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The map label for this gene is ctaF [H]

Identifier: 145296156

GI number: 145296156

Start: 2290479

End: 2290910

Strand: Reverse

Name: ctaF [H]

Synonym: cgR_2075

Alternate gene names: 145296156

Gene position: 2290910-2290479 (Counterclockwise)

Preceding gene: 145296157

Following gene: 145296154

Centisome position: 69.12

GC content: 53.7

Gene sequence:

>432_bases
ATGAAGTCTTCAGCAAAACTCATGTACGGCCTGACCGTATTCATGGTCGCAATGGCTGTCATCTACATCTTCGCAACGAT
GCACGTTAATGACGGCGGCAGCGTCCCGGGTGTTGAGTGGGTCGGCGCAACCGCGTTAGTACTCTCAGCCGGTCTGACCC
TGATGCTTGGTGTCTATCTTCACTTCACTGAAGTCCGAGTAGACGTTCTTCCAGAGGACTGGGAAGAGGCTGAGGTTGCC
GACAAGGCAGGAACCCTCGGATTCTTCAGCCCAAGCTCCATTTGGCCGGCAGCTATGTCCGGTGCGGTTGGATTCCTTGC
ATTCGGCGTTGTGTACTTCCACTACTGGATGATCGCAGTTGGTCTGATGCTCCTGATCTTCACGATCACTAAGCTCAACC
TTCAGTACGGCGTGCCAAAGGAAAAGCACTAG

Upstream 100 bases:

>100_bases
CTCCGTACGCTACTTCCACTAGCCCATTCGTTTCCGATCGCACCGCAACCCGCGACGGCGAAAACACTCAGAGCAACGCT
TAAGAAGGAGTGGCGAAAAA

Downstream 100 bases:

>100_bases
TACTAAAACCACATATGCTCAACCCTATTGGCTGTCCGATAGGGTTGAGTATTTTGTCGTTTTCACAGGCTTTTCCAACT
TTGATCACCGTGACGAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKSSAKLMYGLTVFMVAMAVIYIFATMHVNDGGSVPGVEWVGATALVLSAGLTLMLGVYLHFTEVRVDVLPEDWEEAEVA
DKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAVGLMLLIFTITKLNLQYGVPKEKH

Sequences:

>Translated_143_residues
MKSSAKLMYGLTVFMVAMAVIYIFATMHVNDGGSVPGVEWVGATALVLSAGLTLMLGVYLHFTEVRVDVLPEDWEEAEVA
DKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAVGLMLLIFTITKLNLQYGVPKEKH
>Mature_143_residues
MKSSAKLMYGLTVFMVAMAVIYIFATMHVNDGGSVPGVEWVGATALVLSAGLTLMLGVYLHFTEVRVDVLPEDWEEAEVA
DKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAVGLMLLIFTITKLNLQYGVPKEKH

Specific function: Part of cytochrome c oxidase, its function is unknown [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021050 [H]

Pfam domain/function: PF12270 Cyt_c_ox_IV [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 15572; Mature: 15572

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSAKLMYGLTVFMVAMAVIYIFATMHVNDGGSVPGVEWVGATALVLSAGLTLMLGVYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HFTEVRVDVLPEDWEEAEVADKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAV
HHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLMLLIFTITKLNLQYGVPKEKH
HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKSSAKLMYGLTVFMVAMAVIYIFATMHVNDGGSVPGVEWVGATALVLSAGLTLMLGVYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HFTEVRVDVLPEDWEEAEVADKAGTLGFFSPSSIWPAAMSGAVGFLAFGVVYFHYWMIAV
HHHHHHEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GLMLLIFTITKLNLQYGVPKEKH
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]