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The map label for this gene is rpiB [H]

Identifier: 145296404

GI number: 145296404

Start: 2550437

End: 2550910

Strand: Reverse

Name: rpiB [H]

Synonym: cgR_2318

Alternate gene names: 145296404

Gene position: 2550910-2550437 (Counterclockwise)

Preceding gene: 145296405

Following gene: 145296401

Centisome position: 76.97

GC content: 57.17

Gene sequence:

>474_bases
ATGCGCGTATACCTTGGAGCAGACCACGCTGGTTTCGAAACTAAAAATGCAATCGCAGAACACCTTAAGGCCCACGGCCA
CGAAGTGATCGACTGCGGAGCCCACACCTATGATGCAGAAGATGACTACCCAGCCTTCTGCATCGAAGCAGCTAGCCGCA
CCGTAAACGACCCAGGCTCACTCGGCATCGTCCTGGGTGGATCCGGAAACGGCGAGCAGATCGCCGCCAACAAGGTCAAG
GGTGCACGTTGTGCACTTGCTTGGTCTGTTGAAACTGCACGCCTCGCCCGCGAGCACAACAATGCGAACCTCATCGGTAT
CGGCGGCCGCATGCACTCAGAGGAAGAGGCATTGGCAATTGTCGACGCCTTCCTCGAGCAGGAATGGAGCAACGCCGAGC
GCCACCAGCGTCGTATCGACATCCTCGCTGATTACGAGCGCACTGGAATCGCACCTGTCGTTCCTAACGAATAA

Upstream 100 bases:

>100_bases
CCAAGATTGAGTCGAGCTATTTTGCGATTTGTGAACCCCCAAATAGGGGAAAAGTCCGGGTATCCGCCGTTGTGAAAATG
CCTGCAGTAAACTAACTTCC

Downstream 100 bases:

>100_bases
ACAATTAAAAATGGGCGGTTAAGTTCTTTTCCAAGAACTTAACCGCCCATTTTGTGTTTATGTGGGGATTATTTTGGGCT
AGAAATCGAAGTCAAAATCG

Product: ribose-5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRVYLGADHAGFETKNAIAEHLKAHGHEVIDCGAHTYDAEDDYPAFCIEAASRTVNDPGSLGIVLGGSGNGEQIAANKVK
GARCALAWSVETARLAREHNNANLIGIGGRMHSEEEALAIVDAFLEQEWSNAERHQRRIDILADYERTGIAPVVPNE

Sequences:

>Translated_157_residues
MRVYLGADHAGFETKNAIAEHLKAHGHEVIDCGAHTYDAEDDYPAFCIEAASRTVNDPGSLGIVLGGSGNGEQIAANKVK
GARCALAWSVETARLAREHNNANLIGIGGRMHSEEEALAIVDAFLEQEWSNAERHQRRIDILADYERTGIAPVVPNE
>Mature_157_residues
MRVYLGADHAGFETKNAIAEHLKAHGHEVIDCGAHTYDAEDDYPAFCIEAASRTVNDPGSLGIVLGGSGNGEQIAANKVK
GARCALAWSVETARLAREHNNANLIGIGGRMHSEEEALAIVDAFLEQEWSNAERHQRRIDILADYERTGIAPVVPNE

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=147, Percent_Identity=36.0544217687075, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011860
- InterPro:   IPR003500 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 16988; Mature: 16988

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVYLGADHAGFETKNAIAEHLKAHGHEVIDCGAHTYDAEDDYPAFCIEAASRTVNDPGS
CEEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCC
LGIVLGGSGNGEQIAANKVKGARCALAWSVETARLAREHNNANLIGIGGRMHSEEEALAI
EEEEECCCCCCCEEECCCCCCCEEEEEECHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
VDAFLEQEWSNAERHQRRIDILADYERTGIAPVVPNE
HHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRVYLGADHAGFETKNAIAEHLKAHGHEVIDCGAHTYDAEDDYPAFCIEAASRTVNDPGS
CEEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCC
LGIVLGGSGNGEQIAANKVKGARCALAWSVETARLAREHNNANLIGIGGRMHSEEEALAI
EEEEECCCCCCCEEECCCCCCCEEEEEECHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
VDAFLEQEWSNAERHQRRIDILADYERTGIAPVVPNE
HHHHHHHHCCCHHHHHHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]