Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 145296543

GI number: 145296543

Start: 2694314

End: 2696875

Strand: Reverse

Name: ybjZ [C]

Synonym: cgR_2452

Alternate gene names: 145296543

Gene position: 2696875-2694314 (Counterclockwise)

Preceding gene: 145296544

Following gene: 145296542

Centisome position: 81.37

GC content: 55.93

Gene sequence:

>2562_bases
ATGAATTCCGGTTCCACAATGCGCAGAATTAGTCTGCGCAATATTGGCGCGCACAAGGTCAGGCTGTTTTTGACAGTTCT
GGCCGTGGTGCTCGGCACGTCTTTTGTTTCCGGCGCGATGATGTTTACCAACGCGCTGTCCTCGACTTTCGATGAGGCTA
TTGCCAGCAGCTTTGACGGTGTGGATGTGGTGGTTTCACCAAGCGCTGGATCAGAGGTGCAGGGTGTTCCTGTTGAGACG
GTCGAATCTTTGCGTGAGGATTCCCGCATCAGCCATCTCAACATCAACGGTTCTCAGACTGTCGTCCTGGCGGATGCTGA
TTCCAAGGCGATTCAAACGACTGGGGGATCGTCGTTAAGCATTTATTACAGCGCTGACGATGCGGTTGCCCAGGCACCGG
AATTGACTGAGGGAGAGGTGCCGGCTGGCACCGAAGAGGTGCTTGCCTCCAAGGCTGGCGCTGAGGCGAATGGCCTGGGA
GTGGGGGACCAGATCCTGGTCGTGGACTCCAGTGGCCGCTATAACGTCACCATCACTGGCTTGACCACCACTGAGACGGA
TTCAGCCACCGCGCTGAACCTGCAGATGTCGGAAGCTGGCTACCTGGAGCGCTACACCGACGGGGCTACCGTCCCCAGCG
TCACGCTGTCGGCTGCAGATGACACCACGCCTCAAGAGCTTGTCGACGCCCTAGCCAACGAACTCGGATCAAACTTTGAT
GTAGAAACCGGCGAAGCGCTAGTCGAGCAGGCTACAGAAACGATCACGCAAGCCCTGAGCTTTGTGCAGTACTTCCTCGT
TGCCTTCGGTCTCATTGCACTACTGGTTGGTACCTTCATCATCGCGAATACCTTCTCCATGATTGTGGCTCAGCGCATGC
GTGAGTTCGCTCTCCTGCGAGCCCTGGGTGCAGCGCCAGGACAGATCACTCGCTCTGTGGTGCTGGAAGCAACCATCGTT
GGCCTCTTCGGTTCTGCTGTTGGTGTGCTGGGTGGTATGGGCCTCGTGGCGATTATTTCAGCTGTACTTAACAACTTGGG
AATGCCGATGGGATCCAGCGTTGGCCTGACTCCTTCTGCAGTGATCACCGCGCTCGTGTTGGGGACCGTTGTCACCATTG
TGAGCGCGTGGGCTCCGGCTCGTCGTGCAGGGGAGGTTAAGCCTGTCGAAGCGATGCGCAACCTGGAAACCACCACTATG
CGTTCCATGATGGGTCGCACGATCACCGGTGGCATCGTTCTAGCACTCGGCATCATCTTTGCGATTGCTGGTGCAATGAT
GACCGATTCCTCCACCGCCACTCGTTCCATCCTGGTGGGCATTGGTGCATTGTTTGTCATCGTGGGTACGTTCTTCTTCT
CACCGGCGCTCTCCATGCCTGTGGTGGGTGGCCTGGGCAAGGTTATCGGTGCACCGTTTGGCAGCGTTGGAAGCCTTGCT
GCGACCAACTCCAAGCGCAACCCTCGCCGTACCGCAACCACAGCGTTCGCACTCACGTTGGGCATTGCCTTGGTGACCGC
AATTGGCATGCTATCCGCAACCATGAAGGACACAGTTTCCGACATGATGGCGGAGCAGTACACAGCTGATTACATCCTGC
AGGGACCAACCAACGGCTCCATTACCATGCCGAAGGAATCTGTCAATGATGTTCGCGATGCTGAGGGCGTTGCCGATGTC
GTGATGATTTCCATGAATGCTGCGTCGGTGAACGGTCAGGCTTCGTACAGCCAGTTGGGCCAGTCTGTCACCTTTGTCGC
TGACGGCGACTTGAGCGAAGTCATCAGCACAGAAAGCATTGATGGCTCCCTCGACTTGAGTAACCCAGGTGTTGTGGCTA
GCCAGACGTTTGCTGATGAAAACGGCTGGGCAGTGGGTGATACTCTGCAGCTTGAATCAATGGGGCAGACCATCGGCGAT
ATCGAGTTGATCGGTACCTTCACTGGAAATGACGCCATCGGAGGCATGATCATTTCCGAAAGTTCCTTGGCTGATACGCC
AGCGGCAGACACTGCAGTGCCACAGATGATGCTGGTGGTAGGCGAAGAAGGCTTTGATAAGGAACAGCTGCGCACCAACT
TGGAAGACGCAGTCGCTGATTATATTGTCATCTCTGTGAAATCAGCAACTGAGTTCGCTGGTGAAACAGTCGCGATGATC
GACACCATGATGAACATTCTGTACGCACTGCTTGCACTGTCTGTCATCGTTGCTGTCATCGGCATTATCAACACCCTGGC
GCTGAACGTGATCGAGCGTCGCCAGGAGATCGGTATGCTCCGCGCAGTTGGCGTGAAGCGTGGTCAGGTCCGCACCATGA
TCACCTTGGAATCTGTTCAGATCGCCATCTACGGTGCCGTGATTGGTATCGCTATCGGTCTTGGTTTGGGCTGGGCCTTT
GTGACAGTGATGTCCGGCGAAGGCTTGAATGCTGCGGTTAGTATCCCGTGGGGTCAGGTCGGACTGATGCTTGTTGGTTC
CGCTGTAGTCGGTGTTATCGCCGCGCTGTGGCCTGCAGTGAAGGCATCTAGGACACCACCTTTGGATGCGATTACCGACT
AG

