Click here to switch to the map view.

The map label for this gene is 145296545

Identifier: 145296545

GI number: 145296545

Start: 2704074

End: 2704916

Strand: Direct

Name: 145296545

Synonym: cgR_2454

Alternate gene names: NA

Gene position: 2704074-2704916 (Clockwise)

Preceding gene: 145296540

Following gene: 145296546

Centisome position: 81.59

GC content: 52.91

Gene sequence:

>843_bases
TTGTTTACTATCACTGGTTTTGCAGATGAGATCGCACATGATCTCGACGAACAGATTTCCTTACTTAATAAACTGAAGAT
CAACCACGTGGAATTCCGCAGCGCATGGGGAGCCAAAGTTCTCGATCTAACTGAAGAACAGCTCGCGGAAGCTAAAGCCA
AATTGGATGCCGCAGGAATTTCACTTTCAGCCGTTGGATCCGACTTAGGCAAGATCAACATCACCGATCCTTTCGAAGAT
CACTTGGAGCGCGCACGCCACGGTGTTGAGGTCGCTAAGCTCTTCGGCGCGAAATACATCCGCATGTTCTCCTTCTTTAT
TGCAGAAGGCGACAACCCTGAAAGCTTCCGCGAAGAAGTACTCTCCCGCACCCACGCAATGGTCGAACTCGCAGAAGCCG
GCGGCATCACCCTCCTCCACGAAAATGAAAAGGGAATCTACGGCGACTCCCCGCAGCGCGTGAAGGATCTGATCACCAGC
ATCGACTCCCCTAACTACCGCGCAATCTACGACGCAGCTAACTACGTGCAAACCGGATTCAAGCCTTTTGATGAGGCATG
GCCGATCGTTAAGGACTACGTCGACTACGTCCACATCAAGGACGCGACCATTCCAGATACAGAGCACCCCATCGGAATCA
TCAAGCCAGCAGGACAAGGCGACGGCCAATACCCAGAGCTCCTTTCCGCGCTAAACGCCGACGGATACAACGGATTCGTC
TCCATCGAGCCTCACCTGGGTGACTTCGATGAATTCGGCGGACTCTGCGGACCTGACCTATGGACCAGCGCATACGACGC
TCTCGCAGGAATCCTGAACAACATCAACGCCGAGTACAACTAA

Upstream 100 bases:

>100_bases
GTATTTAATGATCCTACCAATCCTTTAGTTTCGTCTGTAGAGTGATGTGTGACGCAATTTTTAAGACTCTAAACCCACGT
CACAAGAAATGAGGGGTGCT

Downstream 100 bases:

>100_bases
GGACAACTGATAATGACAAATGCTGCAATTGTCGGATGCGGAGATGTCGCAACCGTTCATGCAGAAGCGCTGGAAGCTTT
GGCTTCCGATCTTGGTATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; TIM Barrel Xylose Isomerase; Xylose Isomerase Domain-Containing Protein TIM Barrel; Signal Peptide

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MFTITGFADEIAHDLDEQISLLNKLKINHVEFRSAWGAKVLDLTEEQLAEAKAKLDAAGISLSAVGSDLGKINITDPFED
HLERARHGVEVAKLFGAKYIRMFSFFIAEGDNPESFREEVLSRTHAMVELAEAGGITLLHENEKGIYGDSPQRVKDLITS
IDSPNYRAIYDAANYVQTGFKPFDEAWPIVKDYVDYVHIKDATIPDTEHPIGIIKPAGQGDGQYPELLSALNADGYNGFV
SIEPHLGDFDEFGGLCGPDLWTSAYDALAGILNNINAEYN

Sequences:

>Translated_280_residues
MFTITGFADEIAHDLDEQISLLNKLKINHVEFRSAWGAKVLDLTEEQLAEAKAKLDAAGISLSAVGSDLGKINITDPFED
HLERARHGVEVAKLFGAKYIRMFSFFIAEGDNPESFREEVLSRTHAMVELAEAGGITLLHENEKGIYGDSPQRVKDLITS
IDSPNYRAIYDAANYVQTGFKPFDEAWPIVKDYVDYVHIKDATIPDTEHPIGIIKPAGQGDGQYPELLSALNADGYNGFV
SIEPHLGDFDEFGGLCGPDLWTSAYDALAGILNNINAEYN
>Mature_280_residues
MFTITGFADEIAHDLDEQISLLNKLKINHVEFRSAWGAKVLDLTEEQLAEAKAKLDAAGISLSAVGSDLGKINITDPFED
HLERARHGVEVAKLFGAKYIRMFSFFIAEGDNPESFREEVLSRTHAMVELAEAGGITLLHENEKGIYGDSPQRVKDLITS
IDSPNYRAIYDAANYVQTGFKPFDEAWPIVKDYVDYVHIKDATIPDTEHPIGIIKPAGQGDGQYPELLSALNADGYNGFV
SIEPHLGDFDEFGGLCGPDLWTSAYDALAGILNNINAEYN

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30839; Mature: 30839

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTITGFADEIAHDLDEQISLLNKLKINHVEFRSAWGAKVLDLTEEQLAEAKAKLDAAGI
CEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
SLSAVGSDLGKINITDPFEDHLERARHGVEVAKLFGAKYIRMFSFFIAEGDNPESFREEV
CHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LSRTHAMVELAEAGGITLLHENEKGIYGDSPQRVKDLITSIDSPNYRAIYDAANYVQTGF
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHCC
KPFDEAWPIVKDYVDYVHIKDATIPDTEHPIGIIKPAGQGDGQYPELLSALNADGYNGFV
CCCHHHCHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCEE
SIEPHLGDFDEFGGLCGPDLWTSAYDALAGILNNINAEYN
EECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFTITGFADEIAHDLDEQISLLNKLKINHVEFRSAWGAKVLDLTEEQLAEAKAKLDAAGI
CEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
SLSAVGSDLGKINITDPFEDHLERARHGVEVAKLFGAKYIRMFSFFIAEGDNPESFREEV
CHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LSRTHAMVELAEAGGITLLHENEKGIYGDSPQRVKDLITSIDSPNYRAIYDAANYVQTGF
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHCC
KPFDEAWPIVKDYVDYVHIKDATIPDTEHPIGIIKPAGQGDGQYPELLSALNADGYNGFV
CCCHHHCHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCEE
SIEPHLGDFDEFGGLCGPDLWTSAYDALAGILNNINAEYN
EECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA