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The map label for this gene is yxaD [H]

Identifier: 145296943

GI number: 145296943

Start: 3155637

End: 3156095

Strand: Direct

Name: yxaD [H]

Synonym: cgR_2843

Alternate gene names: 145296943

Gene position: 3155637-3156095 (Clockwise)

Preceding gene: 145296940

Following gene: 145296946

Centisome position: 95.22

GC content: 54.68

Gene sequence:

>459_bases
ATGAGCACCGACCCCATCGCGGCCTTGGAATACGAATCCATCATCTTCGCCCGTCACCGGAATCAATACACCGGCCAAGC
AGGTACGAATGCTGGCGTCCTCGATTCCAGCGGCTACAACCTACTCACGCTGCTCCAGTTACGTGGCCCCTCCACCATCG
GTGAACTCAGCGCCATCACCGGCCTAGACGCATCTACCCTTAACCGTCAGACAAAAGCCCTACTAACCAAAGGATTTGTC
GAACGCATCCCAGATCCCGACGGTGGAATCGCTCGGAAATTCCACCCCACCGACCTCGGCAATGAACTGCTCAACGAGGA
ACGCACATCCAGCCAAGAAAAATATGCCGAGTTACTTTCAGACTGGCCCGAAGAGGATCTACGCACCTTCGTCAAACTTC
TTGAAAAACTAAATAAAGCCGTGGAGACACGCGTCGGAAAGCATTGGCCGCGCCCCTAA

Upstream 100 bases:

>100_bases
GTATTTGATCTGTGGTGTGGCTGATTCGGGAGGGCTCGATGACATTATGTGTATGGTACATATTTTGTGCATGATGCAAT
AGCTGGCAAACTGGAGAGCC

Downstream 100 bases:

>100_bases
CTCAGCCCAAGCCAGAGCCCGTGCTTCTGCTAAAGCTCCGAGATGCTCCCGTAGGCCAACCCCGGCGCGGATACCTAAAG
CCTTGCAGCAACCCCCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSTDPIAALEYESIIFARHRNQYTGQAGTNAGVLDSSGYNLLTLLQLRGPSTIGELSAITGLDASTLNRQTKALLTKGFV
ERIPDPDGGIARKFHPTDLGNELLNEERTSSQEKYAELLSDWPEEDLRTFVKLLEKLNKAVETRVGKHWPRP

Sequences:

>Translated_152_residues
MSTDPIAALEYESIIFARHRNQYTGQAGTNAGVLDSSGYNLLTLLQLRGPSTIGELSAITGLDASTLNRQTKALLTKGFV
ERIPDPDGGIARKFHPTDLGNELLNEERTSSQEKYAELLSDWPEEDLRTFVKLLEKLNKAVETRVGKHWPRP
>Mature_151_residues
STDPIAALEYESIIFARHRNQYTGQAGTNAGVLDSSGYNLLTLLQLRGPSTIGELSAITGLDASTLNRQTKALLTKGFVE
RIPDPDGGIARKFHPTDLGNELLNEERTSSQEKYAELLSDWPEEDLRTFVKLLEKLNKAVETRVGKHWPRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16893; Mature: 16762

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDPIAALEYESIIFARHRNQYTGQAGTNAGVLDSSGYNLLTLLQLRGPSTIGELSAIT
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
GLDASTLNRQTKALLTKGFVERIPDPDGGIARKFHPTDLGNELLNEERTSSQEKYAELLS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
DWPEEDLRTFVKLLEKLNKAVETRVGKHWPRP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
STDPIAALEYESIIFARHRNQYTGQAGTNAGVLDSSGYNLLTLLQLRGPSTIGELSAIT
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
GLDASTLNRQTKALLTKGFVERIPDPDGGIARKFHPTDLGNELLNEERTSSQEKYAELLS
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
DWPEEDLRTFVKLLEKLNKAVETRVGKHWPRP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]