATACGCCATCATCGGTATCCGCGCAGCAGGTCTCGCCGCTGGCCCAATGACCGGCATGGATGCAGACGCT
ATCTCCAAGGAGTTCTTCCCAGACGGCCGCCACCGCGTTCTGGTTGCCATCAACATGGGTAAGCCAGCTGACAATGCTTG
GTACGACCGCCTGCCACGCCTTGAGCAGGACGAAGTTGTCGAGACCCTCTAG

Upstream 100 bases:

>100_bases
GTGCACTATTTCGATTTTGCACAGTGTTGGCGCAAAGTAATCCACCATACAATTACTTGATATGGGAACTAATTTGGGAG
CATTCACCGTTATAAGAAGT

Downstream 100 bases:

>100_bases
AAACCACTCTAGAAATAGCTTTAGAAAGACTTAAATAGATGCCCCGGCTAGTTACATACTGGCCGGGGCGTTTTCCATTT
ACACATCTGTTCGACTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTTVTQDLLALVEDAQNLLFREARTANAFTDEPVSDEQIEAIFDLVKWAPTSMNSQPLRVVIVRSEEAKARLVPLMAEGN
QAKVAAAPAVALLAADIDFHEEMPKLFPPFPGARDMFDADEASRASSAELNAGLQIGYAIIGIRAAGLAAGPMTGMDADA
ISKEFFPDGRHRVLVAINMGKPADNAWYDRLPRLEQDEVVETL

Sequences:

>Translated_203_residues
MTTVTQDLLALVEDAQNLLFREARTANAFTDEPVSDEQIEAIFDLVKWAPTSMNSQPLRVVIVRSEEAKARLVPLMAEGN
QAKVAAAPAVALLAADIDFHEEMPKLFPPFPGARDMFDADEASRASSAELNAGLQIGYAIIGIRAAGLAAGPMTGMDADA
ISKEFFPDGRHRVLVAINMGKPADNAWYDRLPRLEQDEVVETL
>Mature_202_residues
TTVTQDLLALVEDAQNLLFREARTANAFTDEPVSDEQIEAIFDLVKWAPTSMNSQPLRVVIVRSEEAKARLVPLMAEGNQ
AKVAAAPAVALLAADIDFHEEMPKLFPPFPGARDMFDADEASRASSAELNAGLQIGYAIIGIRAAGLAAGPMTGMDADAI
SKEFFPDGRHRVLVAINMGKPADNAWYDRLPRLEQDEVVETL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family. HadB/RutE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787243, Length=194, Percent_Identity=38.1443298969072, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 22036; Mature: 21905

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVTQDLLALVEDAQNLLFREARTANAFTDEPVSDEQIEAIFDLVKWAPTSMNSQPLRV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE
VIVRSEEAKARLVPLMAEGNQAKVAAAPAVALLAADIDFHEEMPKLFPPFPGARDMFDAD
EEEECCCCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCH
EASRASSAELNAGLQIGYAIIGIRAAGLAAGPMTGMDADAISKEFFPDGRHRVLVAINMG
HHHCCCCHHHCCCCEEHHHEEEHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECC
KPADNAWYDRLPRLEQDEVVETL
CCCCCHHHHHCCCCCHHHHHHCC
>Mature Secondary Structure 
TTVTQDLLALVEDAQNLLFREARTANAFTDEPVSDEQIEAIFDLVKWAPTSMNSQPLRV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE
VIVRSEEAKARLVPLMAEGNQAKVAAAPAVALLAADIDFHEEMPKLFPPFPGARDMFDAD
EEEECCCCCCEEEEEEECCCCCEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCH
EASRASSAELNAGLQIGYAIIGIRAAGLAAGPMTGMDADAISKEFFPDGRHRVLVAINMG
HHHCCCCHHHCCCCEEHHHEEEHHHHCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECC
KPADNAWYDRLPRLEQDEVVETL
CCCCCHHHHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA