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The map label for this gene is ydhO [C]

Identifier: 145296149

GI number: 145296149

Start: 2282806

End: 2283855

Strand: Reverse

Name: ydhO [C]

Synonym: cgR_2069

Alternate gene names: 145296149

Gene position: 2283855-2282806 (Counterclockwise)

Preceding gene: 145296150

Following gene: 145296148

Centisome position: 68.91

GC content: 51.9

Gene sequence:

>1050_bases
TTGAATGAGGTTGATAGGGGATTTTTGAAGATGTTTGGTCGCCGTTGGGTGAGCGTTGTGGCGTCATGTGTTATCGCAAG
CACGCTGATTCTGGTGCCTTCGCATTCCGGTGCGGAGGAAGTCGATCAACTGATTGCTGATATCGAGCATGTCTCTCAGG
AAACGTCTGCCCAGAATGAGGCAGTCAAACAGCTTGAGATTGATATTGAGGCTCGTGAGGTCACGATCAAGGAGGTTCAG
GAGCAGTCGGTAAGCTACCGTGAGGCGGCTGATCAAGCATCGGAGAATGTCGAAGCTTATCGTTCGGAGATCAATCGGAT
CGCTCAGGCGAAGTATCGTGGCACAGTCACGGATCCTTTGAGCATTGCGGTGTCTGCAGAAGATCCACAAAACGTGATTG
ATCGGATGAGCTACCTTTCAACGTTGACTAAGTCCACTAGTGATGTGGTTGAATCCCTCAACGCGGAGACTGAGAAGTCC
GCAGAAGCTGTGTATCAAGCAAACCGTACTAAGGCGGAAGCGGAGTTCCAGTTGGGGCAGCTGAAGGTACGCCAGGCGGA
GCTTGAATCTGAAAAGGAAGCATTGGATGGTCGAAAATCAGAGATCCGAGACCGGGTGGATGCCCTGACGCCACAGGAGC
GGGAAATGTGGGTTGCTAAGAATGGTCCATTGGACATTGATCTGACTGATTTGCTTGGTCTTTCCGCTGCGACTTCGGGT
GCGGTGGATGCTGCCTTGTCTAAGTTGGGAAGCCCTTATGGTTGGGGTGCCATTGGCCCAAATGAGTTTGATTGCTCAGG
TTTGATCTATTGGGCGTATCAGCAGATGGGTAAGACTTTGCCACGTACGTCTCAAGCTCAGATGGCTGGCGGAACGCCGG
TGAGCAGAGATGAGCTGCAGCCTGGCGATGTCATTGGATATTACCCAGGTGCTACTCACGTGGGACTGTATATTGGGGAC
GGAAAGATTGTGCACGCCTCAGACTACGGAATCCCTGTGCAGGTGGTATCTGTTGATTCAGCACCGTTTTATGGTGCGCG
TCGCTACTAA

Upstream 100 bases:

>100_bases
TAAGCTTTTGAAGCAAGCCGCACTCCTTGAAAAAGTTGAGAGCGGCTTGCTTCTTTTCCTTGGCTAGGCTTTCGTGATCG
GGTTAGAGTAGTCGAGTTGC

Downstream 100 bases:

>100_bases
GAAATAGTTCGTCAGGAGAATCTTTGTGTCTGCATCCCGAAAAACTCTCGTTGTGACCAATGATTTTCCTCCACGGATCG
GCGGAATCCAAAGCTATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNEVDRGFLKMFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNEAVKQLEIDIEAREVTIKEVQ
EQSVSYREAADQASENVEAYRSEINRIAQAKYRGTVTDPLSIAVSAEDPQNVIDRMSYLSTLTKSTSDVVESLNAETEKS
AEAVYQANRTKAEAEFQLGQLKVRQAELESEKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSG
AVDAALSKLGSPYGWGAIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQPGDVIGYYPGATHVGLYIGD
GKIVHASDYGIPVQVVSVDSAPFYGARRY

Sequences:

>Translated_349_residues
MNEVDRGFLKMFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNEAVKQLEIDIEAREVTIKEVQ
EQSVSYREAADQASENVEAYRSEINRIAQAKYRGTVTDPLSIAVSAEDPQNVIDRMSYLSTLTKSTSDVVESLNAETEKS
AEAVYQANRTKAEAEFQLGQLKVRQAELESEKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSG
AVDAALSKLGSPYGWGAIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQPGDVIGYYPGATHVGLYIGD
GKIVHASDYGIPVQVVSVDSAPFYGARRY
>Mature_349_residues
MNEVDRGFLKMFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNEAVKQLEIDIEAREVTIKEVQ
EQSVSYREAADQASENVEAYRSEINRIAQAKYRGTVTDPLSIAVSAEDPQNVIDRMSYLSTLTKSTSDVVESLNAETEKS
AEAVYQANRTKAEAEFQLGQLKVRQAELESEKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSG
AVDAALSKLGSPYGWGAIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQPGDVIGYYPGATHVGLYIGD
GKIVHASDYGIPVQVVSVDSAPFYGARRY

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787944, Length=124, Percent_Identity=34.6774193548387, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1786421, Length=128, Percent_Identity=32.03125, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 38072; Mature: 38072

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00782 TFIIB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEVDRGFLKMFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVKQLEIDIEAREVTIKEVQEQSVSYREAADQASENVEAYRSEINRIAQAKYRGTVTDPL
HHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
SIAVSAEDPQNVIDRMSYLSTLTKSTSDVVESLNAETEKSAEAVYQANRTKAEAEFQLGQ
EEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
LKVRQAELESEKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCEEEECCCCCCEEHHHHHCCHHCCCH
AVDAALSKLGSPYGWGAIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCC
PGDVIGYYPGATHVGLYIGDGKIVHASDYGIPVQVVSVDSAPFYGARRY
CCCEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MNEVDRGFLKMFGRRWVSVVASCVIASTLILVPSHSGAEEVDQLIADIEHVSQETSAQNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVKQLEIDIEAREVTIKEVQEQSVSYREAADQASENVEAYRSEINRIAQAKYRGTVTDPL
HHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
SIAVSAEDPQNVIDRMSYLSTLTKSTSDVVESLNAETEKSAEAVYQANRTKAEAEFQLGQ
EEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
LKVRQAELESEKEALDGRKSEIRDRVDALTPQEREMWVAKNGPLDIDLTDLLGLSAATSG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHCEEEECCCCCCEEHHHHHCCHHCCCH
AVDAALSKLGSPYGWGAIGPNEFDCSGLIYWAYQQMGKTLPRTSQAQMAGGTPVSRDELQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCC
PGDVIGYYPGATHVGLYIGDGKIVHASDYGIPVQVVSVDSAPFYGARRY
CCCEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]