| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296315
Identifier: 145296315
GI number: 145296315
Start: 2459624
End: 2461288
Strand: Reverse
Name: 145296315
Synonym: cgR_2230
Alternate gene names: NA
Gene position: 2461288-2459624 (Counterclockwise)
Preceding gene: 145296316
Following gene: 145296314
Centisome position: 74.27
GC content: 52.91
Gene sequence:
>1665_bases ATGATTGAGGTGCGTTTGGTTCCGGTGGCGGCTGTGATGTGGATGGCTGTCGCTGCGTTGATTATCAGTGGTTCGTGGGT GTTGTCGGTGGGGATTGTTGGCATCGCGATCATTGCTGCTTGTGTGTTTAAACACTGGGGTCAAGCTGTGGTGATAGCTG CACTGAGCGTTGGTGCCGTAGTGATGGCTGCGTTGAGAATCAGCAGCGCGAAGGCATTTGAAGCACCGCAAACCTGGGTG GGTACCGCAGAGACCATCAAGTTTTTAGACAGCGGTGATCAACTAATCAGTTTGAGAGTAGAAGGCTATCCAGCGCCGAT TCCAGTGTTTTACTCTGGTAGCGACACCATTGAGAAAGCCTCTCTCATTGCAGTGTCCGGTCGGATTAAACCAGATAGTT TCCCTGGGGTGGGTGATCTGACCATTTCCACCGAAGACATTGATCAGTTGGAACCGGCCACTGGTTATAGCGCATGGGTG AACCAGGTGCGTGACGGGTTTTCCCAAGCCGTGGAAGAAACCGTGGGGGAGTCTTCCCGTGGACTGATTCCAGGCATGGT GTTGGGGGATACGCGGTTGCAGGGGTCAATTGAAGCCCAAACCTATATTGATACGGGGTTGTCTCACCTGTCAGCTGTTA GTGGAAGCAATGTAGCCATTGTGGTGTCCTCAGTGGTGGTGTTGTCGTATTTTCTCACCGCTGGGCCACGCATCAGGGTG GTGGCGTCATTGCTGTCCTTAGTTATTTTTGTCTCCCTCGTGGGGTTTGAACCAAGTGTGCTTCGTGCTTCGGTCACAGG CATCGTGGGGCTTCTGGCAATCATTAACTCTTCTCGGATGGAGCCGATGCATGGGTTGAGTCTTTCGGTGATTTGCTTAC TGTTTTATGATTCCAACCTGGCGGTGCATTACGGATTCTTACTCTCGTGTGCAGCAACTGCTGGCATTGTGATGCTTCAA CCACTGCTGTACCGTGCCATCGGTCCACCACTGGCGGTGTGGAAAGTACCAGACATCGTGGTGCGCGCTTTCGCGGTGTC CATTGCCGCTGATCTGGTGACCATCCCGATTATCGCTCTGATGGCTCGCCAAATATCCCTCGTGGCAGTGCTGGCCAACG TGTTGGTTGAATTAGCTGTTCCACCCATCACGTTGCTTGGGTTGATTGCCGTGCTGGCAAGCCTTCTTCCCTGGTCAGTG GAATACCCACTCTTGAAAATCATTGAGCCCTTTACCTGGTGGATTCATCATGTGGCCAAGTGGTGCCAACAATTACCCAA TTCGACGCTGGAAATAAGTGCTGGTTGGGCAGGGATTGCCTGGGCGTGTGTGGCAGCGGTGTGGGTGGTGGTGATTATTT ACAAAGGATATGTGCGCACCCTTGCAGTGTGTTGTGTCTGCTTCTTTCTTTTCGGCGCGTGGAATAACAGACTGCCAGCC CAAATAGATCCGACAGAGCTGCGGTTTGTCATCATCGCCGATGATTCTGAGCTCACTGATGTGCCCGAACATGCAGAACT GATCATCGTGGAAGACCCCCACGGCAGCATGTCCGATCGCCCCATCGTCACCAGAGAAGGAATCCCTGTACTGTATCCAT ACCGCGATGGGGAGGTCAGCCTTCATATTGATGGCACCCAGCATGCAGCGGACGGGAGATTTTAA
Upstream 100 bases:
>100_bases TTCGGGAGAGCAACGGTGGGTTTAGCACCGTGGAGGATTTACTGCAGGTCAAGGGGATTGGGCCCTCAAAGTTTGAGCAG ATCTCTGGATTGGTGTCCCC
Downstream 100 bases:
>100_bases CGACACTTGTGGCACGATGGTCACGTGGCTTCAGCACCTATTTCAGTTCAACCAGCGGTCCATCTTGTTCTCGGCGAGGA CGAGTTCCTTGCCGAACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Internalization-Related Competence; Competence Protein; ComEC Operon Protein; ComEC/Rec2-Like Protein; DNA Internalization Competence
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MIEVRLVPVAAVMWMAVAALIISGSWVLSVGIVGIAIIAACVFKHWGQAVVIAALSVGAVVMAALRISSAKAFEAPQTWV GTAETIKFLDSGDQLISLRVEGYPAPIPVFYSGSDTIEKASLIAVSGRIKPDSFPGVGDLTISTEDIDQLEPATGYSAWV NQVRDGFSQAVEETVGESSRGLIPGMVLGDTRLQGSIEAQTYIDTGLSHLSAVSGSNVAIVVSSVVVLSYFLTAGPRIRV VASLLSLVIFVSLVGFEPSVLRASVTGIVGLLAIINSSRMEPMHGLSLSVICLLFYDSNLAVHYGFLLSCAATAGIVMLQ PLLYRAIGPPLAVWKVPDIVVRAFAVSIAADLVTIPIIALMARQISLVAVLANVLVELAVPPITLLGLIAVLASLLPWSV EYPLLKIIEPFTWWIHHVAKWCQQLPNSTLEISAGWAGIAWACVAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPA QIDPTELRFVIIADDSELTDVPEHAELIIVEDPHGSMSDRPIVTREGIPVLYPYRDGEVSLHIDGTQHAADGRF
Sequences:
>Translated_554_residues MIEVRLVPVAAVMWMAVAALIISGSWVLSVGIVGIAIIAACVFKHWGQAVVIAALSVGAVVMAALRISSAKAFEAPQTWV GTAETIKFLDSGDQLISLRVEGYPAPIPVFYSGSDTIEKASLIAVSGRIKPDSFPGVGDLTISTEDIDQLEPATGYSAWV NQVRDGFSQAVEETVGESSRGLIPGMVLGDTRLQGSIEAQTYIDTGLSHLSAVSGSNVAIVVSSVVVLSYFLTAGPRIRV VASLLSLVIFVSLVGFEPSVLRASVTGIVGLLAIINSSRMEPMHGLSLSVICLLFYDSNLAVHYGFLLSCAATAGIVMLQ PLLYRAIGPPLAVWKVPDIVVRAFAVSIAADLVTIPIIALMARQISLVAVLANVLVELAVPPITLLGLIAVLASLLPWSV EYPLLKIIEPFTWWIHHVAKWCQQLPNSTLEISAGWAGIAWACVAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPA QIDPTELRFVIIADDSELTDVPEHAELIIVEDPHGSMSDRPIVTREGIPVLYPYRDGEVSLHIDGTQHAADGRF >Mature_554_residues MIEVRLVPVAAVMWMAVAALIISGSWVLSVGIVGIAIIAACVFKHWGQAVVIAALSVGAVVMAALRISSAKAFEAPQTWV GTAETIKFLDSGDQLISLRVEGYPAPIPVFYSGSDTIEKASLIAVSGRIKPDSFPGVGDLTISTEDIDQLEPATGYSAWV NQVRDGFSQAVEETVGESSRGLIPGMVLGDTRLQGSIEAQTYIDTGLSHLSAVSGSNVAIVVSSVVVLSYFLTAGPRIRV VASLLSLVIFVSLVGFEPSVLRASVTGIVGLLAIINSSRMEPMHGLSLSVICLLFYDSNLAVHYGFLLSCAATAGIVMLQ PLLYRAIGPPLAVWKVPDIVVRAFAVSIAADLVTIPIIALMARQISLVAVLANVLVELAVPPITLLGLIAVLASLLPWSV EYPLLKIIEPFTWWIHHVAKWCQQLPNSTLEISAGWAGIAWACVAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPA QIDPTELRFVIIADDSELTDVPEHAELIIVEDPHGSMSDRPIVTREGIPVLYPYRDGEVSLHIDGTQHAADGRF
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59252; Mature: 59252
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVRLVPVAAVMWMAVAALIISGSWVLSVGIVGIAIIAACVFKHWGQAVVIAALSVGAV CEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VMAALRISSAKAFEAPQTWVGTAETIKFLDSGDQLISLRVEGYPAPIPVFYSGSDTIEKA HHHHHHHCCCCCCCCCCHHCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCHHHH SLIAVSGRIKPDSFPGVGDLTISTEDIDQLEPATGYSAWVNQVRDGFSQAVEETVGESSR EEEEEECCCCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GLIPGMVLGDTRLQGSIEAQTYIDTGLSHLSAVSGSNVAIVVSSVVVLSYFLTAGPRIRV CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH VASLLSLVIFVSLVGFEPSVLRASVTGIVGLLAIINSSRMEPMHGLSLSVICLLFYDSNL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEECCCC AVHYGFLLSCAATAGIVMLQPLLYRAIGPPLAVWKVPDIVVRAFAVSIAADLVTIPIIAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH MARQISLVAVLANVLVELAVPPITLLGLIAVLASLLPWSVEYPLLKIIEPFTWWIHHVAK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH WCQQLPNSTLEISAGWAGIAWACVAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPA HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QIDPTELRFVIIADDSELTDVPEHAELIIVEDPHGSMSDRPIVTREGIPVLYPYRDGEVS CCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEEEECCCEEE LHIDGTQHAADGRF EEECCCCCCCCCCC >Mature Secondary Structure MIEVRLVPVAAVMWMAVAALIISGSWVLSVGIVGIAIIAACVFKHWGQAVVIAALSVGAV CEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VMAALRISSAKAFEAPQTWVGTAETIKFLDSGDQLISLRVEGYPAPIPVFYSGSDTIEKA HHHHHHHCCCCCCCCCCHHCCHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCHHHH SLIAVSGRIKPDSFPGVGDLTISTEDIDQLEPATGYSAWVNQVRDGFSQAVEETVGESSR EEEEEECCCCCCCCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GLIPGMVLGDTRLQGSIEAQTYIDTGLSHLSAVSGSNVAIVVSSVVVLSYFLTAGPRIRV CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH VASLLSLVIFVSLVGFEPSVLRASVTGIVGLLAIINSSRMEPMHGLSLSVICLLFYDSNL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEECCCC AVHYGFLLSCAATAGIVMLQPLLYRAIGPPLAVWKVPDIVVRAFAVSIAADLVTIPIIAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH MARQISLVAVLANVLVELAVPPITLLGLIAVLASLLPWSVEYPLLKIIEPFTWWIHHVAK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH WCQQLPNSTLEISAGWAGIAWACVAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPA HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QIDPTELRFVIIADDSELTDVPEHAELIIVEDPHGSMSDRPIVTREGIPVLYPYRDGEVS CCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEEEECCCEEE LHIDGTQHAADGRF EEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA