| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296868
Identifier: 145296868
GI number: 145296868
Start: 3072614
End: 3073612
Strand: Reverse
Name: 145296868
Synonym: cgR_2768
Alternate gene names: NA
Gene position: 3073612-3072614 (Counterclockwise)
Preceding gene: 145296869
Following gene: 145296867
Centisome position: 92.74
GC content: 56.96
Gene sequence:
>999_bases GTGAGCGAACACGCCGCTGAACATCACCGCGATACCCAAAATTTCTTAACCTCCGAACCGCACACCACGGCAATCGAAGA CAACAAGAAGCGCCAACCGCCGAAAAACCTTGCTGACGGCATGATCAAGGCGCTGCGCCCCAAGCAGTGGGTCAAGAACG TTCTTGTGCTAGCAGCACCACTTGCTGCTGGTGCAGATGCGATTTTCAACCAGCGCACGATCATCGACGTTGCTATCGCG TTCGTAGTGTTCTGCTTCGGCGCATCAGCCATTTACTTGGTTAATGATGCCCGTGACGTGGAAGCTGACCGCGAGCACCC AACCAAGCGTTTCCGCCCCATCGCCGCAGGAGTCCTACCAGTAGGTATGGCCTACGGCATGGCAGTGGTGCTCATTGCAC TATCCATCGGACTGTCCTTCCTCGCCACCGACGGCGTGGCACTTGCCTGCGTGATTGGCGTGTACATTGCGCTGCAGCTG GGATACTGCTTCGGTTGGAAGCACATGCCAGTGATCGATATTGCGCTTGTTTCCTCCGGATTCATGCTCCGCGCAATGGC CGGTGGTGTCGCAGCAGGCATCGAGCTGTCCCAGTGGTTCCTGCTGGTTGCAGCGTTTGGCTCGCTGTTCATGGCATCTG GAAAGCGCTACGCAGAAATCCTTCTGCACGAACGCACCGGAGCCAAAATCCGCAAATCCCTGGAAAGCTACACCCCCACC TACCTGCGCTTCGTTTGGACCATGTCAGCAACAGCAGTGGTCATGTCCTACGCACTGTGGGGCTTCGACCTTTCCCAACA CTCCACCGACGCAGGTCCGTGGTACCAAATCTCCATGGTTCCATTCACCATCGCCATCCTGCGCTACGCAGCCGGCGTAG ACACCGGCGACGGCGGTGCCCCTGACGAAGTGGCACTCAGCGACAAAGTTCTGCAGGTACTAGCCCTAGCATGGGTTTTC TGCATCGTGATGGCTGTGTACATCATGCCGATGTTTTAA
Upstream 100 bases:
>100_bases GCATGGTGCTTGGCGTGCATTACCCAACCGATGTGCTAGCCGGCGCGTTGTTGGGAGCAGCGACCGCAGAGGCCGTCCAT AAGATCGAAAGGGCTACGAA
Downstream 100 bases:
>100_bases ATATTTACCAATGAACATGCTCTGACCAGCATGTCCATTAACGTTTGAGGCCACATGCGGTGCTAGCATGTGGCCTCATG ACGTTTAGCCCCCAGCGTCC
Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSEHAAEHHRDTQNFLTSEPHTTAIEDNKKRQPPKNLADGMIKALRPKQWVKNVLVLAAPLAAGADAIFNQRTIIDVAIA FVVFCFGASAIYLVNDARDVEADREHPTKRFRPIAAGVLPVGMAYGMAVVLIALSIGLSFLATDGVALACVIGVYIALQL GYCFGWKHMPVIDIALVSSGFMLRAMAGGVAAGIELSQWFLLVAAFGSLFMASGKRYAEILLHERTGAKIRKSLESYTPT YLRFVWTMSATAVVMSYALWGFDLSQHSTDAGPWYQISMVPFTIAILRYAAGVDTGDGGAPDEVALSDKVLQVLALAWVF CIVMAVYIMPMF
Sequences:
>Translated_332_residues MSEHAAEHHRDTQNFLTSEPHTTAIEDNKKRQPPKNLADGMIKALRPKQWVKNVLVLAAPLAAGADAIFNQRTIIDVAIA FVVFCFGASAIYLVNDARDVEADREHPTKRFRPIAAGVLPVGMAYGMAVVLIALSIGLSFLATDGVALACVIGVYIALQL GYCFGWKHMPVIDIALVSSGFMLRAMAGGVAAGIELSQWFLLVAAFGSLFMASGKRYAEILLHERTGAKIRKSLESYTPT YLRFVWTMSATAVVMSYALWGFDLSQHSTDAGPWYQISMVPFTIAILRYAAGVDTGDGGAPDEVALSDKVLQVLALAWVF CIVMAVYIMPMF >Mature_331_residues SEHAAEHHRDTQNFLTSEPHTTAIEDNKKRQPPKNLADGMIKALRPKQWVKNVLVLAAPLAAGADAIFNQRTIIDVAIAF VVFCFGASAIYLVNDARDVEADREHPTKRFRPIAAGVLPVGMAYGMAVVLIALSIGLSFLATDGVALACVIGVYIALQLG YCFGWKHMPVIDIALVSSGFMLRAMAGGVAAGIELSQWFLLVAAFGSLFMASGKRYAEILLHERTGAKIRKSLESYTPTY LRFVWTMSATAVVMSYALWGFDLSQHSTDAGPWYQISMVPFTIAILRYAAGVDTGDGGAPDEVALSDKVLQVLALAWVFC IVMAVYIMPMF
Specific function: Possible permease/transporter [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: NA
Molecular weight: Translated: 36099; Mature: 35967
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHAAEHHRDTQNFLTSEPHTTAIEDNKKRQPPKNLADGMIKALRPKQWVKNVLVLAAP CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH LAAGADAIFNQRTIIDVAIAFVVFCFGASAIYLVNDARDVEADREHPTKRFRPIAAGVLP HHCCHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH VGMAYGMAVVLIALSIGLSFLATDGVALACVIGVYIALQLGYCFGWKHMPVIDIALVSSG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC FMLRAMAGGVAAGIELSQWFLLVAAFGSLFMASGKRYAEILLHERTGAKIRKSLESYTPT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCHH YLRFVWTMSATAVVMSYALWGFDLSQHSTDAGPWYQISMVPFTIAILRYAAGVDTGDGGA HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCC PDEVALSDKVLQVLALAWVFCIVMAVYIMPMF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEHAAEHHRDTQNFLTSEPHTTAIEDNKKRQPPKNLADGMIKALRPKQWVKNVLVLAAP CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH LAAGADAIFNQRTIIDVAIAFVVFCFGASAIYLVNDARDVEADREHPTKRFRPIAAGVLP HHCCHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH VGMAYGMAVVLIALSIGLSFLATDGVALACVIGVYIALQLGYCFGWKHMPVIDIALVSSG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC FMLRAMAGGVAAGIELSQWFLLVAAFGSLFMASGKRYAEILLHERTGAKIRKSLESYTPT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCHH YLRFVWTMSATAVVMSYALWGFDLSQHSTDAGPWYQISMVPFTIAILRYAAGVDTGDGGA HHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCC PDEVALSDKVLQVLALAWVFCIVMAVYIMPMF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]