BacMap

Definition	Corynebacterium glutamicum R chromosome, complete genome.
Accession	NC_009342
Length	3,314,179

Click here to switch to the map view.

The map label for this gene is fabG [H]

Identifier: 145296417

GI number: 145296417

Start: 2565222

End: 2566046

Strand: Direct

Name: fabG [H]

Synonym: cgR_2331

Alternate gene names: 145296417

Gene position: 2565222-2566046 (Clockwise)

Preceding gene: 145296416

Following gene: 145296418

Centisome position: 77.4

GC content: 51.88

Gene sequence:

>825_bases
ATGCGTAGTTCTAAAGATTCGGAGGACAATGTGGAAAAAGTAGTAAGACCGGTTGCTCTTGTCACCGGCGGCCGGCAGGG
CCTTGGATTAGGCGCGGCTAAAGGATTGGCTCTCCGAGGGTTTGACGTAGCCATCGTTGATCTTCCTGAGCCTGACCAAG
CCACGGATTTAGTTCTTAACGAACTGAGAAAACTCGGAGCGACAACTCGTTATTATCAACTGGACATTTCTGAGGTTGAA
CGACATCAAGAGATCATTGATCAAATATGGGAAGATTTCGGACGTCTTGATTGTCTCCACAATAACGCTGGCATCGCGGC
ACGACCGTTGACGGATATTTTACAGCTCACACCTGACGCCTTTGATCGAGCTGTAGATATCAACCTGCGAGGGACCTTCT
TTCTAAGCCAGACAGTGGCTAACCGCATGGTAGAAGACCCTGATCGGTTCTCGGACGGAATCTACCGCTCCATTATCATA
GTGACCTCCATAGCAGCAGAACTCGTCTCCCCTGACCGTGCGCAGTACAACATCACCAAAGCGGGGCTCTCCATGCTCAC
TAAAATCCTGGCCTACCGTTTAGGGCCTGAAGGAATAGCAGTGCACGAAATCCGGCCCGGTTTCATGCACACAGCAATGA
CAGCCTCCGCAGGATCCCCTGAGATAGAAGCTGCCATCGCTGATGGACGAGTGCCGCTGTCGAGGTGGGGAAATCCTGAT
GATATAAGCACTGCTGTAGGAACGTTGGCTTCGGGTGACCTCCCTTATATGACCGGACAACCCATCTGGATCGCGGGGGG
ATTGAACGTCGTCAAAGCAACCTGA

Upstream 100 bases:

>100_bases
TGGCCCCCGGCCAGGCACAATTCCCCTTCTAACAGACCACGGGAAAGAAAAGAAGACAGAGTAGCAGCTTAAATCCAGCG
GTGAAGCAAAACAGGCGAAC

Downstream 100 bases:

>100_bases
AAACCCTGTTGTAGATATTCAAAGGAAACAGATGGAAAACAACATGAATGGCCAGACCGCAATCGTCACAGGCGCTGCAG
GCGGCATAGGAAGCGCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRSSKDSEDNVEKVVRPVALVTGGRQGLGLGAAKGLALRGFDVAIVDLPEPDQATDLVLNELRKLGATTRYYQLDISEVE
RHQEIIDQIWEDFGRLDCLHNNAGIAARPLTDILQLTPDAFDRAVDINLRGTFFLSQTVANRMVEDPDRFSDGIYRSIII
VTSIAAELVSPDRAQYNITKAGLSMLTKILAYRLGPEGIAVHEIRPGFMHTAMTASAGSPEIEAAIADGRVPLSRWGNPD
DISTAVGTLASGDLPYMTGQPIWIAGGLNVVKAT

Sequences:

>Translated_274_residues
MRSSKDSEDNVEKVVRPVALVTGGRQGLGLGAAKGLALRGFDVAIVDLPEPDQATDLVLNELRKLGATTRYYQLDISEVE
RHQEIIDQIWEDFGRLDCLHNNAGIAARPLTDILQLTPDAFDRAVDINLRGTFFLSQTVANRMVEDPDRFSDGIYRSIII
VTSIAAELVSPDRAQYNITKAGLSMLTKILAYRLGPEGIAVHEIRPGFMHTAMTASAGSPEIEAAIADGRVPLSRWGNPD
DISTAVGTLASGDLPYMTGQPIWIAGGLNVVKAT
>Mature_274_residues
MRSSKDSEDNVEKVVRPVALVTGGRQGLGLGAAKGLALRGFDVAIVDLPEPDQATDLVLNELRKLGATTRYYQLDISEVE
RHQEIIDQIWEDFGRLDCLHNNAGIAARPLTDILQLTPDAFDRAVDINLRGTFFLSQTVANRMVEDPDRFSDGIYRSIII
VTSIAAELVSPDRAQYNITKAGLSMLTKILAYRLGPEGIAVHEIRPGFMHTAMTASAGSPEIEAAIADGRVPLSRWGNPD
DISTAVGTLASGDLPYMTGQPIWIAGGLNVVKAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=30.3501945525292, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=31.7829457364341, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=28.2868525896414, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=28.1124497991968, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=29.8449612403101, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI40254992, Length=257, Percent_Identity=24.5136186770428, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=29.0196078431373, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI5031737, Length=268, Percent_Identity=26.1194029850746, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=26.4591439688716, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI59889578, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=25.3968253968254, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=29.2, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787335, Length=255, Percent_Identity=28.6274509803922, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI2367175, Length=258, Percent_Identity=31.7829457364341, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87082100, Length=263, Percent_Identity=29.277566539924, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=31.6, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=27.3809523809524, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=29.5275590551181, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789057, Length=265, Percent_Identity=29.4339622641509, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=31.0756972111554, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789378, Length=252, Percent_Identity=28.1746031746032, Blast_Score=84, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=265, Percent_Identity=29.0566037735849, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=28.0632411067194, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17555706, Length=256, Percent_Identity=29.296875, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=26.1904761904762, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=271, Percent_Identity=29.1512915129151, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=30.6772908366534, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=259, Percent_Identity=29.3436293436293, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=263, Percent_Identity=25.8555133079848, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17508651, Length=263, Percent_Identity=27.3764258555133, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=273, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=258, Percent_Identity=23.6434108527132, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=281, Percent_Identity=26.6903914590747, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=207, Percent_Identity=26.5700483091787, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=279, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=270, Percent_Identity=28.5185185185185, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=274, Percent_Identity=27.7372262773723, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=269, Percent_Identity=27.1375464684015, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=256, Percent_Identity=25.78125, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=279, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=27.2388059701493, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=267, Percent_Identity=27.3408239700375, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17561272, Length=243, Percent_Identity=24.2798353909465, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=29.0196078431373, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6322861, Length=260, Percent_Identity=29.2307692307692, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355319, Length=259, Percent_Identity=28.1853281853282, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=29.1338582677165, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=31.496062992126, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=27.4509803921569, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28571526, Length=254, Percent_Identity=27.5590551181102, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI17737361, Length=262, Percent_Identity=29.7709923664122, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=26.8482490272374, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644339, Length=262, Percent_Identity=24.8091603053435, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24644337, Length=238, Percent_Identity=27.3109243697479, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 29653; Mature: 29653

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSKDSEDNVEKVVRPVALVTGGRQGLGLGAAKGLALRGFDVAIVDLPEPDQATDLVLN
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCEEEEEECCCCCHHHHHHHH
ELRKLGATTRYYQLDISEVERHQEIIDQIWEDFGRLDCLHNNAGIAARPLTDILQLTPDA
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCHHH
FDRAVDINLRGTFFLSQTVANRMVEDPDRFSDGIYRSIIIVTSIAAELVSPDRAQYNITK
HCCEEEEEECEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
AGLSMLTKILAYRLGPEGIAVHEIRPGFMHTAMTASAGSPEIEAAIADGRVPLSRWGNPD
HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCCH
DISTAVGTLASGDLPYMTGQPIWIAGGLNVVKAT
HHHHHHHHHCCCCCCCCCCCCEEEECCCEEEECC
>Mature Secondary Structure
MRSSKDSEDNVEKVVRPVALVTGGRQGLGLGAAKGLALRGFDVAIVDLPEPDQATDLVLN
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCEEEECCEEEEEECCCCCHHHHHHHH
ELRKLGATTRYYQLDISEVERHQEIIDQIWEDFGRLDCLHNNAGIAARPLTDILQLTPDA
HHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCHHH
FDRAVDINLRGTFFLSQTVANRMVEDPDRFSDGIYRSIIIVTSIAAELVSPDRAQYNITK
HCCEEEEEECEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
AGLSMLTKILAYRLGPEGIAVHEIRPGFMHTAMTASAGSPEIEAAIADGRVPLSRWGNPD
HHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCCH
DISTAVGTLASGDLPYMTGQPIWIAGGLNVVKAT
HHHHHHHHHCCCCCCCCCCCCEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA