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The map label for this gene is dapA [H]

Identifier: 145296643

GI number: 145296643

Start: 2817900

End: 2818838

Strand: Direct

Name: dapA [H]

Synonym: cgR_2551

Alternate gene names: 145296643

Gene position: 2817900-2818838 (Clockwise)

Preceding gene: 145296636

Following gene: 145296644

Centisome position: 85.03

GC content: 56.44

Gene sequence:

>939_bases
ATGGCTTCCGCAACTTTCACCGGCGTGATCCCACCCGTAATGACCCCACTCCACGCCGACGGCAGCGTGGATGTAGAAAG
CCTCCGCAAGCTCGTTGACCACCTCATCAATGGTGGCGTCGACGGACTTTTCGCACTGGGCTCCTCAGGCGAAGCGGCAT
TCCTCACCCGCACCCAGCGCAAGCTTGCACTGACCACTATCATCGAGCACACCGCAGGCCGCGTTCCCGTAACTGCTGGT
GTCATTGAAACCACCACTGCTCGCGTGATTGAGCTCGTGGAAGATGCCCTGGAGGCTGGTGCCGAAGGCCTCGTTGCCAC
TGCACCTTTCTACACCCGCACCCACGATGTGGAAATTGAAGAACACTTCCGCAAGATCCACGCCGCTGCTCCAGAGCTTC
CACTGTTTGCCTACAACATCCCAGTGTCGGTGCATTCCAACCTCAACCCAGTCATGCTTTTGACGCTGGCCAAGGATGGC
GTTCTTGCAGGCACCAAGGATTCCAGTGGCAATGATGGCGCAATCCGCTCACTGATCGAAGCTCGTGATGATGCTGGACT
CACTGAGCGGTTCAAGATCCTCACCGGCAGCGAAACCACCGTTGATTTCGCCTACCTTGCTGGTGCCGATGGAGTTGTCC
CAGGCCTGGGCAATGTTGATCCTGCAGCATACGCAGCTTTAGCAAAACTCTGCCTCGATGGAAAGTGGGCAGAAGCTGCT
GCTTTGCAGAAGCGCATCAACCACCTCTTCCACATCGTCTTCGTGGGAGACACCTCCCATATGTCCGGATCCAGCGCTGG
TTTGGGCGGTTTCAAGACAGCACTCGCACACCTTGGCATTATTGAATCCAATGCGATGGCAGTTCCTCACCAGAGCCTCA
GCGACGAAGAAACGGCTCGCATTCACGCCATTGTTGATGAATTCCTGTACACCGCTTAA

Upstream 100 bases:

>100_bases
TACCTCAGCCTTCCAAGCTGATGATGCATTACTTAAAAAAACTGCAGACACTTGAAAAACTTCTCACCCGCACTCGTTCC
CTCAACCCACAAGGAGCACC

Downstream 100 bases:

>100_bases
GGCCCACACCTCATGACTGATCCCACTTGCACCCTTGCCCTTGATATTGGTGCCACAAAGATTGCCTACGCACTAGTCCC
CGATAACGCCCCGACGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MASATFTGVIPPVMTPLHADGSVDVESLRKLVDHLINGGVDGLFALGSSGEAAFLTRTQRKLALTTIIEHTAGRVPVTAG
VIETTTARVIELVEDALEAGAEGLVATAPFYTRTHDVEIEEHFRKIHAAAPELPLFAYNIPVSVHSNLNPVMLLTLAKDG
VLAGTKDSSGNDGAIRSLIEARDDAGLTERFKILTGSETTVDFAYLAGADGVVPGLGNVDPAAYAALAKLCLDGKWAEAA
ALQKRINHLFHIVFVGDTSHMSGSSAGLGGFKTALAHLGIIESNAMAVPHQSLSDEETARIHAIVDEFLYTA

Sequences:

>Translated_312_residues
MASATFTGVIPPVMTPLHADGSVDVESLRKLVDHLINGGVDGLFALGSSGEAAFLTRTQRKLALTTIIEHTAGRVPVTAG
VIETTTARVIELVEDALEAGAEGLVATAPFYTRTHDVEIEEHFRKIHAAAPELPLFAYNIPVSVHSNLNPVMLLTLAKDG
VLAGTKDSSGNDGAIRSLIEARDDAGLTERFKILTGSETTVDFAYLAGADGVVPGLGNVDPAAYAALAKLCLDGKWAEAA
ALQKRINHLFHIVFVGDTSHMSGSSAGLGGFKTALAHLGIIESNAMAVPHQSLSDEETARIHAIVDEFLYTA
>Mature_311_residues
ASATFTGVIPPVMTPLHADGSVDVESLRKLVDHLINGGVDGLFALGSSGEAAFLTRTQRKLALTTIIEHTAGRVPVTAGV
IETTTARVIELVEDALEAGAEGLVATAPFYTRTHDVEIEEHFRKIHAAAPELPLFAYNIPVSVHSNLNPVMLLTLAKDGV
LAGTKDSSGNDGAIRSLIEARDDAGLTERFKILTGSETTVDFAYLAGADGVVPGLGNVDPAAYAALAKLCLDGKWAEAAA
LQKRINHLFHIVFVGDTSHMSGSSAGLGGFKTALAHLGIIESNAMAVPHQSLSDEETARIHAIVDEFLYTA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=241, Percent_Identity=27.3858921161826, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI13540533, Length=214, Percent_Identity=25.7009345794392, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1786463, Length=245, Percent_Identity=35.5102040816327, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI87082415, Length=245, Percent_Identity=31.0204081632653, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1788823, Length=298, Percent_Identity=28.1879194630872, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1789620, Length=310, Percent_Identity=25.1612903225806, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 32784; Mature: 32652

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASATFTGVIPPVMTPLHADGSVDVESLRKLVDHLINGGVDGLFALGSSGEAAFLTRTQR
CCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHH
KLALTTIIEHTAGRVPVTAGVIETTTARVIELVEDALEAGAEGLVATAPFYTRTHDVEIE
HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCHH
EHFRKIHAAAPELPLFAYNIPVSVHSNLNPVMLLTLAKDGVLAGTKDSSGNDGAIRSLIE
HHHHHHHHCCCCCCEEEEECCEEECCCCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHH
ARDDAGLTERFKILTGSETTVDFAYLAGADGVVPGLGNVDPAAYAALAKLCLDGKWAEAA
HHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
ALQKRINHLFHIVFVGDTSHMSGSSAGLGGFKTALAHLGIIESNAMAVPHQSLSDEETAR
HHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHCEECCCCEECCCCCCCCHHHHH
IHAIVDEFLYTA
HHHHHHHHHHCC
>Mature Secondary Structure 
ASATFTGVIPPVMTPLHADGSVDVESLRKLVDHLINGGVDGLFALGSSGEAAFLTRTQR
CCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHH
KLALTTIIEHTAGRVPVTAGVIETTTARVIELVEDALEAGAEGLVATAPFYTRTHDVEIE
HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCHH
EHFRKIHAAAPELPLFAYNIPVSVHSNLNPVMLLTLAKDGVLAGTKDSSGNDGAIRSLIE
HHHHHHHHCCCCCCEEEEECCEEECCCCCCEEEEEEECCCEEECCCCCCCCCHHHHHHHH
ARDDAGLTERFKILTGSETTVDFAYLAGADGVVPGLGNVDPAAYAALAKLCLDGKWAEAA
HHCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
ALQKRINHLFHIVFVGDTSHMSGSSAGLGGFKTALAHLGIIESNAMAVPHQSLSDEETAR
HHHHHHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHCEECCCCEECCCCCCCCHHHHH
IHAIVDEFLYTA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA