| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is glnA [H]
Identifier: 145296187
GI number: 145296187
Start: 2325253
End: 2326593
Strand: Reverse
Name: glnA [H]
Synonym: cgR_2106
Alternate gene names: 145296187
Gene position: 2326593-2325253 (Counterclockwise)
Preceding gene: 145296190
Following gene: 145296186
Centisome position: 70.2
GC content: 52.87
Gene sequence:
>1341_bases ATGAACAGCGAACAGGAATTTGTACTCAGCGCCATTGAAGAACGTGACATTAAGTTTGTGCGTCTATGGTTCACTGACAT TCTTGGCCACCTGAAGTCAGTGGTTGTGGCTCCTGCAGAACTAGAGTCTGCGTTGGAAGAAGGCATCGGATTCGATGGCT CAGCTATTGAGGGCTACGCGCGTATCTCGGAAGCGGACACCATTGCCCGCCCAGATCCTTCGACATTCCAGGTCCTCCCA CTAGAAGCGGGCATCTCAAAACTGCAGGCAGCACGCCTGTTTTGCGATGTCACGATGCCAGACGGACAGCCATCTTTTTC TGACCCGCGCCAAGTGCTGCGCAGGCAGGTCCAACTAGCTGCAGATGAAGGCTTGACCTGCATGATCTCACCAGAGATTG AGTTCTATTTGGTGCAAAGCCTTCGCACCAACGGACTGCCACCTGTGCCCACTGACAACGGCGGATATTTCGACCAAGCC ACATTCAATGAGGCGCCGAATTTCCGTCGAAACGCGATGGTAGCGCTGGAGGAACTCGGCATCCCTGTCGAGTTCTCCCA CCATGAAACTGCACCTGGCCAGCAAGAAATCGATTTACGCCATGCGGATGCGCTCACCATGGCCGACAACATCATGACCT TCCGCTACATCATGAAACAGGTGGCAAGGGACCAAGGCGTTGGGGCATCATTTATGCCCAAGCCATTCCAAGAACATGCA GGCTCCGCCATGCACACGCACATGTCCTTATTTGAGGGCGATACCAACGCGTTCCACGATCCAGACGATTCTTACATGCT GTCCAAAACCGCAAAACAGTTCATCGCTGGAATCTTGCATCACGCTCCAGAATTCACCGCTGTGACCAACCAGTGGGTCA ATTCCTACAAACGCATCGTGTACGGAAACGAAGCTCCAACTGCGGCAACCTGGGGTGTATCTAATCGTTCTGCGCTGGTT CGTGTTCCTACCTACCGTTTGAATAAGGAGGAGTCGCGCCGGGTGGAGGTGCGTCTTCCTGATACCGCTTGTAACCCATA TTTGGCGTTTTCAGTGATGCTCGGCGCTGGTTTGAAAGGCATTAAAGAAGGTTATGAGCTCGACGAGCCAGCTGAGGACG ATATCTCCAACTTGAGCTTCCGGGAACGTCGCGCCATGGGCTACAACGATCTGCCAAGCAGCCTTGATCAGGCACTGCGC CAAATGGAAAAGTCAGAGCTTGTTGCTGACATCCTCGGTGAGCACGTTTTTGAGTTTTTCTTGCGCAATAAGTGGCGTGA ATGGCGTGACTACCAAGAGCAGATCACTCCGTGGGAGCTCCGAAACAATCTTGATTACTAG
Upstream 100 bases:
>100_bases CGCGACATCCTTGAGTAACTCTGAGAAAAACTACCCCCGATGCGAGTATAAAAGTGGCAAATGCGCAGTCGATGTCCCAT CGCTGCGTAGATTAGTTTTC
Downstream 100 bases:
>100_bases ACTTTTGCACTCCAATGGAAACCCTACGGTGACCCAATTGCGACCCGATAAAGGAGGGGAGAAGCTATGTCAGGACCGTT AAGAAGTGAACGTAAAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glutamate--ammonia ligase 2 [H]
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MNSEQEFVLSAIEERDIKFVRLWFTDILGHLKSVVVAPAELESALEEGIGFDGSAIEGYARISEADTIARPDPSTFQVLP LEAGISKLQAARLFCDVTMPDGQPSFSDPRQVLRRQVQLAADEGLTCMISPEIEFYLVQSLRTNGLPPVPTDNGGYFDQA TFNEAPNFRRNAMVALEELGIPVEFSHHETAPGQQEIDLRHADALTMADNIMTFRYIMKQVARDQGVGASFMPKPFQEHA GSAMHTHMSLFEGDTNAFHDPDDSYMLSKTAKQFIAGILHHAPEFTAVTNQWVNSYKRIVYGNEAPTAATWGVSNRSALV RVPTYRLNKEESRRVEVRLPDTACNPYLAFSVMLGAGLKGIKEGYELDEPAEDDISNLSFRERRAMGYNDLPSSLDQALR QMEKSELVADILGEHVFEFFLRNKWREWRDYQEQITPWELRNNLDY
Sequences:
>Translated_446_residues MNSEQEFVLSAIEERDIKFVRLWFTDILGHLKSVVVAPAELESALEEGIGFDGSAIEGYARISEADTIARPDPSTFQVLP LEAGISKLQAARLFCDVTMPDGQPSFSDPRQVLRRQVQLAADEGLTCMISPEIEFYLVQSLRTNGLPPVPTDNGGYFDQA TFNEAPNFRRNAMVALEELGIPVEFSHHETAPGQQEIDLRHADALTMADNIMTFRYIMKQVARDQGVGASFMPKPFQEHA GSAMHTHMSLFEGDTNAFHDPDDSYMLSKTAKQFIAGILHHAPEFTAVTNQWVNSYKRIVYGNEAPTAATWGVSNRSALV RVPTYRLNKEESRRVEVRLPDTACNPYLAFSVMLGAGLKGIKEGYELDEPAEDDISNLSFRERRAMGYNDLPSSLDQALR QMEKSELVADILGEHVFEFFLRNKWREWRDYQEQITPWELRNNLDY >Mature_446_residues MNSEQEFVLSAIEERDIKFVRLWFTDILGHLKSVVVAPAELESALEEGIGFDGSAIEGYARISEADTIARPDPSTFQVLP LEAGISKLQAARLFCDVTMPDGQPSFSDPRQVLRRQVQLAADEGLTCMISPEIEFYLVQSLRTNGLPPVPTDNGGYFDQA TFNEAPNFRRNAMVALEELGIPVEFSHHETAPGQQEIDLRHADALTMADNIMTFRYIMKQVARDQGVGASFMPKPFQEHA GSAMHTHMSLFEGDTNAFHDPDDSYMLSKTAKQFIAGILHHAPEFTAVTNQWVNSYKRIVYGNEAPTAATWGVSNRSALV RVPTYRLNKEESRRVEVRLPDTACNPYLAFSVMLGAGLKGIKEGYELDEPAEDDISNLSFRERRAMGYNDLPSSLDQALR QMEKSELVADILGEHVFEFFLRNKWREWRDYQEQITPWELRNNLDY
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=452, Percent_Identity=24.5575221238938, Blast_Score=116, Evalue=5e-26, Organism=Escherichia coli, GI1790301, Length=431, Percent_Identity=33.6426914153132, Blast_Score=214, Evalue=8e-57, Organism=Escherichia coli, GI87081870, Length=458, Percent_Identity=27.5109170305677, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 50382; Mature: 50382
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEQEFVLSAIEERDIKFVRLWFTDILGHLKSVVVAPAELESALEEGIGFDGSAIEGYA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHH RISEADTIARPDPSTFQVLPLEAGISKLQAARLFCDVTMPDGQPSFSDPRQVLRRQVQLA HHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHH ADEGLTCMISPEIEFYLVQSLRTNGLPPVPTDNGGYFDQATFNEAPNFRRNAMVALEELG HCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC IPVEFSHHETAPGQQEIDLRHADALTMADNIMTFRYIMKQVARDQGVGASFMPKPFQEHA CCEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHC GSAMHTHMSLFEGDTNAFHDPDDSYMLSKTAKQFIAGILHHAPEFTAVTNQWVNSYKRIV CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEE YGNEAPTAATWGVSNRSALVRVPTYRLNKEESRRVEVRLPDTACNPYLAFSVMLGAGLKG ECCCCCCCEECCCCCCCEEEECCCEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHH IKEGYELDEPAEDDISNLSFRERRAMGYNDLPSSLDQALRQMEKSELVADILGEHVFEFF HHCCCCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRNKWREWRDYQEQITPWELRNNLDY HHHHHHHHHHHHHHCCHHHHHCCCCC >Mature Secondary Structure MNSEQEFVLSAIEERDIKFVRLWFTDILGHLKSVVVAPAELESALEEGIGFDGSAIEGYA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHH RISEADTIARPDPSTFQVLPLEAGISKLQAARLFCDVTMPDGQPSFSDPRQVLRRQVQLA HHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHH ADEGLTCMISPEIEFYLVQSLRTNGLPPVPTDNGGYFDQATFNEAPNFRRNAMVALEELG HCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC IPVEFSHHETAPGQQEIDLRHADALTMADNIMTFRYIMKQVARDQGVGASFMPKPFQEHA CCEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHC GSAMHTHMSLFEGDTNAFHDPDDSYMLSKTAKQFIAGILHHAPEFTAVTNQWVNSYKRIV CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEE YGNEAPTAATWGVSNRSALVRVPTYRLNKEESRRVEVRLPDTACNPYLAFSVMLGAGLKG ECCCCCCCEECCCCCCCEEEECCCEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCHHH IKEGYELDEPAEDDISNLSFRERRAMGYNDLPSSLDQALRQMEKSELVADILGEHVFEFF HHCCCCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRNKWREWRDYQEQITPWELRNNLDY HHHHHHHHHHHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA