| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yxeP [H]
Identifier: 145296929
GI number: 145296929
Start: 3142708
End: 3143931
Strand: Reverse
Name: yxeP [H]
Synonym: cgR_2829
Alternate gene names: 145296929
Gene position: 3143931-3142708 (Counterclockwise)
Preceding gene: 145296930
Following gene: 145296928
Centisome position: 94.86
GC content: 54.66
Gene sequence:
>1224_bases ATGACTATCTCCGCGATCCTTTCCGACCTGGACAACACGCGTAGCTACCGCGAAGAGTTGTACAAGTTCTTCCATCAGCA CCCGGAGTTGTCTTTGCAAGAGTTCGAGACATCCAAACGGATTATTTCCGAACTGGAATCCTATGGTGTGGAATCCATCC AGCGCATTGGTGGCACCGGTGTTGTTGCGGTGATCAGCAATGGGGATGGGCCGGTTGTTGCGCTTCGTGGCGATATTGAT GCGCTGCCCATGGCGGAGCGATCCGGCAAAGAATATGCAGCAACCGGTGCGACGCAGGTGGATAACAACACAGGTCAAGA AACTCCGGTGGCGCATACATGCGGTCATGATGTGCACATTTCTTCGCTCTTGGGTGCGGTGCAGGCGTTTAATTCTCATC GGGAATTGTGGAATGGAACGTTGATGGCCGTTTTCCAGCCAGCGGAAGAGACGGCAGCTGGTGCGAGGATGATGGTGGAG GAGGGGATCGTCGAAAAGCTTTCTGCGCCGGATGTTTATCTAGGCCAGCATGTGCTGGGCTCCTTGCCCGGTGGGGCGGT GGGCACCCGGGTTGGGGCGGTGATGTCGGAGGCGGCGTCGATTGAAATTACGCTGCATGGCAAGGGTTCGCATGGTTCAA TGCCCAATTTGGGTGTGGATCCGATTGTGTTGGGCTCGGCGATCGTGACGCGCCTGCAGTCGGTGATTTCTCGGGAAATC GCAGCTAGTGAGACTGCAGTGCTGACCGTGGGCAGTTTTCATGCGGGCACAAAATCCAACATCATTCCCGATTCTGCGGT GTTGCAATTGAATACTCGCGCTTTTTCCAAGGATGTGGCGGCGCATTTGCATGAGGCGATCGAGCGGATTGTGCGCAGTG AATGTGCGGCTGCACGGTGCCCGGAGCCGCCAGAGTTTAAGTACTACGACCAATACCCATTAACCAGTAATGATGAGTCG GTGACTGCTCATGTTCGGGCGGCATTTGATGAGTTTTTCGGAGAGAATTCTGTCGATTTAGCGCAGGTGCCAGCCTCGGA AGACTTCTCGATCATCCCCGATGCGTTTGGAATTCCTTATTCTTACTGGGGATTGGGTGGATTTGCGGATCACCAAAACG CGCCGGGAAATCACTCCCCAGCGTTCGCGCCAGATATACAGCCAACTCTTGATCGTGGTGTGGAAGCGCTGGTTGTAGCT GCTTCTGCGTGGCTAGTGAAATAA
Upstream 100 bases:
>100_bases GCTACTGCCCTCACCATTCCACGGGCATTCCGTGCGGGGTAGAAGCTTAAAAGATTTTTGCTTTTCGACGCCTCCCTCCA CCTCGGATTACGCTTGGGGC
Downstream 100 bases:
>100_bases TTGGCTAATGAATCCTTTTCTTTCAGACACGTTGATTGTCCAGCAGACCTCTTCCTTCCTGTCTAACAACTTTGAGATTT ACAACCCAGACGGCGAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTISAILSDLDNTRSYREELYKFFHQHPELSLQEFETSKRIISELESYGVESIQRIGGTGVVAVISNGDGPVVALRGDID ALPMAERSGKEYAATGATQVDNNTGQETPVAHTCGHDVHISSLLGAVQAFNSHRELWNGTLMAVFQPAEETAAGARMMVE EGIVEKLSAPDVYLGQHVLGSLPGGAVGTRVGAVMSEAASIEITLHGKGSHGSMPNLGVDPIVLGSAIVTRLQSVISREI AASETAVLTVGSFHAGTKSNIIPDSAVLQLNTRAFSKDVAAHLHEAIERIVRSECAAARCPEPPEFKYYDQYPLTSNDES VTAHVRAAFDEFFGENSVDLAQVPASEDFSIIPDAFGIPYSYWGLGGFADHQNAPGNHSPAFAPDIQPTLDRGVEALVVA ASAWLVK
Sequences:
>Translated_407_residues MTISAILSDLDNTRSYREELYKFFHQHPELSLQEFETSKRIISELESYGVESIQRIGGTGVVAVISNGDGPVVALRGDID ALPMAERSGKEYAATGATQVDNNTGQETPVAHTCGHDVHISSLLGAVQAFNSHRELWNGTLMAVFQPAEETAAGARMMVE EGIVEKLSAPDVYLGQHVLGSLPGGAVGTRVGAVMSEAASIEITLHGKGSHGSMPNLGVDPIVLGSAIVTRLQSVISREI AASETAVLTVGSFHAGTKSNIIPDSAVLQLNTRAFSKDVAAHLHEAIERIVRSECAAARCPEPPEFKYYDQYPLTSNDES VTAHVRAAFDEFFGENSVDLAQVPASEDFSIIPDAFGIPYSYWGLGGFADHQNAPGNHSPAFAPDIQPTLDRGVEALVVA ASAWLVK >Mature_406_residues TISAILSDLDNTRSYREELYKFFHQHPELSLQEFETSKRIISELESYGVESIQRIGGTGVVAVISNGDGPVVALRGDIDA LPMAERSGKEYAATGATQVDNNTGQETPVAHTCGHDVHISSLLGAVQAFNSHRELWNGTLMAVFQPAEETAAGARMMVEE GIVEKLSAPDVYLGQHVLGSLPGGAVGTRVGAVMSEAASIEITLHGKGSHGSMPNLGVDPIVLGSAIVTRLQSVISREIA ASETAVLTVGSFHAGTKSNIIPDSAVLQLNTRAFSKDVAAHLHEAIERIVRSECAAARCPEPPEFKYYDQYPLTSNDESV TAHVRAAFDEFFGENSVDLAQVPASEDFSIIPDAFGIPYSYWGLGGFADHQNAPGNHSPAFAPDIQPTLDRGVEALVVAA SAWLVK
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=238, Percent_Identity=26.890756302521, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 43378; Mature: 43247
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISAILSDLDNTRSYREELYKFFHQHPELSLQEFETSKRIISELESYGVESIQRIGGTG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCE VVAVISNGDGPVVALRGDIDALPMAERSGKEYAATGATQVDNNTGQETPVAHTCGHDVHI EEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH SSLLGAVQAFNSHRELWNGTLMAVFQPAEETAAGARMMVEEGIVEKLSAPDVYLGQHVLG HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SLPGGAVGTRVGAVMSEAASIEITLHGKGSHGSMPNLGVDPIVLGSAIVTRLQSVISREI CCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AASETAVLTVGSFHAGTKSNIIPDSAVLQLNTRAFSKDVAAHLHEAIERIVRSECAAARC HCCCEEEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PEPPEFKYYDQYPLTSNDESVTAHVRAAFDEFFGENSVDLAQVPASEDFSIIPDAFGIPY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCC SYWGLGGFADHQNAPGNHSPAFAPDIQPTLDRGVEALVVAASAWLVK HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TISAILSDLDNTRSYREELYKFFHQHPELSLQEFETSKRIISELESYGVESIQRIGGTG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCE VVAVISNGDGPVVALRGDIDALPMAERSGKEYAATGATQVDNNTGQETPVAHTCGHDVHI EEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH SSLLGAVQAFNSHRELWNGTLMAVFQPAEETAAGARMMVEEGIVEKLSAPDVYLGQHVLG HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SLPGGAVGTRVGAVMSEAASIEITLHGKGSHGSMPNLGVDPIVLGSAIVTRLQSVISREI CCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AASETAVLTVGSFHAGTKSNIIPDSAVLQLNTRAFSKDVAAHLHEAIERIVRSECAAARC HCCCEEEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PEPPEFKYYDQYPLTSNDESVTAHVRAAFDEFFGENSVDLAQVPASEDFSIIPDAFGIPY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCC SYWGLGGFADHQNAPGNHSPAFAPDIQPTLDRGVEALVVAASAWLVK HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]