| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pepA [H]
Identifier: 145296166
GI number: 145296166
Start: 2301206
End: 2302747
Strand: Direct
Name: pepA [H]
Synonym: cgR_2085
Alternate gene names: 145296166
Gene position: 2301206-2302747 (Clockwise)
Preceding gene: 145296163
Following gene: 145296168
Centisome position: 69.44
GC content: 55.64
Gene sequence:
>1542_bases ATGGCGAAAAATGCCTACAGCACAACAGCACCAACCAAGGTGTCCAAGGATGCCACTCTTCCAGTTCGTGGAACGGTCGC TGAACTCAAGCTCGAAAAGAAGTTGCCAAAGAAGATTGATGCCATCATCGTCGCGATTTTTGAGGGCGAAGATTCCATCG AACTCGCCGGCGGCGAAATCCTCGATTTCATCTTCAGCACCGAGCAGCAGGCCGACATCCTCACTCAGCTCGAAGCTGTC GGCGCAAAGGCCACCGCAAACAGCATCACCCGCGTCCCAGGCACCGACGTTGCGCCTGTCATTGCGGTTGGCTTGGGCAA GGCTGATTTGCTTGACGACGAGACCCTCCGCCGCGCTTCCGGCACGGCGGCCCGCTCCCTCGGTGGTTTTGAAAATGTCG CCACCACCATCGGCGATTTGGGGCTTGCAGCAGCGGTGACCGGTTTCGGTCTCGGTTCTTACTCCTACGCGGGTCTGCGC AAGGAAACCGAAGAATCCAAGGACAAGACCACCACGGTCACTTTCATCAGCACGAGCAAGGATGACAAGGATGTCTTTGT TGAAGCTCAGATCATCGTGGAATCTGTCCTGCTCGCTCGTGACTTGGTGAATACCCCTTCATCACATCTGTACCCAGAGT CTTACTCAGTAATTGCATCCAATGAGGCGTCCAAGCACGGCTTGCAGACCACCATCCTGGATGAGAAGCAGCTTGCTGAT AAAGGTTTCGGCGGTATCCTCGCAGTCGGTAACGGCTCCTCCCGCAAGCCTCGTCTGCTACGCGTCGATTGGAAGCCACG CAAGGCTAAGAAGTCGATCGCTTTGGTTGGTAAAGGCATCACCTTCGACACCGGCGGAATTTCCATCAAGCCTGGCGCAA GCATGGAGAACATGATCTCCGACATGGGTGGATCCGCATCCGTATTGGCCACCATTATCGCTGCAGCTCGTTTGAACCTG TCGATCAACGTCTCCGCGTTCCTACCAATGGCTGAGAACATGCCATCCGGTGACGCTTTCCGCCCCGGCGATGTCATCAC TCATTTCGGTGGTATCACCTCCGAAATCTTGAACACCGACGCTGAAGGCCGCCTCATTCTGGCAGATGCCATTGCTTACG CTTCTGAAGATAAGCCTGACTACCTCATTGATGCAGCAACCCTGACTGGTGCTCAATTAGTCGCCTTAGGCCTGCGTACT TCAGGTGTCATGGGTACCGATGAGTTCCGCGACAGCGTTGCCAAGACTGGCCGCGAGGTTGGCGAGCAAGCATGGGCAAT GCCTCTTCCTGAGGAGCTCGATGAGCAGGTTAAGTCCCCTGTCGCTGACCTGCGCAATGTCACCAATTCCCGTTTCGCAG GAATGTCTGCTGCGGGTCGTTACCTGCAGGAATTCGTTGGTGCCGACATCGAGTGGGCTCACGTCGATATCGCTGGCCCT GCATACAACACTGCTGGTGAATTCGGTTACACGCCAAAGCGCGCAACCGGACAACCAGTGCGCACCTTCGTTCAGGTTCT GAAGGATCTGTCGGAAAGCTAA
Upstream 100 bases:
>100_bases GGTTTTGAGGAATGGCTAGGCTTGTTAAAAGTTAGTTTCAATTTGATGCCTCCCCCAACCAAAGCGGAGACACAACTTCA ACGAGAGGACTCAGCTTTCA
Downstream 100 bases:
>100_bases ACGCTAGTTAAAGATCAGGATTCTCGCCGCGCTCAAATTTAGCGCGGCGAGCTTTTTGTTCCTCACGCTTTCTTAAGATG CGCTCATATTCAATGCGTTC
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MAKNAYSTTAPTKVSKDATLPVRGTVAELKLEKKLPKKIDAIIVAIFEGEDSIELAGGEILDFIFSTEQQADILTQLEAV GAKATANSITRVPGTDVAPVIAVGLGKADLLDDETLRRASGTAARSLGGFENVATTIGDLGLAAAVTGFGLGSYSYAGLR KETEESKDKTTTVTFISTSKDDKDVFVEAQIIVESVLLARDLVNTPSSHLYPESYSVIASNEASKHGLQTTILDEKQLAD KGFGGILAVGNGSSRKPRLLRVDWKPRKAKKSIALVGKGITFDTGGISIKPGASMENMISDMGGSASVLATIIAAARLNL SINVSAFLPMAENMPSGDAFRPGDVITHFGGITSEILNTDAEGRLILADAIAYASEDKPDYLIDAATLTGAQLVALGLRT SGVMGTDEFRDSVAKTGREVGEQAWAMPLPEELDEQVKSPVADLRNVTNSRFAGMSAAGRYLQEFVGADIEWAHVDIAGP AYNTAGEFGYTPKRATGQPVRTFVQVLKDLSES
Sequences:
