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The map label for this gene is ywmD [H]

Identifier: 145297003

GI number: 145297003

Start: 3219755

End: 3220447

Strand: Reverse

Name: ywmD [H]

Synonym: cgR_2902

Alternate gene names: 145297003

Gene position: 3220447-3219755 (Counterclockwise)

Preceding gene: 145297006

Following gene: 145297002

Centisome position: 97.17

GC content: 53.54

Gene sequence:

>693_bases
ATGCTGGTGTTGGATAGCTCGGGATCGATGGTGACTCCAGATGCTGGTGGGCAGAGCAGATCAGATGCCGCCAATCAATT
TATTGACGAGCTTGCTGGAACCTTCGATTTAGGGTTGGTGACCTATGGCGGAAACACGGGTGAAACACCGGAAGATTATG
AAGCCGGCTGCCAGGACATCACCGTCGTGCGCGGACCAACCAATGGGCAGGCTGAGCAGCTTAAACAACACATTGATGGC
CTCCAACCACGGGGTTATACGCCGATTGGTGAATCCCTGCGCAAGGCTGTAGCAGAATTGCCGGAAGGTGGATCTGGCAC
CATCCTGTTGGTCTCTGATGGCATCGCAACGTGCACTCCCCCTCCTGTATGCGAGGTTGCTGCAGAATTGGCTGACCAGG
GCGTTGATCTGGTGATTAACACTGTTGGATTCACTCTCGATGAGTCTGCTCGTGCGGTACTGGAGTGCATTGCGCAGGCT
GGAAACGGTACTTATGCAGATGCGAGCGATGCGGATTCGCTTGTGGCAGAACTGAAGCAAGCAGCCACCCGCACTGCAGT
GGGCTATGAATCAGACCTGGAACAAATCGATGGCAACAGCAGTCAAACAAGCCCAACCCCGATTTCAGATGATGTGGAAC
TGTTCAAAGCCGATCTTCCAGCGCTGGATAATAAAGACGGCGAAGTAACTTAG

Upstream 100 bases:

>100_bases
GATATTTCTTGCCGTAATAACAAGTATTCTTCTCATAGTTTTAAGCGTGCCCTCCACCGCGAATGCACAAACAGAATCTA
CATCCCGCGGAGTCCCCACC

Downstream 100 bases:

>100_bases
TACTGGTCCATCCCTGTTGAAGATTATGAACGTGTGCAGGTAACCACCTCGTATGTTGCACCAGTGACGGTGGGGCATAG
CAATGAGTATTTAAGTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MLVLDSSGSMVTPDAGGQSRSDAANQFIDELAGTFDLGLVTYGGNTGETPEDYEAGCQDITVVRGPTNGQAEQLKQHIDG
LQPRGYTPIGESLRKAVAELPEGGSGTILLVSDGIATCTPPPVCEVAAELADQGVDLVINTVGFTLDESARAVLECIAQA
GNGTYADASDADSLVAELKQAATRTAVGYESDLEQIDGNSSQTSPTPISDDVELFKADLPALDNKDGEVT

Sequences:

>Translated_230_residues
MLVLDSSGSMVTPDAGGQSRSDAANQFIDELAGTFDLGLVTYGGNTGETPEDYEAGCQDITVVRGPTNGQAEQLKQHIDG
LQPRGYTPIGESLRKAVAELPEGGSGTILLVSDGIATCTPPPVCEVAAELADQGVDLVINTVGFTLDESARAVLECIAQA
GNGTYADASDADSLVAELKQAATRTAVGYESDLEQIDGNSSQTSPTPISDDVELFKADLPALDNKDGEVT
>Mature_230_residues
MLVLDSSGSMVTPDAGGQSRSDAANQFIDELAGTFDLGLVTYGGNTGETPEDYEAGCQDITVVRGPTNGQAEQLKQHIDG
LQPRGYTPIGESLRKAVAELPEGGSGTILLVSDGIATCTPPPVCEVAAELADQGVDLVINTVGFTLDESARAVLECIAQA
GNGTYADASDADSLVAELKQAATRTAVGYESDLEQIDGNSSQTSPTPISDDVELFKADLPALDNKDGEVT

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 23752; Mature: 23752

Theoretical pI: Translated: 3.65; Mature: 3.65

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLDSSGSMVTPDAGGQSRSDAANQFIDELAGTFDLGLVTYGGNTGETPEDYEAGCQDI
CEEECCCCCEECCCCCCCCHHHHHHHHHHHHHCHHHCEEEEECCCCCCCCHHHHCCCCEE
TVVRGPTNGQAEQLKQHIDGLQPRGYTPIGESLRKAVAELPEGGSGTILLVSDGIATCTP
EEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
PPVCEVAAELADQGVDLVINTVGFTLDESARAVLECIAQAGNGTYADASDADSLVAELKQ
CHHHHHHHHHHHCCCEEEEHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
AATRTAVGYESDLEQIDGNSSQTSPTPISDDVELFKADLPALDNKDGEVT
HHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLVLDSSGSMVTPDAGGQSRSDAANQFIDELAGTFDLGLVTYGGNTGETPEDYEAGCQDI
CEEECCCCCEECCCCCCCCHHHHHHHHHHHHHCHHHCEEEEECCCCCCCCHHHHCCCCEE
TVVRGPTNGQAEQLKQHIDGLQPRGYTPIGESLRKAVAELPEGGSGTILLVSDGIATCTP
EEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
PPVCEVAAELADQGVDLVINTVGFTLDESARAVLECIAQAGNGTYADASDADSLVAELKQ
CHHHHHHHHHHHCCCEEEEHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
AATRTAVGYESDLEQIDGNSSQTSPTPISDDVELFKADLPALDNKDGEVT
HHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]