| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296588
Identifier: 145296588
GI number: 145296588
Start: 2756140
End: 2756829
Strand: Reverse
Name: 145296588
Synonym: cgR_2496
Alternate gene names: NA
Gene position: 2756829-2756140 (Counterclockwise)
Preceding gene: 145296589
Following gene: 145296586
Centisome position: 83.18
GC content: 53.91
Gene sequence:
>690_bases ATGTCCGGCCGTCTTCTTGTTTCAGTTTCTAGTATTTTCGACCAGACCCGATCGGCGGCTGACAGGCTCATTTCAGACCT GCGAGCCGACGGCATCGAGGTCTCATTACTTGTCGCACCCCGCATCGATGGGGACTGGCGTCTCGCCAAAGACAAAGGGA CCCTCGCGTGGATGGAACAACAACGCGAACGCGGCCACGAACTCATCCTCAACGGTTTCGACCAAGCAGTTCAGGGACGT CGCTCAGAATTCGCCAACCTTGAACGGCACGAAGCACGTCTTCGCCTTACCGGTGCCATTAGGCAAATGCAGAAAATTGG CTTCGAATTCCAAATCTTTGCCCCACCTCGTTGGAGAATGTCAGAAGGCACCTTCGCGGTACTCCCAGAATTTGATTTCA ACGTCGCCGCATCGACCAGGGGATTACATAACCTCGACACCGGCGAATTCTTGGCGTGCAGAAACCTCTCCGTGGGTGAA GGCTTTGGTGCTGCAAAATGGTGGCGCAAGAATGTCATCAAGGCTGTCACTCGAGGAGCAGAAAAAGGAAATACAGTGCG ATTGTCTGCATCGGCTCGAAACCTCACTAACCCTAAAGTCGCAGCTGACTTCCGGGAAGCTGCTCTAGCTGCCTTGGATT TGGGCGCACAGGTGCAAACGTATTCTCAAGCAGCTGCACAACTGGCTTAG
Upstream 100 bases:
>100_bases TCCATGACGTTTTGAATGGAAAATCTCCATTTGTGGAGTTAGAGGAAGAGCACTAGTTTTCAACAGGACGACAACGGCCG GACATGCGACAATACAATGC
Downstream 100 bases:
>100_bases TCAGGGTGGCTCGGGGCACTCAATTGGGAGAGACCAGACAGGGCTGCCCATTTTTGGGATTTCTATCGTTGCTGGGCATC TGTGTCTGGTTTCGGCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Deacetylase-Like Protein
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSGRLLVSVSSIFDQTRSAADRLISDLRADGIEVSLLVAPRIDGDWRLAKDKGTLAWMEQQRERGHELILNGFDQAVQGR RSEFANLERHEARLRLTGAIRQMQKIGFEFQIFAPPRWRMSEGTFAVLPEFDFNVAASTRGLHNLDTGEFLACRNLSVGE GFGAAKWWRKNVIKAVTRGAEKGNTVRLSASARNLTNPKVAADFREAALAALDLGAQVQTYSQAAAQLA
Sequences:
>Translated_229_residues MSGRLLVSVSSIFDQTRSAADRLISDLRADGIEVSLLVAPRIDGDWRLAKDKGTLAWMEQQRERGHELILNGFDQAVQGR RSEFANLERHEARLRLTGAIRQMQKIGFEFQIFAPPRWRMSEGTFAVLPEFDFNVAASTRGLHNLDTGEFLACRNLSVGE GFGAAKWWRKNVIKAVTRGAEKGNTVRLSASARNLTNPKVAADFREAALAALDLGAQVQTYSQAAAQLA >Mature_228_residues SGRLLVSVSSIFDQTRSAADRLISDLRADGIEVSLLVAPRIDGDWRLAKDKGTLAWMEQQRERGHELILNGFDQAVQGRR SEFANLERHEARLRLTGAIRQMQKIGFEFQIFAPPRWRMSEGTFAVLPEFDFNVAASTRGLHNLDTGEFLACRNLSVGEG FGAAKWWRKNVIKAVTRGAEKGNTVRLSASARNLTNPKVAADFREAALAALDLGAQVQTYSQAAAQLA
Specific function: Unknown
COG id: COG3233
COG function: function code R; Predicted deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25329; Mature: 25198
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLLVSVSSIFDQTRSAADRLISDLRADGIEVSLLVAPRIDGDWRLAKDKGTLAWMEQ CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCHHHHHHH QRERGHELILNGFDQAVQGRRSEFANLERHEARLRLTGAIRQMQKIGFEFQIFAPPRWRM HHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE SEGTFAVLPEFDFNVAASTRGLHNLDTGEFLACRNLSVGEGFGAAKWWRKNVIKAVTRGA CCCCEEEECCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC EKGNTVRLSASARNLTNPKVAADFREAALAALDLGAQVQTYSQAAAQLA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure SGRLLVSVSSIFDQTRSAADRLISDLRADGIEVSLLVAPRIDGDWRLAKDKGTLAWMEQ CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCHHHHHHH QRERGHELILNGFDQAVQGRRSEFANLERHEARLRLTGAIRQMQKIGFEFQIFAPPRWRM HHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE SEGTFAVLPEFDFNVAASTRGLHNLDTGEFLACRNLSVGEGFGAAKWWRKNVIKAVTRGA CCCCEEEECCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC EKGNTVRLSASARNLTNPKVAADFREAALAALDLGAQVQTYSQAAAQLA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA