| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pcaG [H]
Identifier: 145296364
GI number: 145296364
Start: 2509953
End: 2510567
Strand: Reverse
Name: pcaG [H]
Synonym: cgR_2279
Alternate gene names: 145296364
Gene position: 2510567-2509953 (Counterclockwise)
Preceding gene: 145296365
Following gene: 145296363
Centisome position: 75.75
GC content: 56.26
Gene sequence:
>615_bases ATGATTGATACAGGGAAGAACGGCGAGTTCCGCTACGAGCAGTCGAATATCATCGATCAGAACGAAGCCGAGTTCGGCAT CACTCCTTCACAGACTGTGGGTCCTTACGTCCACATCGGTTTGACCCTTGAAGGTGCGGAGCATCTCGTGGAGCCAGGTT CGGAAGGTGCGGTGTCCTTTACTGTTTCCGCAACTGACGGCAATGGCGACCCCATCGCGGATGCCATGTTTGAACTGTGG CAGGCCGATCCAGAAGGCATCCACAACTCTGATTTGGATCCAAACCGCACAGCACCAGCAACCGCAGATGGCTTCCGCGG GCTTGGTCGCGCGATGGCAAACGCGCAGGGTGAGGCAACGTTCACCACTTTGGTTCCGGGAGCATTCGCAGATGAGGCAC CACACTTCAAGGTTGGTGTGTTCGCCCGTGGCATGCTGGAGCGTCTGTACACTCGCGCATACCTGCCAGACGCCGATTTG AGCACCGACCCAGTTTTGGCTGTGGTCCCAGCTGATCGACGTGACCTCCTGGTAGCTCAGAAGACCGATGATGGCTTCCG CTTCGACATCACTGTCCAGGCTGAAGACAACGAAACCCCATTTTTTGGACTCTAA
Upstream 100 bases:
>100_bases TCGACTATGACGAGACCCGTGAAAACTTCGCGCTTGGTTACAAGTTCGACATCGTCCTTCGTGGCCGCAACGCCACCCCA TTCGAGTAAAGGGTTTTGCA
Downstream 100 bases:
>100_bases ATTGACCCGATCTTTATACTCCGACCTTGCTGGTAGTGGAGAACACCTCAGCAGCCTTTCCGACGAGACTTTCCTAAAGA ATCTTCTTGTCGTGGAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: 3,4-PCD [H]
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MIDTGKNGEFRYEQSNIIDQNEAEFGITPSQTVGPYVHIGLTLEGAEHLVEPGSEGAVSFTVSATDGNGDPIADAMFELW QADPEGIHNSDLDPNRTAPATADGFRGLGRAMANAQGEATFTTLVPGAFADEAPHFKVGVFARGMLERLYTRAYLPDADL STDPVLAVVPADRRDLLVAQKTDDGFRFDITVQAEDNETPFFGL
Sequences:
>Translated_204_residues MIDTGKNGEFRYEQSNIIDQNEAEFGITPSQTVGPYVHIGLTLEGAEHLVEPGSEGAVSFTVSATDGNGDPIADAMFELW QADPEGIHNSDLDPNRTAPATADGFRGLGRAMANAQGEATFTTLVPGAFADEAPHFKVGVFARGMLERLYTRAYLPDADL STDPVLAVVPADRRDLLVAQKTDDGFRFDITVQAEDNETPFFGL >Mature_204_residues MIDTGKNGEFRYEQSNIIDQNEAEFGITPSQTVGPYVHIGLTLEGAEHLVEPGSEGAVSFTVSATDGNGDPIADAMFELW QADPEGIHNSDLDPNRTAPATADGFRGLGRAMANAQGEATFTTLVPGAFADEAPHFKVGVFARGMLERLYTRAYLPDADL STDPVLAVVPADRRDLLVAQKTDDGFRFDITVQAEDNETPFFGL
Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000627 - InterPro: IPR015889 - InterPro: IPR012786 [H]
Pfam domain/function: PF00775 Dioxygenase_C [H]
EC number: =1.13.11.3 [H]
Molecular weight: Translated: 21951; Mature: 21951
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTGKNGEFRYEQSNIIDQNEAEFGITPSQTVGPYVHIGLTLEGAEHLVEPGSEGAVSF CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCEEE TVSATDGNGDPIADAMFELWQADPEGIHNSDLDPNRTAPATADGFRGLGRAMANAQGEAT EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE FTTLVPGAFADEAPHFKVGVFARGMLERLYTRAYLPDADLSTDPVLAVVPADRRDLLVAQ EEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEE KTDDGFRFDITVQAEDNETPFFGL ECCCCEEEEEEEEECCCCCCCCCC >Mature Secondary Structure MIDTGKNGEFRYEQSNIIDQNEAEFGITPSQTVGPYVHIGLTLEGAEHLVEPGSEGAVSF CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCEEE TVSATDGNGDPIADAMFELWQADPEGIHNSDLDPNRTAPATADGFRGLGRAMANAQGEAT EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE FTTLVPGAFADEAPHFKVGVFARGMLERLYTRAYLPDADLSTDPVLAVVPADRRDLLVAQ EEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEE KTDDGFRFDITVQAEDNETPFFGL ECCCCEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2298704; 8063101 [H]