| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is hmp [H]
Identifier: 145296821
GI number: 145296821
Start: 3014802
End: 3015962
Strand: Reverse
Name: hmp [H]
Synonym: cgR_2724
Alternate gene names: 145296821
Gene position: 3015962-3014802 (Counterclockwise)
Preceding gene: 145296824
Following gene: 145296817
Centisome position: 91.0
GC content: 56.33
Gene sequence:
>1161_bases GTGATCGTTTCCACCCAGCCCATTACTGATCGCAGCGCACTCTCGGCAGAACACGCAGAGGTGATCAAAGCAACGCTTCC TCTCGTGGGCGGCAAGATTAATGAGATCACGCCGGTTTTTTACAACAAGATGTTTGCGGCTCACCCAGAATTGATCGCTA ACACCTTCAACCGTGGCAATCAGAAGCAAGGCGATCAGCAGAAGGCGCTGGCGGCTTCGATTGCAACGTTTGCCACCATG CTCGTTACTCCTGATGCTCCGGACCCAGTTCAGCTGCTGTCCCGCATTGGTCACAAGCACGTGTCCCTTGGCATTACTGC TGATCAGTACAACATTGTTCACGAGCACCTTTTTGCCGCAATCGTTGAGGTTTTGGGAGCGGAAACTGTCACCGCACCTG TCGCTGAAGCATGGGATGCCGTGTACTGGATGATGGCCAACGTGCTCATCGGTTTTGAGAACAGCCTTTATGCATCCAAC GATCTGGAGCCTGGCGATGTCTTCCGTGAAGTCACCGTGACCGCGAAGAAGCAGCTCAGCGCAACCGTCTGGGAATACAC CCTGGCAGGTGAGCTGGTTGCCCCAGAGCCAGGTCAGTACACCTCCATCGGAGTAGTGCTTGACGACGGCGCCCGCCAAC TGCGCCAGTACAGCTTGCTCGGTGGCTCCAGTTCCGAGTACCGCATTGCAGTTGAGGATAACGGCGAGGTTTCTGGATTC CTGCGTGATCGCGTATCCGTTGGTGACAAGATCGAAGCCACCATCGCGGCCGGCGACCTGGTTCTTAACAAGGACACCAA TCCAGTCGTGCTGATTTCCCAGGGCATCGGCTCCACCCCAATGGTGGGCATGCTCGCAGGCATGGATCCAGAGCGGGACG TTGTGGTTTTGCACGCTGACCAGGCCGAGTCCACCTACGCGCAGGTGGAGGAAGTGCAGGGGCTCGTCGAAAAGCTCCCT AAGGCTGCGTTTGAAATCTTCTACCGCGACAACGACCAGTGGCTCGAGGTCGCTGGCCGCATTCCATCAGGTGCGTCCGT GTACCTGTGTGGTGGCGTGGAATTCTTGAAGAATGTCCGTGGCCAGATTGAAGCGTTGGAAGAGCAGCCACGCGATGTGA ACTTCGAGCTGTTCTCACCAAACGACTGGCTGATTTCCTAA
Upstream 100 bases:
>100_bases TGCCATCATATTAAGGCCAAATTGCTTGGATCCTGGGATTTATTTAATTAGATTAAATCCGTAGAAATTAACCCATGAAG CATGGAAAGGCGAAAACCCC
Downstream 100 bases:
>100_bases GCCCACACCCCAGAACTTCCACGGCGATGGCTGCCCACCAAATGGGTATCGATGATCCCTATGGCCTCCATGAGGGCAAA CATCGTGGTGGGACCAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: Flavohemoglobin; Hemoglobin-like protein; Nitric oxide dioxygenase; NO oxygenase; NOD [H]
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MIVSTQPITDRSALSAEHAEVIKATLPLVGGKINEITPVFYNKMFAAHPELIANTFNRGNQKQGDQQKALAASIATFATM LVTPDAPDPVQLLSRIGHKHVSLGITADQYNIVHEHLFAAIVEVLGAETVTAPVAEAWDAVYWMMANVLIGFENSLYASN DLEPGDVFREVTVTAKKQLSATVWEYTLAGELVAPEPGQYTSIGVVLDDGARQLRQYSLLGGSSSEYRIAVEDNGEVSGF LRDRVSVGDKIEATIAAGDLVLNKDTNPVVLISQGIGSTPMVGMLAGMDPERDVVVLHADQAESTYAQVEEVQGLVEKLP KAAFEIFYRDNDQWLEVAGRIPSGASVYLCGGVEFLKNVRGQIEALEEQPRDVNFELFSPNDWLIS
Sequences:
>Translated_386_residues MIVSTQPITDRSALSAEHAEVIKATLPLVGGKINEITPVFYNKMFAAHPELIANTFNRGNQKQGDQQKALAASIATFATM LVTPDAPDPVQLLSRIGHKHVSLGITADQYNIVHEHLFAAIVEVLGAETVTAPVAEAWDAVYWMMANVLIGFENSLYASN DLEPGDVFREVTVTAKKQLSATVWEYTLAGELVAPEPGQYTSIGVVLDDGARQLRQYSLLGGSSSEYRIAVEDNGEVSGF LRDRVSVGDKIEATIAAGDLVLNKDTNPVVLISQGIGSTPMVGMLAGMDPERDVVVLHADQAESTYAQVEEVQGLVEKLP KAAFEIFYRDNDQWLEVAGRIPSGASVYLCGGVEFLKNVRGQIEALEEQPRDVNFELFSPNDWLIS >Mature_386_residues MIVSTQPITDRSALSAEHAEVIKATLPLVGGKINEITPVFYNKMFAAHPELIANTFNRGNQKQGDQQKALAASIATFATM LVTPDAPDPVQLLSRIGHKHVSLGITADQYNIVHEHLFAAIVEVLGAETVTAPVAEAWDAVYWMMANVLIGFENSLYASN DLEPGDVFREVTVTAKKQLSATVWEYTLAGELVAPEPGQYTSIGVVLDDGARQLRQYSLLGGSSSEYRIAVEDNGEVSGF LRDRVSVGDKIEATIAAGDLVLNKDTNPVVLISQGIGSTPMVGMLAGMDPERDVVVLHADQAESTYAQVEEVQGLVEKLP KAAFEIFYRDNDQWLEVAGRIPSGASVYLCGGVEFLKNVRGQIEALEEQPRDVNFELFSPNDWLIS
Specific function: Possesses Dihydropteridine Reductase Activity. Also Has Nitric Oxide Dioxygenase Activity. Seems To Reduces The Complexed Fe(3+) Iron Of Siderophores To Fe(2+), Thus Releasing It From The Chelator. [C]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788903, Length=401, Percent_Identity=32.1695760598504, Blast_Score=169, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6321673, Length=399, Percent_Identity=30.8270676691729, Blast_Score=152, Evalue=6e-38,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR012292 - InterPro: IPR009050 - InterPro: IPR000971 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00042 Globin; PF00175 NAD_binding_1 [H]
EC number: =1.14.12.17 [H]
Molecular weight: Translated: 41918; Mature: 41918
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS01033 GLOBIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSTQPITDRSALSAEHAEVIKATLPLVGGKINEITPVFYNKMFAAHPELIANTFNRGN CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCC QKQGDQQKALAASIATFATMLVTPDAPDPVQLLSRIGHKHVSLGITADQYNIVHEHLFAA CCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHH IVEVLGAETVTAPVAEAWDAVYWMMANVLIGFENSLYASNDLEPGDVFREVTVTAKKQLS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ATVWEYTLAGELVAPEPGQYTSIGVVLDDGARQLRQYSLLGGSSSEYRIAVEDNGEVSGF HHHHEEEECCCEECCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH LRDRVSVGDKIEATIAAGDLVLNKDTNPVVLISQGIGSTPMVGMLAGMDPERDVVVLHAD HHHHHCCCCCEEEEEEECEEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCCCEEEEECC QAESTYAQVEEVQGLVEKLPKAAFEIFYRDNDQWLEVAGRIPSGASVYLCGGVEFLKNVR CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCCCCCCCCEEEEECCHHHHHHHH GQIEALEEQPRDVNFELFSPNDWLIS HHHHHHHCCCCCCCEEEECCCCCCCC >Mature Secondary Structure MIVSTQPITDRSALSAEHAEVIKATLPLVGGKINEITPVFYNKMFAAHPELIANTFNRGN CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCC QKQGDQQKALAASIATFATMLVTPDAPDPVQLLSRIGHKHVSLGITADQYNIVHEHLFAA CCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHH IVEVLGAETVTAPVAEAWDAVYWMMANVLIGFENSLYASNDLEPGDVFREVTVTAKKQLS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ATVWEYTLAGELVAPEPGQYTSIGVVLDDGARQLRQYSLLGGSSSEYRIAVEDNGEVSGF HHHHEEEECCCEECCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH LRDRVSVGDKIEATIAAGDLVLNKDTNPVVLISQGIGSTPMVGMLAGMDPERDVVVLHAD HHHHHCCCCCEEEEEEECEEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCCCEEEEECC QAESTYAQVEEVQGLVEKLPKAAFEIFYRDNDQWLEVAGRIPSGASVYLCGGVEFLKNVR CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCCCCCCCCEEEEECCHHHHHHHH GQIEALEEQPRDVNFELFSPNDWLIS HHHHHHHCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]