| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is fabG3 [H]
Identifier: 145296941
GI number: 145296941
Start: 3153802
End: 3154539
Strand: Reverse
Name: fabG3 [H]
Synonym: cgR_2841
Alternate gene names: 145296941
Gene position: 3154539-3153802 (Counterclockwise)
Preceding gene: 145296942
Following gene: 145296938
Centisome position: 95.18
GC content: 65.45
Gene sequence:
>738_bases ATGAATCGCAGTGATCGCGCAGCTGTCGCTCTTGTGACGGGTGCGGGGCGGGGAATCGGAGCGGCGATCGCGCGGGCGCT GTCCGATCTCGATTATGTGGTTGTCGTTACAGACGCGGTCGAGCGTCGTGCAGAGTCCGTGGCATCTTCCCTCGGCGCTG ACTCTGCGATTCTCGACGTCACCGACGAACGCCAGTGGAAGGCCGTCGTTGCTGCGACCGAGAGACGCCACGGCGGCGTG GACGTCCTCGTGAACAACGCCGGAGTCGGGTTCGCCGCGGCACTGGATCGCACGTCACGTGAGAAGTGGGACGGTGTGCT GGCCACGAACCTCACGGGTCCGTTTCTCGGGTGCAAGACGGTCGCTCCTGTCATGAAGCGCGGTGGCGGTGGGGTGATCG TCAACGTGTCATCCATCGACGCCATTCGCGGACGAGAGGGTCTGCACGCCTATGCGGCATCCAAAGCGGGTTTGCGCGGT CTGGGTCAGTCGCTCGCGGTTGAGTTGGCAGCAGACGGCATCCGCGTCAACACGGTTCTGCCAGGGCTCGTGCCGACGTC GATGACATCGCGTGTGGATCCCGGTTCCTTCGACATCCCGCTTGGTCGTGCGGCGCAACCGGACGAGATCGCGCAGGTCG TCGCGTTCCTCGCGTCGACGGGCGCGAGCTACGTCGCCGGCGCAGAAGTTGTCGTCGACGGGGCTTTGACAGCGCGGATC GCCAGACGCGACGGCTGA
Upstream 100 bases:
>100_bases TGGGCGTTGGGCCTCGGCGAAAGCCCTGCGTGCGGCATCGCGGGCTTGGCCGCCGTGACGGTTGTTCTGCTATCATGGCT GCGTGATGGAGACCTCGCCG
Downstream 100 bases:
>100_bases CGCAGAGGGTTGCGCGCCGCCACTTCCGAGGCAATGACATTCGACACTACAGAGCGGTCTTGATCCAGATCAGCGTGGCG GCGAGGTTGACGGCGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNRSDRAAVALVTGAGRGIGAAIARALSDLDYVVVVTDAVERRAESVASSLGADSAILDVTDERQWKAVVAATERRHGGV DVLVNNAGVGFAAALDRTSREKWDGVLATNLTGPFLGCKTVAPVMKRGGGGVIVNVSSIDAIRGREGLHAYAASKAGLRG LGQSLAVELAADGIRVNTVLPGLVPTSMTSRVDPGSFDIPLGRAAQPDEIAQVVAFLASTGASYVAGAEVVVDGALTARI ARRDG
Sequences:
>Translated_245_residues MNRSDRAAVALVTGAGRGIGAAIARALSDLDYVVVVTDAVERRAESVASSLGADSAILDVTDERQWKAVVAATERRHGGV DVLVNNAGVGFAAALDRTSREKWDGVLATNLTGPFLGCKTVAPVMKRGGGGVIVNVSSIDAIRGREGLHAYAASKAGLRG LGQSLAVELAADGIRVNTVLPGLVPTSMTSRVDPGSFDIPLGRAAQPDEIAQVVAFLASTGASYVAGAEVVVDGALTARI ARRDG >Mature_245_residues MNRSDRAAVALVTGAGRGIGAAIARALSDLDYVVVVTDAVERRAESVASSLGADSAILDVTDERQWKAVVAATERRHGGV DVLVNNAGVGFAAALDRTSREKWDGVLATNLTGPFLGCKTVAPVMKRGGGGVIVNVSSIDAIRGREGLHAYAASKAGLRG LGQSLAVELAADGIRVNTVLPGLVPTSMTSRVDPGSFDIPLGRAAQPDEIAQVVAFLASTGASYVAGAEVVVDGALTARI ARRDG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=256, Percent_Identity=37.5, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI40254992, Length=232, Percent_Identity=38.3620689655172, Blast_Score=128, Evalue=6e-30, Organism=Homo sapiens, GI19923817, Length=248, Percent_Identity=34.2741935483871, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI15277342, Length=250, Percent_Identity=36.4, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=31.3953488372093, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=34.5679012345679, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI126723191, Length=177, Percent_Identity=39.5480225988701, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI66933014, Length=213, Percent_Identity=30.5164319248826, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI59889578, Length=214, Percent_Identity=32.2429906542056, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI4758504, Length=254, Percent_Identity=31.496062992126, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI33667109, Length=205, Percent_Identity=34.6341463414634, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI302344755, Length=106, Percent_Identity=44.3396226415094, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI7705925, Length=240, Percent_Identity=32.9166666666667, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI4504505, Length=223, Percent_Identity=33.1838565022422, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI4503301, Length=208, Percent_Identity=29.3269230769231, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=31.3253012048193, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI31542939, Length=202, Percent_Identity=30.6930693069307, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI83715985, Length=251, Percent_Identity=31.0756972111554, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI7657478, Length=191, Percent_Identity=32.9842931937173, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI142976729, Length=216, Percent_Identity=27.7777777777778, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=28.3333333333333, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=28.9473684210526, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI223718074, Length=193, Percent_Identity=33.160621761658, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4502601, Length=231, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI7706318, Length=190, Percent_Identity=32.6315789473684, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4502599, Length=231, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI20149619, Length=226, Percent_Identity=27.8761061946903, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI226371731, Length=198, Percent_Identity=29.7979797979798, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=235, Percent_Identity=38.7234042553192, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI2367175, Length=240, Percent_Identity=39.1666666666667, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI1790717, Length=238, Percent_Identity=31.0924369747899, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=35.1020408163265, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI87082100, Length=247, Percent_Identity=34.8178137651822, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=32.0987654320988, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=30.3643724696356, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=30.8641975308642, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI2367365, Length=235, Percent_Identity=33.6170212765957, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789378, Length=237, Percent_Identity=32.9113924050633, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1787905, Length=237, Percent_Identity=32.0675105485232, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789057, Length=251, Percent_Identity=30.2788844621514, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787820, Length=224, Percent_Identity=27.2321428571429, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786701, Length=241, Percent_Identity=28.2157676348548, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17555706, Length=239, Percent_Identity=36.4016736401674, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=6e-27, Organism=Caenorhabditis elegans, GI25147288, Length=240, Percent_Identity=36.25, Blast_Score=113, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17560676, Length=250, Percent_Identity=33.6, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17538182, Length=252, Percent_Identity=30.952380952381, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17562904, Length=252, Percent_Identity=32.1428571428571, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=31.2741312741313, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=32.2448979591837, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=30.4182509505703, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562910, Length=257, Percent_Identity=32.6848249027237, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17538480, Length=255, Percent_Identity=30.1960784313725, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17560332, Length=255, Percent_Identity=32.5490196078431, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=32.8185328185328, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17565030, Length=260, Percent_Identity=30.7692307692308, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=30.8943089430894, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=29.8850574712644, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17560150, Length=254, Percent_Identity=29.1338582677165, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=28.0487804878049, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=30.7984790874525, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17562908, Length=258, Percent_Identity=32.5581395348837, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17536651, Length=251, Percent_Identity=28.6852589641434, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17538486, Length=255, Percent_Identity=29.4117647058824, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=30.7086614173228, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561272, Length=235, Percent_Identity=28.936170212766, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=28.6274509803922, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560220, Length=258, Percent_Identity=31.7829457364341, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17564282, Length=186, Percent_Identity=29.5698924731183, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17568967, Length=239, Percent_Identity=30.1255230125523, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17562990, Length=254, Percent_Identity=28.740157480315, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72000259, Length=279, Percent_Identity=29.3906810035842, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17531453, Length=258, Percent_Identity=32.1705426356589, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71982365, Length=187, Percent_Identity=31.5508021390374, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=25.6809338521401, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212645366, Length=99, Percent_Identity=40.4040404040404, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203115, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203117, Length=185, Percent_Identity=29.1891891891892, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=229, Percent_Identity=30.1310043668122, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6322227, Length=195, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324126, Length=247, Percent_Identity=28.3400809716599, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=33.984375, Blast_Score=124, Evalue=6e-29, Organism=Drosophila melanogaster, GI24639444, Length=240, Percent_Identity=37.9166666666667, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI28571526, Length=256, Percent_Identity=33.59375, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=37.0967741935484, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=32.6693227091633, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=31.8367346938775, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI24643142, Length=235, Percent_Identity=33.1914893617021, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI18859837, Length=235, Percent_Identity=31.4893617021277, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=30.952380952381, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24644337, Length=173, Percent_Identity=36.4161849710983, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI28571387, Length=228, Percent_Identity=31.5789473684211, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357673, Length=185, Percent_Identity=30.2702702702703, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24584748, Length=191, Percent_Identity=30.8900523560209, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI161076933, Length=191, Percent_Identity=30.8900523560209, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24584744, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574402, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24648693, Length=229, Percent_Identity=31.0043668122271, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355889, Length=229, Percent_Identity=31.0043668122271, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24581726, Length=199, Percent_Identity=29.1457286432161, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.53 [H]
Molecular weight: Translated: 25000; Mature: 25000
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSDRAAVALVTGAGRGIGAAIARALSDLDYVVVVTDAVERRAESVASSLGADSAILDV CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEC TDERQWKAVVAATERRHGGVDVLVNNAGVGFAAALDRTSREKWDGVLATNLTGPFLGCKT CCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHH VAPVMKRGGGGVIVNVSSIDAIRGREGLHAYAASKAGLRGLGQSLAVELAADGIRVNTVL HHHHHHCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEC PGLVPTSMTSRVDPGSFDIPLGRAAQPDEIAQVVAFLASTGASYVAGAEVVVDGALTARI CCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCEEECCHHHHHH ARRDG HHCCC >Mature Secondary Structure MNRSDRAAVALVTGAGRGIGAAIARALSDLDYVVVVTDAVERRAESVASSLGADSAILDV CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCCEEEEC TDERQWKAVVAATERRHGGVDVLVNNAGVGFAAALDRTSREKWDGVLATNLTGPFLGCKT CCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHH VAPVMKRGGGGVIVNVSSIDAIRGREGLHAYAASKAGLRGLGQSLAVELAADGIRVNTVL HHHHHHCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEC PGLVPTSMTSRVDPGSFDIPLGRAAQPDEIAQVVAFLASTGASYVAGAEVVVDGALTARI CCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCEEECCHHHHHH ARRDG HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]