Upstream 100 bases:

>100_bases
GTGTTATTTTCTTGGCGGACGGTCGTATCGTGAACCAGTTGTTTGATCCCACCATCGAGGAAATCTTGGCCACGATGAAC
GGAATTGAGGATATTGCCTA

Downstream 100 bases:

>100_bases
GTTTCGTGGCATTTTAATCAGTTGGGGCTTTCCAGAATTTCTGGAGGGCCCCATCTTTTGTGCATTTTTCTAAGGGGCTT
CAATAGCATATTTACCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 853; Mature: 853

Protein sequence:

>853_residues
MNSGSTMRRISLRNIGAHKVRLFLTVLAVVLGTSFVSGAMMFTNALSSTFDEAIASSFDGVDVVVSPSAGSEVQGVPVET
VESLREDSRISHLNINGSQTVVLADADSKAIQTTGGSSLSIYYSADDAVAQAPELTEGEVPAGTEEVLASKAGAEANGLG
VGDQILVVDSSGRYNVTITGLTTTETDSATALNLQMSEAGYLERYTDGATVPSVTLSAADDTTPQELVDALANELGSNFD
VETGEALVEQATETITQALSFVQYFLVAFGLIALLVGTFIIANTFSMIVAQRMREFALLRALGAAPGQITRSVVLEATIV
GLFGSAVGVLGGMGLVAIISAVLNNLGMPMGSSVGLTPSAVITALVLGTVVTIVSAWAPARRAGEVKPVEAMRNLETTTM
RSMMGRTITGGIVLALGIIFAIAGAMMTDSSTATRSILVGIGALFVIVGTFFFSPALSMPVVGGLGKVIGAPFGSVGSLA
ATNSKRNPRRTATTAFALTLGIALVTAIGMLSATMKDTVSDMMAEQYTADYILQGPTNGSITMPKESVNDVRDAEGVADV
VMISMNAASVNGQASYSQLGQSVTFVADGDLSEVISTESIDGSLDLSNPGVVASQTFADENGWAVGDTLQLESMGQTIGD
IELIGTFTGNDAIGGMIISESSLADTPAADTAVPQMMLVVGEEGFDKEQLRTNLEDAVADYIVISVKSATEFAGETVAMI
DTMMNILYALLALSVIVAVIGIINTLALNVIERRQEIGMLRAVGVKRGQVRTMITLESVQIAIYGAVIGIAIGLGLGWAF
VTVMSGEGLNAAVSIPWGQVGLMLVGSAVVGVIAALWPAVKASRTPPLDAITD

Sequences:

>Translated_853_residues
MNSGSTMRRISLRNIGAHKVRLFLTVLAVVLGTSFVSGAMMFTNALSSTFDEAIASSFDGVDVVVSPSAGSEVQGVPVET
VESLREDSRISHLNINGSQTVVLADADSKAIQTTGGSSLSIYYSADDAVAQAPELTEGEVPAGTEEVLASKAGAEANGLG
VGDQILVVDSSGRYNVTITGLTTTETDSATALNLQMSEAGYLERYTDGATVPSVTLSAADDTTPQELVDALANELGSNFD
VETGEALVEQATETITQALSFVQYFLVAFGLIALLVGTFIIANTFSMIVAQRMREFALLRALGAAPGQITRSVVLEATIV
GLFGSAVGVLGGMGLVAIISAVLNNLGMPMGSSVGLTPSAVITALVLGTVVTIVSAWAPARRAGEVKPVEAMRNLETTTM
RSMMGRTITGGIVLALGIIFAIAGAMMTDSSTATRSILVGIGALFVIVGTFFFSPALSMPVVGGLGKVIGAPFGSVGSLA
ATNSKRNPRRTATTAFALTLGIALVTAIGMLSATMKDTVSDMMAEQYTADYILQGPTNGSITMPKESVNDVRDAEGVADV
VMISMNAASVNGQASYSQLGQSVTFVADGDLSEVISTESIDGSLDLSNPGVVASQTFADENGWAVGDTLQLESMGQTIGD
IELIGTFTGNDAIGGMIISESSLADTPAADTAVPQMMLVVGEEGFDKEQLRTNLEDAVADYIVISVKSATEFAGETVAMI
DTMMNILYALLALSVIVAVIGIINTLALNVIERRQEIGMLRAVGVKRGQVRTMITLESVQIAIYGAVIGIAIGLGLGWAF
VTVMSGEGLNAAVSIPWGQVGLMLVGSAVVGVIAALWPAVKASRTPPLDAITD
>Mature_853_residues
MNSGSTMRRISLRNIGAHKVRLFLTVLAVVLGTSFVSGAMMFTNALSSTFDEAIASSFDGVDVVVSPSAGSEVQGVPVET
VESLREDSRISHLNINGSQTVVLADADSKAIQTTGGSSLSIYYSADDAVAQAPELTEGEVPAGTEEVLASKAGAEANGLG
VGDQILVVDSSGRYNVTITGLTTTETDSATALNLQMSEAGYLERYTDGATVPSVTLSAADDTTPQELVDALANELGSNFD
VETGEALVEQATETITQALSFVQYFLVAFGLIALLVGTFIIANTFSMIVAQRMREFALLRALGAAPGQITRSVVLEATIV
GLFGSAVGVLGGMGLVAIISAVLNNLGMPMGSSVGLTPSAVITALVLGTVVTIVSAWAPARRAGEVKPVEAMRNLETTTM
RSMMGRTITGGIVLALGIIFAIAGAMMTDSSTATRSILVGIGALFVIVGTFFFSPALSMPVVGGLGKVIGAPFGSVGSLA
ATNSKRNPRRTATTAFALTLGIALVTAIGMLSATMKDTVSDMMAEQYTADYILQGPTNGSITMPKESVNDVRDAEGVADV
VMISMNAASVNGQASYSQLGQSVTFVADGDLSEVISTESIDGSLDLSNPGVVASQTFADENGWAVGDTLQLESMGQTIGD
IELIGTFTGNDAIGGMIISESSLADTPAADTAVPQMMLVVGEEGFDKEQLRTNLEDAVADYIVISVKSATEFAGETVAMI
DTMMNILYALLALSVIVAVIGIINTLALNVIERRQEIGMLRAVGVKRGQVRTMITLESVQIAIYGAVIGIAIGLGLGWAF
VTVMSGEGLNAAVSIPWGQVGLMLVGSAVVGVIAALWPAVKASRTPPLDAITD

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=140, Percent_Identity=30, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 87967; Mature: 87967

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSGSTMRRISLRNIGAHKVRLFLTVLAVVLGTSFVSGAMMFTNALSSTFDEAIASSFDG
CCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VDVVVSPSAGSEVQGVPVETVESLREDSRISHLNINGSQTVVLADADSKAIQTTGGSSLS
CEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCEEEECCCCEEE
IYYSADDAVAQAPELTEGEVPAGTEEVLASKAGAEANGLGVGDQILVVDSSGRYNVTITG
EEECCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEE
LTTTETDSATALNLQMSEAGYLERYTDGATVPSVTLSAADDTTPQELVDALANELGSNFD
EEECCCCCCEEEEEEECCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC
VETGEALVEQATETITQALSFVQYFLVAFGLIALLVGTFIIANTFSMIVAQRMREFALLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGAAPGQITRSVVLEATIVGLFGSAVGVLGGMGLVAIISAVLNNLGMPMGSSVGLTPSA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VITALVLGTVVTIVSAWAPARRAGEVKPVEAMRNLETTTMRSMMGRTITGGIVLALGIIF
HHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHH
AIAGAMMTDSSTATRSILVGIGALFVIVGTFFFSPALSMPVVGGLGKVIGAPFGSVGSLA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCCCCC
ATNSKRNPRRTATTAFALTLGIALVTAIGMLSATMKDTVSDMMAEQYTADYILQGPTNGS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
ITMPKESVNDVRDAEGVADVVMISMNAASVNGQASYSQLGQSVTFVADGDLSEVISTESI
EECCHHHHHHHHHHCCHHEEEEEEECCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHCCC
DGSLDLSNPGVVASQTFADENGWAVGDTLQLESMGQTIGDIELIGTFTGNDAIGGMIISE
CCCEECCCCCCEEECCCCCCCCEEECCEEEHHHHCCCCCCEEEEEEECCCCCCCCEEEEC
SSLADTPAADTAVPQMMLVVGEEGFDKEQLRTNLEDAVADYIVISVKSATEFAGETVAMI
CCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCEEEEEECCHHHHCCCHHHHH
DTMMNILYALLALSVIVAVIGIINTLALNVIERRQEIGMLRAVGVKRGQVRTMITLESVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHH
IAIYGAVIGIAIGLGLGWAFVTVMSGEGLNAAVSIPWGQVGLMLVGSAVVGVIAALWPAV
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
KASRTPPLDAITD
HCCCCCCCCCCCC
>Mature Secondary Structure
MNSGSTMRRISLRNIGAHKVRLFLTVLAVVLGTSFVSGAMMFTNALSSTFDEAIASSFDG
CCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VDVVVSPSAGSEVQGVPVETVESLREDSRISHLNINGSQTVVLADADSKAIQTTGGSSLS
CEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCEEEECCCCEEE
IYYSADDAVAQAPELTEGEVPAGTEEVLASKAGAEANGLGVGDQILVVDSSGRYNVTITG
EEECCCHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEE
LTTTETDSATALNLQMSEAGYLERYTDGATVPSVTLSAADDTTPQELVDALANELGSNFD
EEECCCCCCEEEEEEECCCCCHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCC
VETGEALVEQATETITQALSFVQYFLVAFGLIALLVGTFIIANTFSMIVAQRMREFALLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGAAPGQITRSVVLEATIVGLFGSAVGVLGGMGLVAIISAVLNNLGMPMGSSVGLTPSA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VITALVLGTVVTIVSAWAPARRAGEVKPVEAMRNLETTTMRSMMGRTITGGIVLALGIIF
HHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHH
AIAGAMMTDSSTATRSILVGIGALFVIVGTFFFSPALSMPVVGGLGKVIGAPFGSVGSLA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCCCCCCCCCC
ATNSKRNPRRTATTAFALTLGIALVTAIGMLSATMKDTVSDMMAEQYTADYILQGPTNGS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
ITMPKESVNDVRDAEGVADVVMISMNAASVNGQASYSQLGQSVTFVADGDLSEVISTESI
EECCHHHHHHHHHHCCHHEEEEEEECCCCCCCCCHHHHHCCEEEEEECCCHHHHHHHCCC
DGSLDLSNPGVVASQTFADENGWAVGDTLQLESMGQTIGDIELIGTFTGNDAIGGMIISE
CCCEECCCCCCEEECCCCCCCCEEECCEEEHHHHCCCCCCEEEEEEECCCCCCCCEEEEC
SSLADTPAADTAVPQMMLVVGEEGFDKEQLRTNLEDAVADYIVISVKSATEFAGETVAMI
CCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCEEEEEECCHHHHCCCHHHHH
DTMMNILYALLALSVIVAVIGIINTLALNVIERRQEIGMLRAVGVKRGQVRTMITLESVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHH
IAIYGAVIGIAIGLGLGWAFVTVMSGEGLNAAVSIPWGQVGLMLVGSAVVGVIAALWPAV
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
KASRTPPLDAITD
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]