Click here to switch to the map view.

The map label for this gene is yoaR [H]

Identifier: 145296838

GI number: 145296838

Start: 3032785

End: 3034476

Strand: Reverse

Name: yoaR [H]

Synonym: cgR_2739

Alternate gene names: 145296838

Gene position: 3034476-3032785 (Counterclockwise)

Preceding gene: 145296839

Following gene: 145296835

Centisome position: 91.56

GC content: 55.97

Gene sequence:

>1692_bases
GTGAAGAACTCTGGGAAAAATTCGGCAAAGAATCGGACCAAAGGGATCCTAATCGGGGTTCTCGTTGGTCTGATTGCCAT
TTTTGCAGGCATCTATGCGGTCGATGTTTTCCTCAACAAGGACAACATCCCTCGTGGAACAACCGTCGGTGGCGTCAGTA
TTTCCAACCTCAGCGCACAAGAAGCCCGCACAAAGTTGGAAACCGAACTGGCCAATGATGTGGTTCAGCCCGTCACCGTG
ACGGCAGGGGAGCAGAGCACCACTTTTGATCCAGTTGCCTCCGGCGTCGGCATCGATTGGGACGCAACCATCGAAGGCAC
CGGCGAGCAGTCTTGGAACCCCATTACCCGCTTCGTGGCGCTGTTCAAAGAATCCGAATCTCCCATCGTGAGCACCGTCG
ATCCGACAGCCTTCGGCCCAACCCTTGATCGCATGGTCGGCGAACTCTATCGAGATCCCATTTCCGGAAACCTGCATATC
GACGCCGGCACCCTCGTGGTCAACGACACCATCGACGGACAAGCCGTAGACCGCACCGTTTTGGAAAAAGCAGTCACAGA
AAACTGGCTCAACCCAGAGGGCGTAAAAGCCGAGCCATACGTTGTTCCCGCTGCGATCAGCCAAGACACCATCGATAAAC
TTGCAGAAGGCGCCGGAGCTAAAGCAGTATCTAGCCCTTTCGTCGTCCGAGGCGATGACGGAATTGAAGGCACGATCCCC
GTTGACCGCATGGGTGAAGTGGTGAGCTTCCCAGAAGAAAACGGCACCATCCGCGTCGACATCAATGCAGAAGCAGCCAC
AGCAATGCTGGCTGAAGGCCTCAAAGAAACAGAAATCGAGCCCACCAACGCTCAAATCAGTTTCTCCTCAGGCTCCCGCG
TAGTCACCCCAGAAGTTACCGGACACGGAATCAACTGGGAAGAAACCCTGGCCGATCTGCCCAACAACCTCACCGGCGAT
GGCCCCCGCACCATCGACGCAATCTACGAGGACACCCCAGCAACATTCACCGCCACCGACGCCCAAAACGCCACCTTCAA
TGAGGTCATGGGCGAGTTCACCACCGGCGGCTTCTCTGCTGCCTCCGGAACAAACATCCGCCTCACCGCGCAAATGGTCG
ACGGCGCAGTCGTTTCACCTGGCGATACATTCTCCCTCAACAACTACACCGGCCCACGTGGCGCAGCCCAAGGCTTTGTT
GATTCCGGCATCATTTTGAATGGTCGTTCTGACACCGCAGTCGGCGGTGGCATCAGTCAGTTCGCCACCACCTTGTACAA
CGCGTACTACTTCGCAGGTCTGGAAGACATCACGCACACCCCGCACAGCTACTATATTTCCCGCTACCCAGCCGGACGTG
AAGCTACGATTTTCGATGGCGCCATCGACCTTCAATTCCGCAACAACTCCCCATACCCCGTCATGATCAGCACCTCTGCC
GATGACTCAAACGTCACCGTGCGCATCATGGGTGTGGACACCACCTCCGTGGAATCCATCAACAACGGACGCTGGTCCAC
CACCCAGCCCAACACCGTTCGAGTATCGGGTTCAGATTGTGTGCCATCAACCGGTGCACCAGGATTTACCACCTCAGACA
CCCGAATCATCAGCGATCTTTCTGGCAACGAAATCACCAGAGAAACCGTCACCACGGTTTACGATCCTTCACCAAACGTG
GTTTGCTCCTAA

Upstream 100 bases:

>100_bases
CCAATTGCTCTACATCACACGTCTCGAACAAAAGTGAAGTTACCAGTCCGTAACCCCTTTTGAGTAGGAATTTCGCATCA
GTGCAACTAGCCTTTCAGGT

Downstream 100 bases:

>100_bases
AACAAAATGCCCCACCAGATATCTGGTGGGGCATTACTGATTATTTAGGAAGAAAGCGAACCGAAGAGCTTGAGCAGTGG
GCTCGCCAGCTGCTGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MKNSGKNSAKNRTKGILIGVLVGLIAIFAGIYAVDVFLNKDNIPRGTTVGGVSISNLSAQEARTKLETELANDVVQPVTV
TAGEQSTTFDPVASGVGIDWDATIEGTGEQSWNPITRFVALFKESESPIVSTVDPTAFGPTLDRMVGELYRDPISGNLHI
DAGTLVVNDTIDGQAVDRTVLEKAVTENWLNPEGVKAEPYVVPAAISQDTIDKLAEGAGAKAVSSPFVVRGDDGIEGTIP
VDRMGEVVSFPEENGTIRVDINAEAATAMLAEGLKETEIEPTNAQISFSSGSRVVTPEVTGHGINWEETLADLPNNLTGD
GPRTIDAIYEDTPATFTATDAQNATFNEVMGEFTTGGFSAASGTNIRLTAQMVDGAVVSPGDTFSLNNYTGPRGAAQGFV
DSGIILNGRSDTAVGGGISQFATTLYNAYYFAGLEDITHTPHSYYISRYPAGREATIFDGAIDLQFRNNSPYPVMISTSA
DDSNVTVRIMGVDTTSVESINNGRWSTTQPNTVRVSGSDCVPSTGAPGFTTSDTRIISDLSGNEITRETVTTVYDPSPNV
VCS

Sequences:

>Translated_563_residues
MKNSGKNSAKNRTKGILIGVLVGLIAIFAGIYAVDVFLNKDNIPRGTTVGGVSISNLSAQEARTKLETELANDVVQPVTV
TAGEQSTTFDPVASGVGIDWDATIEGTGEQSWNPITRFVALFKESESPIVSTVDPTAFGPTLDRMVGELYRDPISGNLHI
DAGTLVVNDTIDGQAVDRTVLEKAVTENWLNPEGVKAEPYVVPAAISQDTIDKLAEGAGAKAVSSPFVVRGDDGIEGTIP
VDRMGEVVSFPEENGTIRVDINAEAATAMLAEGLKETEIEPTNAQISFSSGSRVVTPEVTGHGINWEETLADLPNNLTGD
GPRTIDAIYEDTPATFTATDAQNATFNEVMGEFTTGGFSAASGTNIRLTAQMVDGAVVSPGDTFSLNNYTGPRGAAQGFV
DSGIILNGRSDTAVGGGISQFATTLYNAYYFAGLEDITHTPHSYYISRYPAGREATIFDGAIDLQFRNNSPYPVMISTSA
DDSNVTVRIMGVDTTSVESINNGRWSTTQPNTVRVSGSDCVPSTGAPGFTTSDTRIISDLSGNEITRETVTTVYDPSPNV
VCS
>Mature_563_residues
MKNSGKNSAKNRTKGILIGVLVGLIAIFAGIYAVDVFLNKDNIPRGTTVGGVSISNLSAQEARTKLETELANDVVQPVTV
TAGEQSTTFDPVASGVGIDWDATIEGTGEQSWNPITRFVALFKESESPIVSTVDPTAFGPTLDRMVGELYRDPISGNLHI
DAGTLVVNDTIDGQAVDRTVLEKAVTENWLNPEGVKAEPYVVPAAISQDTIDKLAEGAGAKAVSSPFVVRGDDGIEGTIP
VDRMGEVVSFPEENGTIRVDINAEAATAMLAEGLKETEIEPTNAQISFSSGSRVVTPEVTGHGINWEETLADLPNNLTGD
GPRTIDAIYEDTPATFTATDAQNATFNEVMGEFTTGGFSAASGTNIRLTAQMVDGAVVSPGDTFSLNNYTGPRGAAQGFV
DSGIILNGRSDTAVGGGISQFATTLYNAYYFAGLEDITHTPHSYYISRYPAGREATIFDGAIDLQFRNNSPYPVMISTSA
DDSNVTVRIMGVDTTSVESINNGRWSTTQPNTVRVSGSDCVPSTGAPGFTTSDTRIISDLSGNEITRETVTTVYDPSPNV
VCS

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 59401; Mature: 59401

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSGKNSAKNRTKGILIGVLVGLIAIFAGIYAVDVFLNKDNIPRGTTVGGVSISNLSAQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEECCEEECCCCHH
EARTKLETELANDVVQPVTVTAGEQSTTFDPVASGVGIDWDATIEGTGEQSWNPITRFVA
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCHHHHHHH
LFKESESPIVSTVDPTAFGPTLDRMVGELYRDPISGNLHIDAGTLVVNDTIDGQAVDRTV
HHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCHHHHHHH
LEKAVTENWLNPEGVKAEPYVVPAAISQDTIDKLAEGAGAKAVSSPFVVRGDDGIEGTIP
HHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHCCCEEEECCCCCCCCCC
VDRMGEVVSFPEENGTIRVDINAEAATAMLAEGLKETEIEPTNAQISFSSGSRVVTPEVT
HHHCCHHHCCCCCCCEEEEEECCHHHHHHHHCCHHHCCCCCCCCEEEECCCCEEEECCCC
GHGINWEETLADLPNNLTGDGPRTIDAIYEDTPATFTATDAQNATFNEVMGEFTTGGFSA
CCCCCHHHHHHHCCCCCCCCCCCEEHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCC
ASGTNIRLTAQMVDGAVVSPGDTFSLNNYTGPRGAAQGFVDSGIILNGRSDTAVGGGISQ
CCCCEEEEEEEEECCEEECCCCCEEECCCCCCCHHHCCCCCCCEEEECCCCCCCCCCHHH
FATTLYNAYYFAGLEDITHTPHSYYISRYPAGREATIFDGAIDLQFRNNSPYPVMISTSA
HHHHHHHHHHEECHHHHCCCCCCEEEEECCCCCCEEEECCEEEEEECCCCCCEEEEECCC
DDSNVTVRIMGVDTTSVESINNGRWSTTQPNTVRVSGSDCVPSTGAPGFTTSDTRIISDL
CCCCEEEEEEECCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECC
SGNEITRETVTTVYDPSPNVVCS
CCCEEEHHHEEEEECCCCCCEEC
>Mature Secondary Structure
MKNSGKNSAKNRTKGILIGVLVGLIAIFAGIYAVDVFLNKDNIPRGTTVGGVSISNLSAQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEECCEEECCCCHH
EARTKLETELANDVVQPVTVTAGEQSTTFDPVASGVGIDWDATIEGTGEQSWNPITRFVA
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCHHHHHHH
LFKESESPIVSTVDPTAFGPTLDRMVGELYRDPISGNLHIDAGTLVVNDTIDGQAVDRTV
HHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCHHHHHHH
LEKAVTENWLNPEGVKAEPYVVPAAISQDTIDKLAEGAGAKAVSSPFVVRGDDGIEGTIP
HHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHCCCEEEECCCCCCCCCC
VDRMGEVVSFPEENGTIRVDINAEAATAMLAEGLKETEIEPTNAQISFSSGSRVVTPEVT
HHHCCHHHCCCCCCCEEEEEECCHHHHHHHHCCHHHCCCCCCCCEEEECCCCEEEECCCC
GHGINWEETLADLPNNLTGDGPRTIDAIYEDTPATFTATDAQNATFNEVMGEFTTGGFSA
CCCCCHHHHHHHCCCCCCCCCCCEEHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCC
ASGTNIRLTAQMVDGAVVSPGDTFSLNNYTGPRGAAQGFVDSGIILNGRSDTAVGGGISQ
CCCCEEEEEEEEECCEEECCCCCEEECCCCCCCHHHCCCCCCCEEEECCCCCCCCCCHHH
FATTLYNAYYFAGLEDITHTPHSYYISRYPAGREATIFDGAIDLQFRNNSPYPVMISTSA
HHHHHHHHHHEECHHHHCCCCCCEEEEECCCCCCEEEECCEEEEEECCCCCCEEEEECCC
DDSNVTVRIMGVDTTSVESINNGRWSTTQPNTVRVSGSDCVPSTGAPGFTTSDTRIISDL
CCCCEEEEEEECCCCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECC
SGNEITRETVTTVYDPSPNVVCS
CCCEEEHHHEEEEECCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]