| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is ftnA [H]
Identifier: 145296523
GI number: 145296523
Start: 2675951
End: 2676439
Strand: Direct
Name: ftnA [H]
Synonym: cgR_2433
Alternate gene names: 145296523
Gene position: 2675951-2676439 (Clockwise)
Preceding gene: 145296519
Following gene: 145296524
Centisome position: 80.74
GC content: 56.03
Gene sequence:
>489_bases ATGACAATCAACGAGAAGATCGCATCAGCTTTCAACAACCAAGTGACTGCAGAGCTTGAAGCTTCAATGGTGTACCTTCA GCTCTCCTACGTTCTAGACGATCTGGGCCTCACCGGCATGCGCGACTGGATGAAGGCACAGAGCAAAGAAGAGCTCGAAC ACGCACAGAAGTTCGCTCAGCACCTTCTTGACCGTGACTACACCCCACAGATCGGTGACATTGCACCACCAAAGCTTGAT GTCACCTCCGCTATCGAGGCTTTCGAGGCTTCCCTGGCACACGAGCAGAAGATCTCCGGCCTGATCCGCGAGCTCGCTGC TATCCAGGACGCTGAGAAGGACTACGATTCCCGCGCACTGATCGACTGGTTCCTCAACGAGCAGATCGAAGAAGAAGCAA CCGTCGGCGAGATCATCGACCGCCTCCGCATCGCTGGTGACTCCGGTTCCGGAATCCTGCGCATCGACGACGAACTCGGC TCCCGCTAA
Upstream 100 bases:
>100_bases AAAAAGGTGGGAAACTTAGCCAATCCAAAGCCCAAAAATGCGGGTTATGCTGCGCTAACCTATGCTGACAGCCTTGCGGA ATTTGTGTACGTTAGGGGCC
Downstream 100 bases:
>100_bases ATTCCCCGCAGTTTTTAATGCTCCACTCCCCCACTAAAGGGGAGGGGAGCATTTTTTATTCTCTAGGTATTCCCTTAATT AGTGCTCTTTTCCAAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTINEKIASAFNNQVTAELEASMVYLQLSYVLDDLGLTGMRDWMKAQSKEELEHAQKFAQHLLDRDYTPQIGDIAPPKLD VTSAIEAFEASLAHEQKISGLIRELAAIQDAEKDYDSRALIDWFLNEQIEEEATVGEIIDRLRIAGDSGSGILRIDDELG SR
Sequences:
>Translated_162_residues MTINEKIASAFNNQVTAELEASMVYLQLSYVLDDLGLTGMRDWMKAQSKEELEHAQKFAQHLLDRDYTPQIGDIAPPKLD VTSAIEAFEASLAHEQKISGLIRELAAIQDAEKDYDSRALIDWFLNEQIEEEATVGEIIDRLRIAGDSGSGILRIDDELG SR >Mature_161_residues TINEKIASAFNNQVTAELEASMVYLQLSYVLDDLGLTGMRDWMKAQSKEELEHAQKFAQHLLDRDYTPQIGDIAPPKLDV TSAIEAFEASLAHEQKISGLIRELAAIQDAEKDYDSRALIDWFLNEQIEEEATVGEIIDRLRIAGDSGSGILRIDDELGS R
Specific function: May alleviate iron toxicity in the presence of oxygen [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=150, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 18124; Mature: 17993
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINEKIASAFNNQVTAELEASMVYLQLSYVLDDLGLTGMRDWMKAQSKEELEHAQKFAQ CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH HLLDRDYTPQIGDIAPPKLDVTSAIEAFEASLAHEQKISGLIRELAAIQDAEKDYDSRAL HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IDWFLNEQIEEEATVGEIIDRLRIAGDSGSGILRIDDELGSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC >Mature Secondary Structure TINEKIASAFNNQVTAELEASMVYLQLSYVLDDLGLTGMRDWMKAQSKEELEHAQKFAQ CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH HLLDRDYTPQIGDIAPPKLDVTSAIEAFEASLAHEQKISGLIRELAAIQDAEKDYDSRAL HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IDWFLNEQIEEEATVGEIIDRLRIAGDSGSGILRIDDELGSR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA