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The map label for this gene is dcd [H]

Identifier: 145296835

GI number: 145296835

Start: 3030628

End: 3031197

Strand: Reverse

Name: dcd [H]

Synonym: cgR_2737

Alternate gene names: 145296835

Gene position: 3031197-3030628 (Counterclockwise)

Preceding gene: 145296838

Following gene: 145296834

Centisome position: 91.46

GC content: 52.28

Gene sequence:

>570_bases
GTGCTTCTTTCAGATCGTGACATTCGTAAATCAATTGACGCAGGCGACTTGGGAATTGAACCTTTCGACGCTGAGCTGAT
TCAGCCGTCGAGTGTCGATGTCCGCATGGACCGTTACTTCCGGGTTTTCAATAACTCTAAGTACACCCACATTGACCCTA
AGTTGAATCAGGATGAGCTGACCAGCCTTGTTGAGGTTGAGGACGGCGAGGGCTTTGTGCTGCATCCGGGTGAGTTTGTG
CTGGCGTCCACGCTGGAAAAGTTCACTTTGCCTGCGCATCTGGCTGGTCGTTTGGAGGGCAAGTCGTCTCTTGGTCGTCT
TGGCTTGTTGACGCACTCTACTGCTGGTTTCATTGATCCTGGTTTTAGCGGTTACATCACGTTGGAGTTGTCCAATGTGG
CTAATCTGCCGATCACGTTGTGGCCGGGTATGAAGGTGGGGCAGTTGGCTTTGTTCCAGATGAGTTCCCCTGCGGAGACT
CCGTATGGTTCCGGCAAGCTTGGTTCGAAGTATCAGGGGCAGCGTGGTCCTACTCCTTCGAAGGCGTACCTGAATTTCCC
CAACAAGTAA

Upstream 100 bases:

>100_bases
GCTAGCACGATAAAAATCAGCGCCAGCACCACGCGCCCCAGGAACCTCATCGCAGCAACCCGTGGCCCAACCCTGAACGC
TGAACGCTACACTGGTTGAC

Downstream 100 bases:

>100_bases
GCAATCATGTGTTCCGGTCGCGGGCTGTATCAAAACGTGTTGAGATAATCTCCAGTCCACTCTTCATTGAAAGGAATCAC
CCTACATGCGGATGACAGTG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MLLSDRDIRKSIDAGDLGIEPFDAELIQPSSVDVRMDRYFRVFNNSKYTHIDPKLNQDELTSLVEVEDGEGFVLHPGEFV
LASTLEKFTLPAHLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGYITLELSNVANLPITLWPGMKVGQLALFQMSSPAET
PYGSGKLGSKYQGQRGPTPSKAYLNFPNK

Sequences:

>Translated_189_residues
MLLSDRDIRKSIDAGDLGIEPFDAELIQPSSVDVRMDRYFRVFNNSKYTHIDPKLNQDELTSLVEVEDGEGFVLHPGEFV
LASTLEKFTLPAHLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGYITLELSNVANLPITLWPGMKVGQLALFQMSSPAET
PYGSGKLGSKYQGQRGPTPSKAYLNFPNK
>Mature_189_residues
MLLSDRDIRKSIDAGDLGIEPFDAELIQPSSVDVRMDRYFRVFNNSKYTHIDPKLNQDELTSLVEVEDGEGFVLHPGEFV
LASTLEKFTLPAHLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGYITLELSNVANLPITLWPGMKVGQLALFQMSSPAET
PYGSGKLGSKYQGQRGPTPSKAYLNFPNK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=190, Percent_Identity=43.6842105263158, Blast_Score=144, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 20689; Mature: 20689

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSDRDIRKSIDAGDLGIEPFDAELIQPSSVDVRMDRYFRVFNNSKYTHIDPKLNQDEL
CCCCCCHHHHHCCCCCCCCCCCCHHEECCCCCEEEHHHEEEEECCCCEEEECCCCCHHHH
TSLVEVEDGEGFVLHPGEFVLASTLEKFTLPAHLAGRLEGKSSLGRLGLLTHSTAGFIDP
CEEEEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCC
GFSGYITLELSNVANLPITLWPGMKVGQLALFQMSSPAETPYGSGKLGSKYQGQRGPTPS
CCCCEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
KAYLNFPNK
CEEEECCCC
>Mature Secondary Structure
MLLSDRDIRKSIDAGDLGIEPFDAELIQPSSVDVRMDRYFRVFNNSKYTHIDPKLNQDEL
CCCCCCHHHHHCCCCCCCCCCCCHHEECCCCCEEEHHHEEEEECCCCEEEECCCCCHHHH
TSLVEVEDGEGFVLHPGEFVLASTLEKFTLPAHLAGRLEGKSSLGRLGLLTHSTAGFIDP
CEEEEEECCCEEEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCC
GFSGYITLELSNVANLPITLWPGMKVGQLALFQMSSPAETPYGSGKLGSKYQGQRGPTPS
CCCCEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
KAYLNFPNK
CEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]