>Translated_513_residues MAKNAYSTTAPTKVSKDATLPVRGTVAELKLEKKLPKKIDAIIVAIFEGEDSIELAGGEILDFIFSTEQQADILTQLEAV GAKATANSITRVPGTDVAPVIAVGLGKADLLDDETLRRASGTAARSLGGFENVATTIGDLGLAAAVTGFGLGSYSYAGLR KETEESKDKTTTVTFISTSKDDKDVFVEAQIIVESVLLARDLVNTPSSHLYPESYSVIASNEASKHGLQTTILDEKQLAD KGFGGILAVGNGSSRKPRLLRVDWKPRKAKKSIALVGKGITFDTGGISIKPGASMENMISDMGGSASVLATIIAAARLNL SINVSAFLPMAENMPSGDAFRPGDVITHFGGITSEILNTDAEGRLILADAIAYASEDKPDYLIDAATLTGAQLVALGLRT SGVMGTDEFRDSVAKTGREVGEQAWAMPLPEELDEQVKSPVADLRNVTNSRFAGMSAAGRYLQEFVGADIEWAHVDIAGP AYNTAGEFGYTPKRATGQPVRTFVQVLKDLSES >Mature_512_residues AKNAYSTTAPTKVSKDATLPVRGTVAELKLEKKLPKKIDAIIVAIFEGEDSIELAGGEILDFIFSTEQQADILTQLEAVG AKATANSITRVPGTDVAPVIAVGLGKADLLDDETLRRASGTAARSLGGFENVATTIGDLGLAAAVTGFGLGSYSYAGLRK ETEESKDKTTTVTFISTSKDDKDVFVEAQIIVESVLLARDLVNTPSSHLYPESYSVIASNEASKHGLQTTILDEKQLADK GFGGILAVGNGSSRKPRLLRVDWKPRKAKKSIALVGKGITFDTGGISIKPGASMENMISDMGGSASVLATIIAAARLNLS INVSAFLPMAENMPSGDAFRPGDVITHFGGITSEILNTDAEGRLILADAIAYASEDKPDYLIDAATLTGAQLVALGLRTS GVMGTDEFRDSVAKTGREVGEQAWAMPLPEELDEQVKSPVADLRNVTNSRFAGMSAAGRYLQEFVGADIEWAHVDIAGPA YNTAGEFGYTPKRATGQPVRTFVQVLKDLSES
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=433, Percent_Identity=36.2586605080831, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI47155554, Length=356, Percent_Identity=35.6741573033708, Blast_Score=179, Evalue=4e-45, Organism=Escherichia coli, GI1790710, Length=498, Percent_Identity=32.1285140562249, Blast_Score=210, Evalue=2e-55, Organism=Escherichia coli, GI87082123, Length=327, Percent_Identity=38.2262996941896, Blast_Score=177, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17556903, Length=308, Percent_Identity=36.038961038961, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17565172, Length=357, Percent_Identity=25.4901960784314, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI221379063, Length=288, Percent_Identity=37.8472222222222, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI221379062, Length=288, Percent_Identity=37.8472222222222, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI21357381, Length=288, Percent_Identity=37.8472222222222, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI21355725, Length=434, Percent_Identity=29.0322580645161, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24661038, Length=432, Percent_Identity=28.0092592592593, Blast_Score=162, Evalue=5e-40, Organism=Drosophila melanogaster, GI161077148, Length=431, Percent_Identity=30.3944315545244, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI20130057, Length=431, Percent_Identity=30.3944315545244, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI20129969, Length=422, Percent_Identity=28.1990521327014, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24662227, Length=422, Percent_Identity=27.9620853080569, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI21355645, Length=426, Percent_Identity=27.9342723004695, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI24662223, Length=426, Percent_Identity=27.9342723004695, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI19922386, Length=337, Percent_Identity=29.3768545994065, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI20129963, Length=408, Percent_Identity=27.9411764705882, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24646701, Length=377, Percent_Identity=28.1167108753316, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI24646703, Length=377, Percent_Identity=28.1167108753316, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI21358201, Length=377, Percent_Identity=28.1167108753316, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 54138; Mature: 54007
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNAYSTTAPTKVSKDATLPVRGTVAELKLEKKLPKKIDAIIVAIFEGEDSIELAGGEI CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCEEECCCHH LDFIFSTEQQADILTQLEAVGAKATANSITRVPGTDVAPVIAVGLGKADLLDDETLRRAS HHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHCCCCCHHCCCHHHHHHHC GTAARSLGGFENVATTIGDLGLAAAVTGFGLGSYSYAGLRKETEESKDKTTTVTFISTSK CHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHCCCCEEEEEEEECCC DDKDVFVEAQIIVESVLLARDLVNTPSSHLYPESYSVIASNEASKHGLQTTILDEKQLAD CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHCCCEEEECCHHHHHC KGFGGILAVGNGSSRKPRLLRVDWKPRKAKKSIALVGKGITFDTGGISIKPGASMENMIS CCCCCEEEECCCCCCCCEEEEECCCCCHHHCCEEEEECCEEECCCCEEECCCCCHHHHHH DMGGSASVLATIIAAARLNLSINVSAFLPMAENMPSGDAFRPGDVITHFGGITSEILNTD HCCCCHHHHHHHHHHHHHCEEEEEHEECCHHCCCCCCCCCCCCHHHHHHCCHHHHHHCCC AEGRLILADAIAYASEDKPDYLIDAATLTGAQLVALGLRTSGVMGTDEFRDSVAKTGREV CCCCEEEEEHHHHCCCCCCCEEEEEHHHCCHHHEEEEHHCCCCCCCHHHHHHHHHHHHHH GEQAWAMPLPEELDEQVKSPVADLRNVTNSRFAGMSAAGRYLQEFVGADIEWAHVDIAGP HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCC AYNTAGEFGYTPKRATGQPVRTFVQVLKDLSES CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AKNAYSTTAPTKVSKDATLPVRGTVAELKLEKKLPKKIDAIIVAIFEGEDSIELAGGEI CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCEEECCCHH LDFIFSTEQQADILTQLEAVGAKATANSITRVPGTDVAPVIAVGLGKADLLDDETLRRAS HHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHCCCCCHHCCCHHHHHHHC GTAARSLGGFENVATTIGDLGLAAAVTGFGLGSYSYAGLRKETEESKDKTTTVTFISTSK CHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHCCCCEEEEEEEECCC DDKDVFVEAQIIVESVLLARDLVNTPSSHLYPESYSVIASNEASKHGLQTTILDEKQLAD CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHCCCEEEECCHHHHHC KGFGGILAVGNGSSRKPRLLRVDWKPRKAKKSIALVGKGITFDTGGISIKPGASMENMIS CCCCCEEEECCCCCCCCEEEEECCCCCHHHCCEEEEECCEEECCCCEEECCCCCHHHHHH DMGGSASVLATIIAAARLNLSINVSAFLPMAENMPSGDAFRPGDVITHFGGITSEILNTD HCCCCHHHHHHHHHHHHHCEEEEEHEECCHHCCCCCCCCCCCCHHHHHHCCHHHHHHCCC AEGRLILADAIAYASEDKPDYLIDAATLTGAQLVALGLRTSGVMGTDEFRDSVAKTGREV CCCCEEEEEHHHHCCCCCCCEEEEEHHHCCHHHEEEEHHCCCCCCCHHHHHHHHHHHHHH GEQAWAMPLPEELDEQVKSPVADLRNVTNSRFAGMSAAGRYLQEFVGADIEWAHVDIAGP HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCC AYNTAGEFGYTPKRATGQPVRTFVQVLKDLSES CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]