Click here to switch to the map view.

The map label for this gene is yddS [H]

Identifier: 145296810

GI number: 145296810

Start: 3003338

End: 3004549

Strand: Direct

Name: yddS [H]

Synonym: cgR_2713

Alternate gene names: 145296810

Gene position: 3003338-3004549 (Clockwise)

Preceding gene: 145296804

Following gene: 145296812

Centisome position: 90.62

GC content: 56.44

Gene sequence:

>1212_bases
ATGCACGCCCCTTCGTCCCAACCTCACCCTCAGCGCACCCGTGTTCTCAGCGGCCTGATTTTCGCCCAAATCATGGTTGG
CGCCTCCAATGGCGTGACGCTGTCGATGGGAAGTTTACTGGCAGCGCACCTGGCGGGTGCTTCATGGGGTGGATCAGCTG
CCACGTTAACCACGATCGGCGCAGCTATCTTCTCTATTCCCCTTGCCCGCATGGTCTCAAAATTCGATCGCCGCACTTCA
CTGAGCACCGGCATGCTGCTTGGCTGCATGGGCGCATTTTTAGCCATCATCGGCGCACAATTCGGCCTGTTTCCTATCGT
ACTTTTAGCATTTTTATTCCTCGGATCCATGTCAGCGGTCAATCTCCAAGCACGTTTCGCCGCAACCGATGTGGCTAGTG
AAGAAACCCGCGGACGAGACTTGTCGATCGTCGTTTGGTCCACCACCATCGGCGCAATTGCCGGACCAAATCTCTTTGAA
CCCAGTGCCAGATTCAGCGAAGCCCTCGGCCTCGAACAACATGCCGGCGCCTACCTGTTATGTCTATTTGGCCAGCTCAT
CGCCATCGCAGTCTGGCGATTCACCCTCCCCAAAGGCCTCAAACCCGAGACCTTGACACACAAATCCACGGAGAAAAAGC
GCCTTACTCCGAAAGCCCTCCAAGCAATCACCTCGGTCGCAACCGCCCATTTCTCCATGGTCGGTCTCATGTCCATGGCC
GCGATCCACATGCAAGGCCACGGCGCAGGCCTCACCATCATCGGCTTCACCATCAGTTTGCACGTCGCCGGAATGTACGC
ACTCTCACCAGTGTTCGGCCTGCTCACAGACAAACTCGGCCGCAATGTCACCATCTATTCTGGCTTTGCCATGATCGCCG
CATCCGCAGCATTTCTTGTCATTTGGCCCGAACCACAGTGGGCCATGATCACATCCATGATCCTGCTTGGGCTCGGCTGG
AACTCTGCCCTCGTCGGTTCTTCAACATTGCTTGTCGACGCCACCCCCATCCATCACCGCACCTACGCCCAGGGGCGCAG
CGACCTAACGATGAATCTTGCGGGAGCTTCAGGCGGGTTGATCGCCGGACCGTTAATTGCCATGGGCGGAATGCCCTTGT
TGGCAGGCGTCGTTCTTGCAGTTGTGGCGCTTCAAACGGTGCTTAGTTTCAGAACCCGTTCAATTGAAAAGACGCCTGCT
TCATGTTTTTAG

Upstream 100 bases:

>100_bases
GACTCCGGATGATCAAGCAGCGAAACCTTTGTCAAGAACATAACTCCCCACCCTAGACAAAAGCCCAAATAAATCTGCTC
AATAACCTAACCTAAAGTCC

Downstream 100 bases:

>100_bases
CCTAGGAATTCACGCACGACGGAGTCATAACCCCGAACAGTCAGTTCAAGATCTTCCAGGTACAGCGCCTCGTCATGGGA
GTGAAGTTGCCCCATTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MHAPSSQPHPQRTRVLSGLIFAQIMVGASNGVTLSMGSLLAAHLAGASWGGSAATLTTIGAAIFSIPLARMVSKFDRRTS
LSTGMLLGCMGAFLAIIGAQFGLFPIVLLAFLFLGSMSAVNLQARFAATDVASEETRGRDLSIVVWSTTIGAIAGPNLFE
PSARFSEALGLEQHAGAYLLCLFGQLIAIAVWRFTLPKGLKPETLTHKSTEKKRLTPKALQAITSVATAHFSMVGLMSMA
AIHMQGHGAGLTIIGFTISLHVAGMYALSPVFGLLTDKLGRNVTIYSGFAMIAASAAFLVIWPEPQWAMITSMILLGLGW
NSALVGSSTLLVDATPIHHRTYAQGRSDLTMNLAGASGGLIAGPLIAMGGMPLLAGVVLAVVALQTVLSFRTRSIEKTPA
SCF

Sequences:

>Translated_403_residues
MHAPSSQPHPQRTRVLSGLIFAQIMVGASNGVTLSMGSLLAAHLAGASWGGSAATLTTIGAAIFSIPLARMVSKFDRRTS
LSTGMLLGCMGAFLAIIGAQFGLFPIVLLAFLFLGSMSAVNLQARFAATDVASEETRGRDLSIVVWSTTIGAIAGPNLFE
PSARFSEALGLEQHAGAYLLCLFGQLIAIAVWRFTLPKGLKPETLTHKSTEKKRLTPKALQAITSVATAHFSMVGLMSMA
AIHMQGHGAGLTIIGFTISLHVAGMYALSPVFGLLTDKLGRNVTIYSGFAMIAASAAFLVIWPEPQWAMITSMILLGLGW
NSALVGSSTLLVDATPIHHRTYAQGRSDLTMNLAGASGGLIAGPLIAMGGMPLLAGVVLAVVALQTVLSFRTRSIEKTPA
SCF
>Mature_403_residues
MHAPSSQPHPQRTRVLSGLIFAQIMVGASNGVTLSMGSLLAAHLAGASWGGSAATLTTIGAAIFSIPLARMVSKFDRRTS
LSTGMLLGCMGAFLAIIGAQFGLFPIVLLAFLFLGSMSAVNLQARFAATDVASEETRGRDLSIVVWSTTIGAIAGPNLFE
PSARFSEALGLEQHAGAYLLCLFGQLIAIAVWRFTLPKGLKPETLTHKSTEKKRLTPKALQAITSVATAHFSMVGLMSMA
AIHMQGHGAGLTIIGFTISLHVAGMYALSPVFGLLTDKLGRNVTIYSGFAMIAASAAFLVIWPEPQWAMITSMILLGLGW
NSALVGSSTLLVDATPIHHRTYAQGRSDLTMNLAGASGGLIAGPLIAMGGMPLLAGVVLAVVALQTVLSFRTRSIEKTPA
SCF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 42152; Mature: 42152

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAPSSQPHPQRTRVLSGLIFAQIMVGASNGVTLSMGSLLAAHLAGASWGGSAATLTTIG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHH
AAIFSIPLARMVSKFDRRTSLSTGMLLGCMGAFLAIIGAQFGLFPIVLLAFLFLGSMSAV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
NLQARFAATDVASEETRGRDLSIVVWSTTIGAIAGPNLFEPSARFSEALGLEQHAGAYLL
EEEEHHHHHHCCCHHCCCCEEEEEEEECCHHHHCCCCCCCCCHHHHHHHCCHHHCCHHHH
CLFGQLIAIAVWRFTLPKGLKPETLTHKSTEKKRLTPKALQAITSVATAHFSMVGLMSMA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIHMQGHGAGLTIIGFTISLHVAGMYALSPVFGLLTDKLGRNVTIYSGFAMIAASAAFLV
HHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCCEEEE
IWPEPQWAMITSMILLGLGWNSALVGSSTLLVDATPIHHRTYAQGRSDLTMNLAGASGGL
EECCCCHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCCCC
IAGPLIAMGGMPLLAGVVLAVVALQTVLSFRTRSIEKTPASCF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHAPSSQPHPQRTRVLSGLIFAQIMVGASNGVTLSMGSLLAAHLAGASWGGSAATLTTIG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHH
AAIFSIPLARMVSKFDRRTSLSTGMLLGCMGAFLAIIGAQFGLFPIVLLAFLFLGSMSAV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
NLQARFAATDVASEETRGRDLSIVVWSTTIGAIAGPNLFEPSARFSEALGLEQHAGAYLL
EEEEHHHHHHCCCHHCCCCEEEEEEEECCHHHHCCCCCCCCCHHHHHHHCCHHHCCHHHH
CLFGQLIAIAVWRFTLPKGLKPETLTHKSTEKKRLTPKALQAITSVATAHFSMVGLMSMA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AIHMQGHGAGLTIIGFTISLHVAGMYALSPVFGLLTDKLGRNVTIYSGFAMIAASAAFLV
HHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCCCEEEE
IWPEPQWAMITSMILLGLGWNSALVGSSTLLVDATPIHHRTYAQGRSDLTMNLAGASGGL
EECCCCHHHHHHHHHHHCCCCCHHCCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCCCC
IAGPLIAMGGMPLLAGVVLAVVALQTVLSFRTRSIEKTPASCF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]