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The map label for this gene is oppA [H]

Identifier: 145296344

GI number: 145296344

Start: 2488640

End: 2490217

Strand: Reverse

Name: oppA [H]

Synonym: cgR_2259

Alternate gene names: 145296344

Gene position: 2490217-2488640 (Counterclockwise)

Preceding gene: 145296346

Following gene: 145296343

Centisome position: 75.14

GC content: 52.85

Gene sequence:

>1578_bases
ATGCGCACAGCCACAAAAGTCATCGCAACAGTGATGGCCTCAACCCTGGCTATCGGGCTGGCATCTTGTTCCAGCTCTAG
TGGCACCCCAGACGTGAATTACGTATCCGTCAACGGCACCGAACCTCAGCGCGGACTCATCCCGGGCGACACCAATGAAA
ACGGCGGTGGGCGAGTGGTGGACATGCTGTACTCCGGACTCGTCTACTTTGATGAAGCTGGCGTAGCTCAAAATGACCTG
GCGGAATCAATTGACCAGGAATCAGACACCACCTACAAAATCACTTTGCGTGATGGCATCAAATTCAGTGACGGATCGGA
TATTACTGCCACTGATTTTGTGGATACCTGGAATTTTGTAGTGGAAAATGGACTGCTCAACACCTCTTTCTTCTCACCGA
TTAAAGGGTATGAGGAGGGCGTGGAAACGCTCGAGGGTTTGAATGTGGTGGATGATCGCACATTTACCATCGAGCTTGTC
CAACCGGATTCTGAATTCACCCAACGCATTGGCTACTACGGTTTTGCACCGATGCCAGCTTCGGCTCGCGATGATATTGA
CGCCTTTGGTGAAAACCCCGTGTCCTCTGGCCCTTACAAACTAGAGCAGTGGGATCACAACGCAGAACTGAAAGTGGTGG
CCAATGAACACTACGATGGCCCGCGCGCAGCCAACAACGATGGCTTGAAGTACGTGTTCTACGCCCAAAATGATGCAGCT
TATTCAGATCTGTTGGCTGGAAACCTAGATGTGCTGGATCTCATTCCACCATCGGCGTACACCACCTATGAAGAGGAACT
GTCGGGTCGATCCATTAATCAACCTGCGGCCTCCTATCTGGAACTCTCCATTCGCATGGAATCCCCCAACTTTGAAGGGC
AACAGGGACAGTTGCGTCGACAAGCAATTTCTATGGCGATTAACCGTGAAGAAATCGCTGAGCAGATCTTCGCCGGCACC
TACACGCCTGCGCTCGACTTCACCGCGCCCGTGCTCGACGGCTGGCGCGATGATTTAAACGGCAATGACGTGCTGACTTT
CCAGCCTGACAAGGCCCGTGAGCTGTGGGAAGACGCTGAGGAGATCGCACCTTTTGAGGGCGAATTGCAGATCAGTTACA
ACGCGGATGTTCCCAACCGGGAATGGGTGGATGCGGTAGCAAACAGCATCAGCAACGAATTAGACGTCAACGCCACTGGC
AATCCTTTCCCCGATTTTAAATCCTTCCGCGACACATACCGCACCACCGGATTGGATGGCGCCTACCGCACCGCGTGGTT
TGCGGACTACCCAAGCATCGGCAACTTCCTTGGACCTAACTACACCTCGGGTGTGGCCTCCAACGATGCCAAGTACGAAA
ACCCAGAATTTGATCAATTGATTGCCGACGCCGCAGCAGCCTCCACCAAGGAGGAAACTTTCCAGGCCTATGCGCAAGCC
CAGGAAATGTTGTTGCGCGATCTTCCCGCAATCCCACTGTGGTACCCGAATGTGGTTGGCGGCTACTCAGAATCCGTGGA
CAACGTCTCCGTAAACTGGAAGGCCATACCTGTTTATTGGGCAATTACAAAGCAATAA

Upstream 100 bases:

>100_bases
TAGGTGTTATGGGTCACTGATTAGATTTGATTTGTTGGCCATACCAAATAGGCCCACACAGGCACGTTGCAAACAGCAAC
GCTCACCCATAGGAGATTTA

Downstream 100 bases:

>100_bases
ACTCATTAACCTAAATCCGGATACTTGATAAACAAGTACAGGGGTTAAGATGGTCTGCGTGACTGACCAGAATAATGAGA
CCACCAGCCAGAACCGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVVDMLYSGLVYFDEAGVAQNDL
AESIDQESDTTYKITLRDGIKFSDGSDITATDFVDTWNFVVENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELV
QPDSEFTQRIGYYGFAPMPASARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRRQAISMAINREEIAEQIFAGT
YTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAEEIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATG
NPFPDFKSFRDTYRTTGLDGAYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ

Sequences:

>Translated_525_residues
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVVDMLYSGLVYFDEAGVAQNDL
AESIDQESDTTYKITLRDGIKFSDGSDITATDFVDTWNFVVENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELV
QPDSEFTQRIGYYGFAPMPASARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRRQAISMAINREEIAEQIFAGT
YTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAEEIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATG
NPFPDFKSFRDTYRTTGLDGAYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ
>Mature_525_residues
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVVDMLYSGLVYFDEAGVAQNDL
AESIDQESDTTYKITLRDGIKFSDGSDITATDFVDTWNFVVENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELV
QPDSEFTQRIGYYGFAPMPASARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRRQAISMAINREEIAEQIFAGT
YTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAEEIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATG
NPFPDFKSFRDTYRTTGLDGAYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=459, Percent_Identity=24.400871459695, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1787495, Length=512, Percent_Identity=23.828125, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1789397, Length=479, Percent_Identity=25.2609603340292, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1787052, Length=501, Percent_Identity=24.5508982035928, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787762, Length=518, Percent_Identity=23.5521235521236, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789966, Length=526, Percent_Identity=23.1939163498099, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57775; Mature: 57775

Theoretical pI: Translated: 3.86; Mature: 3.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHH
DMLYSGLVYFDEAGVAQNDLAESIDQESDTTYKITLRDGIKFSDGSDITATDFVDTWNFV
HHHHCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCEEHHHHHHHHHH
VENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELVQPDSEFTQRIGYYGFAPMPA
HHCCCCCCHHHCHHHHHHHHHHHHHCCCEECCCEEEEEEECCCHHHHHHCCCCCCCCCCC
SARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
CCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCH
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRR
HHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCCCCHHCEEEEEEEECCCCCCCCHHHHHH
QAISMAINREEIAEQIFAGTYTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAE
HHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
EIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATGNPFPDFKSFRDTYRTTGLDG
HHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCCC
AYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
CHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ
HHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MRTATKVIATVMASTLAIGLASCSSSSGTPDVNYVSVNGTEPQRGLIPGDTNENGGGRVV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHH
DMLYSGLVYFDEAGVAQNDLAESIDQESDTTYKITLRDGIKFSDGSDITATDFVDTWNFV
HHHHCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCEEHHHHHHHHHH
VENGLLNTSFFSPIKGYEEGVETLEGLNVVDDRTFTIELVQPDSEFTQRIGYYGFAPMPA
HHCCCCCCHHHCHHHHHHHHHHHHHCCCEECCCEEEEEEECCCHHHHHHCCCCCCCCCCC
SARDDIDAFGENPVSSGPYKLEQWDHNAELKVVANEHYDGPRAANNDGLKYVFYAQNDAA
CCCCCHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCH
YSDLLAGNLDVLDLIPPSAYTTYEEELSGRSINQPAASYLELSIRMESPNFEGQQGQLRR
HHHHHCCCCCEEECCCCCCCCCHHHHHCCCCCCCCHHCEEEEEEEECCCCCCCCHHHHHH
QAISMAINREEIAEQIFAGTYTPALDFTAPVLDGWRDDLNGNDVLTFQPDKARELWEDAE
HHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
EIAPFEGELQISYNADVPNREWVDAVANSISNELDVNATGNPFPDFKSFRDTYRTTGLDG
HHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCCC
AYRTAWFADYPSIGNFLGPNYTSGVASNDAKYENPEFDQLIADAAAASTKEETFQAYAQA
CHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
QEMLLRDLPAIPLWYPNVVGGYSESVDNVSVNWKAIPVYWAITKQ
HHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]