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The map label for this gene is ygiK [H]

Identifier: 145296305

GI number: 145296305

Start: 2451047

End: 2452360

Strand: Reverse

Name: ygiK [H]

Synonym: cgR_2220

Alternate gene names: 145296305

Gene position: 2452360-2451047 (Counterclockwise)

Preceding gene: 145296306

Following gene: 145296301

Centisome position: 74.0

GC content: 52.59

Gene sequence:

>1314_bases
ATGTTGTCGCCAGCAGCTGTAGCAGCTTTAATTCTTGTCATCGGCATTGTGGTGCTCATTATCGCATCAGTGCCCGTTGC
CATTGCCATCGGTTTGCCCTCACTTTTTGCCGCGATGGCCGTGCTTGGCCCAGAAAACGCCGCGCAGGCCGTCGCGCAGC
GCATGTTTACCGGCACAAACTCCTTTACACTCCTTGCCATTCCGTTCTTCGTGTTGGCGGGTTCGCTGATGAACTCGGGT
GGTATTGCCACACGGCTTATCGACGCCGCGAAGGTGCTTGTCGGCCGCATGCCTGCCTCCATGGCCAATACGAATATCGC
AGCAAACGGTCTCTTCGGAGCAGTTTCAGGGGCAGCGGTAGCAGCAGCTTCTGCTGTGGGAACCGTCATGACACCAAAAA
TGAAGGAAGAGGGCTACTCGCGCGCCTACTCAGCGGCCGTCAACGTGGCTTCAGCACCTGCAGGTATGATGATCCCGCCA
TCAAACACTTTCATTGTGTATTCTTTGGTGTCCTCGACATCAATTGCAGCACTATTTATGGCCGGTGTTGGACCCGGTCT
GCTCTGGATTCTGGCCTGTGTCATCGTGGGAACTTGGTTAGCGCGAAAGGAAAACTACAAGCGCGAGCAGATTCATCCAA
CATTCAAGCAGTCGCTTGTTGTGCTGTGGAGGGCGCTGCCTTCACTGCTCATGATCGTCATCGTTGTTGGAGGTATCTTG
CTGGGCTGGTTCACTCCAACTGAATCCGCTGCTATTGCTGTAGTGTACTGCCTGGTCTTGGGCTTTATTTACCGTACAAT
CAAGGTGGGAGATCTGGCAGATATTTTGCTCAAGGCAACTCGCACCACATCAATTGTCATGCTACTCATTGCAGTTTCTG
CAGCACTGTCGTGGGTGATGGCCTTTGCCAAGATCCCTCAGATGATCTCTGATGCGCTTCTTTCGGTATCCGATTCCAAG
GTTGTCATCTTGTTAATCATGATGTTCGTCCTGTTGCTGATTGGTACCGTAATGGACCCAACACCAGCAATTTTGATCTT
CGTCCCGATCTTCCTTCCAGTGGTCACCGAACTTGGTGTGGATCCAGTCCACTTCGGTGCGATGGTGGTGATGAACCTGT
CCGTGGGCACGATTACTCCGCCGGTTGGCAATGTACTGTTCGTTGGTTCGCAAGTAGCAGGCTTGCGTGTGGAAACAGTG
ATTAGGCGTCTGTGGCCGTATCTCTTCGCCATTATTATCGCCTTGTTCGTGGTTGTTTTCGTACCGCAGATCTCTATCTG
GTTGCCGACAACCATGGGGCTGATGACAGACTAA

Upstream 100 bases:

>100_bases
TACCCCCTTGTTGATGAATCAGAAGAACCTCGAGATTTGGACGAGCTAGAGGCCCAAAGCGCTATAGATTCTGCAAGTTC
AGCGGAAGGTAGGAACTAAT

Downstream 100 bases:

>100_bases
ATCTCCAGCCATCAGCTAAGAAACCGCGATCGTATTTCCTTGAGGGAAAGCGATGGCGGTTTTCTTATTGCACGAAAGGA
ACGGTGACATGCCTTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTNSFTLLAIPFFVLAGSLMNSG
GIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAVAAASAVGTVMTPKMKEEGYSRAYSAAVNVASAPAGMMIPP
SNTFIVYSLVSSTSIAALFMAGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVMAFAKIPQMISDALLSVSDSK
VVILLIMMFVLLLIGTVMDPTPAILIFVPIFLPVVTELGVDPVHFGAMVVMNLSVGTITPPVGNVLFVGSQVAGLRVETV
IRRLWPYLFAIIIALFVVVFVPQISIWLPTTMGLMTD

Sequences:

>Translated_437_residues
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTNSFTLLAIPFFVLAGSLMNSG
GIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAVAAASAVGTVMTPKMKEEGYSRAYSAAVNVASAPAGMMIPP
SNTFIVYSLVSSTSIAALFMAGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVMAFAKIPQMISDALLSVSDSK
VVILLIMMFVLLLIGTVMDPTPAILIFVPIFLPVVTELGVDPVHFGAMVVMNLSVGTITPPVGNVLFVGSQVAGLRVETV
IRRLWPYLFAIIIALFVVVFVPQISIWLPTTMGLMTD
>Mature_437_residues
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTNSFTLLAIPFFVLAGSLMNSG
GIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAVAAASAVGTVMTPKMKEEGYSRAYSAAVNVASAPAGMMIPP
SNTFIVYSLVSSTSIAALFMAGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVMAFAKIPQMISDALLSVSDSK
VVILLIMMFVLLLIGTVMDPTPAILIFVPIFLPVVTELGVDPVHFGAMVVMNLSVGTITPPVGNVLFVGSQVAGLRVETV
IRRLWPYLFAIIIALFVVVFVPQISIWLPTTMGLMTD

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=383, Percent_Identity=38.1201044386423, Blast_Score=235, Evalue=5e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45884; Mature: 45884

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
SFTLLAIPFFVLAGSLMNSGGIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAV
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH
AAASAVGTVMTPKMKEEGYSRAYSAAVNVASAPAGMMIPPSNTFIVYSLVSSTSIAALFM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEHHHHHHHHHHHH
AGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVM
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAKIPQMISDALLSVSDSKVVILLIMMFVLLLIGTVMDPTPAILIFVPIFLPVVTELGV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
DPVHFGAMVVMNLSVGTITPPVGNVLFVGSQVAGLRVETVIRRLWPYLFAIIIALFVVVF
CHHHHHHHHHEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VPQISIWLPTTMGLMTD
HHHHHHHHCCHHCCCCC
>Mature Secondary Structure
MLSPAAVAALILVIGIVVLIIASVPVAIAIGLPSLFAAMAVLGPENAAQAVAQRMFTGTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
SFTLLAIPFFVLAGSLMNSGGIATRLIDAAKVLVGRMPASMANTNIAANGLFGAVSGAAV
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH
AAASAVGTVMTPKMKEEGYSRAYSAAVNVASAPAGMMIPPSNTFIVYSLVSSTSIAALFM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEHHHHHHHHHHHH
AGVGPGLLWILACVIVGTWLARKENYKREQIHPTFKQSLVVLWRALPSLLMIVIVVGGIL
HCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWFTPTESAAIAVVYCLVLGFIYRTIKVGDLADILLKATRTTSIVMLLIAVSAALSWVM
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAKIPQMISDALLSVSDSKVVILLIMMFVLLLIGTVMDPTPAILIFVPIFLPVVTELGV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
DPVHFGAMVVMNLSVGTITPPVGNVLFVGSQVAGLRVETVIRRLWPYLFAIIIALFVVVF
CHHHHHHHHHEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VPQISIWLPTTMGLMTD
HHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]