| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is gsiD [H]
Identifier: 145296287
GI number: 145296287
Start: 2431477
End: 2432307
Strand: Direct
Name: gsiD [H]
Synonym: cgR_2203
Alternate gene names: 145296287
Gene position: 2431477-2432307 (Clockwise)
Preceding gene: 145296286
Following gene: 145296288
Centisome position: 73.37
GC content: 55.35
Gene sequence:
>831_bases GTGACAACGATCAAAAACATGCCCCTTTCAGGGAAAATCGGCGGCTTCATAGTTGCCGTTGTATTTGTTCTTGCTGCGCT GTCTTTCATTTGGACTCCGTTTGATCCAGTTCAAGCTTTCCCACAGGAGCGCCTTGAGGGAAGTTCTTTGAGGCACCTGT TGGGAACGGATCGTTATGGTCGCGATGTTTTATCCCAGATCATGGTTGGTTCCCGCGTCACGTTGTTGGTGGGCATCATT GCGGTGGCGATCGCAGCATTAATCGGCACGCCACTGGGTATTGCTGCGGGAATGCGCCGTGGCATGGTGGAAACCTTTGT CATGCGTGGTGCCGATTTAATGTTGGCGTTCCCAGCACTGTTGTTGGCGATTATTTCCGGCGCCGTTTTCGGCGCCTCCA CGTGGTCCGCGATGGTCGCGATCGGCATCGCAGGCATCCCTAGTTTTGCCCGCGTGGCTCGTGCAGGCACATTGCAGGTG ACCAGTCAGAATTTCATCGCAGCTGCTCGGCTATCAAAAGTAAGTTCCGCCCGGATCGCGCTTCGCCATATTTTGCCCAA CATCACCAGCATTTTGATCGTTCAGGCATCAGTAGCTTTTGCCCTGGCGATCCTGGCGGAAGCCGCATTGAGTTTCCTCG GTTTGGGCACCACTCCCCCGGATCCCAGCTGGGGTCGCATGTTGCAAACTGCTCAAGCATCCATCGGCGTCACCCCCATG TTGGCGGTGTGGCCCGGTGCTGCGATCGCTTTGACGGTCCTTGGTTTTAATCTTTTCGGTGATGGTTTACGCGATGCCAT CGATCCAAAGCGGGAGGTCGGCCGTGCTTAA
Upstream 100 bases:
>100_bases GCTGGTTAATTTGGTGGTTGATCTGCTGTATCAGGTGATTGATCCAAGAGTCGGTGCTGTTGGGGTTGCTAGCACTAAGG TTCCAGGGAGCGTGGCTTAA
Downstream 100 bases:
>100_bases AGTTTCTGATTTAACGGTTGGCAACAATTTTGTCCACAACGTCTCCTTCGAGGTCAACCCCGGCGAACGCGTCGGCATCA TCGGCGAGTCCGGCTCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTTIKNMPLSGKIGGFIVAVVFVLAALSFIWTPFDPVQAFPQERLEGSSLRHLLGTDRYGRDVLSQIMVGSRVTLLVGII AVAIAALIGTPLGIAAGMRRGMVETFVMRGADLMLAFPALLLAIISGAVFGASTWSAMVAIGIAGIPSFARVARAGTLQV TSQNFIAAARLSKVSSARIALRHILPNITSILIVQASVAFALAILAEAALSFLGLGTTPPDPSWGRMLQTAQASIGVTPM LAVWPGAAIALTVLGFNLFGDGLRDAIDPKREVGRA
Sequences:
>Translated_276_residues MTTIKNMPLSGKIGGFIVAVVFVLAALSFIWTPFDPVQAFPQERLEGSSLRHLLGTDRYGRDVLSQIMVGSRVTLLVGII AVAIAALIGTPLGIAAGMRRGMVETFVMRGADLMLAFPALLLAIISGAVFGASTWSAMVAIGIAGIPSFARVARAGTLQV TSQNFIAAARLSKVSSARIALRHILPNITSILIVQASVAFALAILAEAALSFLGLGTTPPDPSWGRMLQTAQASIGVTPM LAVWPGAAIALTVLGFNLFGDGLRDAIDPKREVGRA >Mature_275_residues TTIKNMPLSGKIGGFIVAVVFVLAALSFIWTPFDPVQAFPQERLEGSSLRHLLGTDRYGRDVLSQIMVGSRVTLLVGIIA VAIAALIGTPLGIAAGMRRGMVETFVMRGADLMLAFPALLLAIISGAVFGASTWSAMVAIGIAGIPSFARVARAGTLQVT SQNFIAAARLSKVSSARIALRHILPNITSILIVQASVAFALAILAEAALSFLGLGTTPPDPSWGRMLQTAQASIGVTPML AVWPGAAIALTVLGFNLFGDGLRDAIDPKREVGRA
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=239, Percent_Identity=45.1882845188285, Blast_Score=203, Evalue=8e-54, Organism=Escherichia coli, GI1787760, Length=256, Percent_Identity=40.625, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI1789964, Length=248, Percent_Identity=44.758064516129, Blast_Score=168, Evalue=4e-43, Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1787498, Length=219, Percent_Identity=39.2694063926941, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1787549, Length=230, Percent_Identity=37.8260869565217, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1788505, Length=230, Percent_Identity=30.4347826086957, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28790; Mature: 28658
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIKNMPLSGKIGGFIVAVVFVLAALSFIWTPFDPVQAFPQERLEGSSLRHLLGTDRYG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHCHHHHHHHHCCCCCC RDVLSQIMVGSRVTLLVGIIAVAIAALIGTPLGIAAGMRRGMVETFVMRGADLMLAFPAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLAIISGAVFGASTWSAMVAIGIAGIPSFARVARAGTLQVTSQNFIAAARLSKVSSARIA HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH LRHILPNITSILIVQASVAFALAILAEAALSFLGLGTTPPDPSWGRMLQTAQASIGVTPM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHH LAVWPGAAIALTVLGFNLFGDGLRDAIDPKREVGRA HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC >Mature Secondary Structure TTIKNMPLSGKIGGFIVAVVFVLAALSFIWTPFDPVQAFPQERLEGSSLRHLLGTDRYG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHHHHCHHHHHHHHCCCCCC RDVLSQIMVGSRVTLLVGIIAVAIAALIGTPLGIAAGMRRGMVETFVMRGADLMLAFPAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLAIISGAVFGASTWSAMVAIGIAGIPSFARVARAGTLQVTSQNFIAAARLSKVSSARIA HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHH LRHILPNITSILIVQASVAFALAILAEAALSFLGLGTTPPDPSWGRMLQTAQASIGVTPM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHH LAVWPGAAIALTVLGFNLFGDGLRDAIDPKREVGRA HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]