| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296517
Identifier: 145296517
GI number: 145296517
Start: 2669014
End: 2669907
Strand: Reverse
Name: 145296517
Synonym: cgR_2428
Alternate gene names: NA
Gene position: 2669907-2669014 (Counterclockwise)
Preceding gene: 145296518
Following gene: 145296512
Centisome position: 80.56
GC content: 52.91
Gene sequence:
>894_bases ATGACAAGCCCTTATGGATCGCAATACCCAGGCGACGACAACAATAATTGGAACTCCCAGTTCGGCAACCTTTCCGGCGA GCAGAACTACGGTCAGCCCTACGGTGCGCCATATGGACAGCCTTACGGGCAGCCATTTGATCAAGGATTCAACGCCTACA GCTCTCCCATACCACCTGAGGTCCCACAGCCTTCCATGCAGGAGGCTCAGTGGCGCTCTTTTGACCTTGGGACTGTTTTT GGTCAGGCCTGGAAGGGCTTTGCCGCAACGTGGCAGGCGTGGGTGCTGTCCACGCTGATCTATTTCGCGGTGATACTTGT GTTGATGTTTGCGTGGATCATCCCGATGGTTGGTGTGCTCGCAGCGACCTCATCTGGTTCTGATTCCGCAGCTATTGCAG CGGCGGGTGGCACCAGCTTCTTCGGGTTCGTGCTGATGATTGTCCTGGTATTCATCAGTTTTGTATACTCCCTTAACTGC TACCGCAATGCGGCCCGAGTTGTGCGCGGTGAGCAGATCACCATTCAGAGTTTCTTCAAGATGAAGGGCCTTGGTAAGGC GCTCGGTATTTACATCTTGGTTAATATTGTCATCTTTATAGGAATGATCTTGCTGCTCATTCCTGGAATCATCGCTGCTG TGGTGCTGGTCTTTGCTGTTCCTGTGGCATTCCAGCTGCGTGATGCTTCGATCGGTGATGCGTTTTCCGCCAGCTGGAAA GTAGTGTCCAAAAACGTTGGCCAGACCATTCTGTTGTTCCTGGTTATCTTCGTGTTGAGCTTCTTAGGCAGCGCAGTGAT CATCGGTATGTTGGTGACCACTCCGCTTACATTCCTGCTGTACGCCTACGCATTCCAGACCGCCAGCGGTGGTCCCATTA TGCAGCGTCAGTAG
Upstream 100 bases:
>100_bases CGTGACGGTTGTTGCAATTCCATAACTAAACAAGCTTTGATTAACAAGTCCCTGTATTGTGTAAATCGCTTATTGCACAC AATTGAAAAAGGACATTGTT
Downstream 100 bases:
>100_bases CAGTTAGTTTTACTTAGCCACCAACCGCTTGAGTGCCGCACGTACGGTCTCTGGGTTGGTGGTTTCCCAAAATCTGGGCA TGGAGGAGCGCAGGAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTSPYGSQYPGDDNNNWNSQFGNLSGEQNYGQPYGAPYGQPYGQPFDQGFNAYSSPIPPEVPQPSMQEAQWRSFDLGTVF GQAWKGFAATWQAWVLSTLIYFAVILVLMFAWIIPMVGVLAATSSGSDSAAIAAAGGTSFFGFVLMIVLVFISFVYSLNC YRNAARVVRGEQITIQSFFKMKGLGKALGIYILVNIVIFIGMILLLIPGIIAAVVLVFAVPVAFQLRDASIGDAFSASWK VVSKNVGQTILLFLVIFVLSFLGSAVIIGMLVTTPLTFLLYAYAFQTASGGPIMQRQ
Sequences:
>Translated_297_residues MTSPYGSQYPGDDNNNWNSQFGNLSGEQNYGQPYGAPYGQPYGQPFDQGFNAYSSPIPPEVPQPSMQEAQWRSFDLGTVF GQAWKGFAATWQAWVLSTLIYFAVILVLMFAWIIPMVGVLAATSSGSDSAAIAAAGGTSFFGFVLMIVLVFISFVYSLNC YRNAARVVRGEQITIQSFFKMKGLGKALGIYILVNIVIFIGMILLLIPGIIAAVVLVFAVPVAFQLRDASIGDAFSASWK VVSKNVGQTILLFLVIFVLSFLGSAVIIGMLVTTPLTFLLYAYAFQTASGGPIMQRQ >Mature_296_residues TSPYGSQYPGDDNNNWNSQFGNLSGEQNYGQPYGAPYGQPYGQPFDQGFNAYSSPIPPEVPQPSMQEAQWRSFDLGTVFG QAWKGFAATWQAWVLSTLIYFAVILVLMFAWIIPMVGVLAATSSGSDSAAIAAAGGTSFFGFVLMIVLVFISFVYSLNCY RNAARVVRGEQITIQSFFKMKGLGKALGIYILVNIVIFIGMILLLIPGIIAAVVLVFAVPVAFQLRDASIGDAFSASWKV VSKNVGQTILLFLVIFVLSFLGSAVIIGMLVTTPLTFLLYAYAFQTASGGPIMQRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32182; Mature: 32051
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPYGSQYPGDDNNNWNSQFGNLSGEQNYGQPYGAPYGQPYGQPFDQGFNAYSSPIPPE CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC VPQPSMQEAQWRSFDLGTVFGQAWKGFAATWQAWVLSTLIYFAVILVLMFAWIIPMVGVL CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATSSGSDSAAIAAAGGTSFFGFVLMIVLVFISFVYSLNCYRNAARVVRGEQITIQSFFK HHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH MKGLGKALGIYILVNIVIFIGMILLLIPGIIAAVVLVFAVPVAFQLRDASIGDAFSASWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VVSKNVGQTILLFLVIFVLSFLGSAVIIGMLVTTPLTFLLYAYAFQTASGGPIMQRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TSPYGSQYPGDDNNNWNSQFGNLSGEQNYGQPYGAPYGQPYGQPFDQGFNAYSSPIPPE CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC VPQPSMQEAQWRSFDLGTVFGQAWKGFAATWQAWVLSTLIYFAVILVLMFAWIIPMVGVL CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATSSGSDSAAIAAAGGTSFFGFVLMIVLVFISFVYSLNCYRNAARVVRGEQITIQSFFK HHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH MKGLGKALGIYILVNIVIFIGMILLLIPGIIAAVVLVFAVPVAFQLRDASIGDAFSASWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH VVSKNVGQTILLFLVIFVLSFLGSAVIIGMLVTTPLTFLLYAYAFQTASGGPIMQRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA